|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:2988737..2989780+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008773-T1 ID=KJC3_008773-T1|Name=KJC3_008773-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1044bp|location=Sequence derived from alignment at ch6:2988737..2989780+ (Aspergillus niger KJC3)
ATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGGAGCATTGCAA
CAAGGTATGGATCGACTCGATGCCGCGTTATCTACACCTTCCGCTGCTCT
ATCGCTTGCTTGAGGGTGTTATAGTTCCTGTGCTAATGGCAGTAGTCCTT
CAATCGCAAATCAGATCTGTGCAGGCACTATCGGATACACACCAATGAGC
GACCGTATCATTGCACGGTCAAGGACTGCAATAAAAGCTTCATTCAACGG
AGTGCATTGACAGTGCATTCGCGAACGCATACCGGAGAGAAGCCTCATGT
CTGTGATCACAGAGGATGCCACAAGGCCTTTTCTGACGTATGTGCATCCT
AGCTCACTAATCTTTATGTATGCTGACCACCACAGTCATCGAGTCTCGCT
CGTCACCGAAGGATCCATACTGGAAAGAGGCCCTATATCTGCCAAGAACC
AACATGCGAACGAGCGTAAGCATTGGCCTGGTTCTCGTGCTAATCTCTTA
TCTAACAACGTGAAGCTTCTGCCGCAAAACGACCTTGACCAAGCACCAAC
ACCGCTCTCACCCCCCGGGATCCATGACTCGCCTGCCCTCCGAAGATGCG
GTCTCTGAACACTCGTATCAAGGGCCAGTCGCCGTTCCCGTGCCGAATGA
ACAGTATCTCTTAGCCCAGCAACCCTACTACCCTCATACCCCGACGCCGA
CTCATGAGTTTTACCCCCACCAGAGCCTACACATAACGCCGGTGCCCATA
CAAGAACAACCACCGATCGTGACCCAGCACATCCCTGTCACGTCACCGGT
TGATGTGCAGCGGGCTCAGCAACACTACATGCAGCTTGTGCAGCAACAGC
AACAGCAACAGCAGCGGTACGATCCTGGTCGGCAGGGGTATCTGCCACCG
GAGTTTCAGCAACCATACCATGCTCTACCCACAGCGGATGGTCCACCGCT
GATGGTGACTAGCACTCAGAGTGACTACAAACCGCCGGCCCGCATCCTGA
ACCAGCCCGAGGGAACGGACTGGGGCTTCCTGGGGGTTGGCTAA back to topCoding sequence (CDS) from alignment at ch6:2988737..2989780+ >KJC3_008773-T1 ID=KJC3_008773-T1|Name=KJC3_008773-T1|organism=Aspergillus niger KJC3|type=CDS|length=3420bp|location=Sequence derived from alignment at ch6:2988737..2989780+ (Aspergillus niger KJC3)
ATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGGAGCATTGCAA
CAAGTCCTTCAATCGCAAATCAGATCTGTGCAGGCACTATCGGATACACA
CCAATGAGCGACCGTATCATTGCACGGTCAAGGACTGCAATAAAAGCTTC
ATTCAACGGAGTGCATTGACAGTGCATTCGCGAACGCATACCGGAGAGAA
GCCTCATGTCTGTGATCACAGAGGATGCCACAAGGCCTTTTCTGACTCAT
CGAGTCTCGCTCGTCACCGAAGGATCCATACTGGAAAGAGGCCCTATATC
TGCCAAGAACCAACATGCGAACGAGCCTTCTGCCGCAAAACGACCTTGAC
CAAGCACCAACACCGCTCTCACCCCCCGGGATCCATGACTCGCCTGCCCT
CCGAAGATGCGGTCTCTGAACACTCGTATCAAGGGCCAGTCGCCGTTCCC
GTGCCGAATGAACAGTATCTCTTAGCCCAGCAACCCTACTACCCTCATAC
CCCGACGCCGACTCATGAGTTTTACCCCCACCAGAGCCTACACATAACGC
CGGTGCCCATACAAGAACAACCACCGATCGTGACCCAGCACATCCCTGTC
ACGTCACCGGTTGATGTGCAGCGGGCTCAGCAACACTACATGCAGCTTGT
GCAGCAACAGCAACAGCAACAGCAGCGGTACGATCCTGGTCGGCAGGGGT
ATCTGCCACCGGAGTTTCAGCAACCATACCATGCTCTACCCACAGCGGAT
GGTCCACCGCTGATGGTGACTAGCACTCAGAGTGACTACAAACCGCCGGC
CCGCATCCTGAACCAGCCCGAGGGAACGGACTGGGGCTTCCTGGGGGTTG
GCTAAATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGGAGCAT
TGCAACAAGTCCTTCAATCGCAAATCAGATCTGTGCAGGCACTATCGGAT
ACACACCAATGAGCGACCGTATCATTGCACGGTCAAGGACTGCAATAAAA
GCTTCATTCAACGGAGTGCATTGACAGTGCATTCGCGAACGCATACCGGA
GAGAAGCCTCATGTCTGTGATCACAGAGGATGCCACAAGGCCTTTTCTGA
CTCATCGAGTCTCGCTCGTCACCGAAGGATCCATACTGGAAAGAGGCCCT
ATATCTGCCAAGAACCAACATGCGAACGAGCCTTCTGCCGCAAAACGACC
TTGACCAAGCACCAACACCGCTCTCACCCCCCGGGATCCATGACTCGCCT
GCCCTCCGAAGATGCGGTCTCTGAACACTCGTATCAAGGGCCAGTCGCCG
TTCCCGTGCCGAATGAACAGTATCTCTTAGCCCAGCAACCCTACTACCCT
CATACCCCGACGCCGACTCATGAGTTTTACCCCCACCAGAGCCTACACAT
AACGCCGGTGCCCATACAAGAACAACCACCGATCGTGACCCAGCACATCC
CTGTCACGTCACCGGTTGATGTGCAGCGGGCTCAGCAACACTACATGCAG
CTTGTGCAGCAACAGCAACAGCAACAGCAGCGGTACGATCCTGGTCGGCA
GGGGTATCTGCCACCGGAGTTTCAGCAACCATACCATGCTCTACCCACAG
CGGATGGTCCACCGCTGATGGTGACTAGCACTCAGAGTGACTACAAACCG
CCGGCCCGCATCCTGAACCAGCCCGAGGGAACGGACTGGGGCTTCCTGGG
GGTTGGCTAAATGGCGCCTGGTGGTGGACGAGATTTTAACTGCACCTGGG
AGCATTGCAACAAGTCCTTCAATCGCAAATCAGATCTGTGCAGGCACTAT
CGGATACACACCAATGAGCGACCGTATCATTGCACGGTCAAGGACTGCAA
TAAAAGCTTCATTCAACGGAGTGCATTGACAGTGCATTCGCGAACGCATA
CCGGAGAGAAGCCTCATGTCTGTGATCACAGAGGATGCCACAAGGCCTTT
TCTGACTCATCGAGTCTCGCTCGTCACCGAAGGATCCATACTGGAAAGAG
GCCCTATATCTGCCAAGAACCAACATGCGAACGAGCCTTCTGCCGCAAAA
CGACCTTGACCAAGCACCAACACCGCTCTCACCCCCCGGGATCCATGACT
CGCCTGCCCTCCGAAGATGCGGTCTCTGAACACTCGTATCAAGGGCCAGT
CGCCGTTCCCGTGCCGAATGAACAGTATCTCTTAGCCCAGCAACCCTACT
ACCCTCATACCCCGACGCCGACTCATGAGTTTTACCCCCACCAGAGCCTA
CACATAACGCCGGTGCCCATACAAGAACAACCACCGATCGTGACCCAGCA
CATCCCTGTCACGTCACCGGTTGATGTGCAGCGGGCTCAGCAACACTACA
TGCAGCTTGTGCAGCAACAGCAACAGCAACAGCAGCGGTACGATCCTGGT
CGGCAGGGGTATCTGCCACCGGAGTTTCAGCAACCATACCATGCTCTACC
CACAGCGGATGGTCCACCGCTGATGGTGACTAGCACTCAGAGTGACTACA
AACCGCCGGCCCGCATCCTGAACCAGCCCGAGGGAACGGACTGGGGCTTC
CTGGGGGTTGGCTAAATGGCGCCTGGTGGTGGACGAGATTTTAACTGCAC
CTGGGAGCATTGCAACAAGTCCTTCAATCGCAAATCAGATCTGTGCAGGC
ACTATCGGATACACACCAATGAGCGACCGTATCATTGCACGGTCAAGGAC
TGCAATAAAAGCTTCATTCAACGGAGTGCATTGACAGTGCATTCGCGAAC
GCATACCGGAGAGAAGCCTCATGTCTGTGATCACAGAGGATGCCACAAGG
CCTTTTCTGACTCATCGAGTCTCGCTCGTCACCGAAGGATCCATACTGGA
AAGAGGCCCTATATCTGCCAAGAACCAACATGCGAACGAGCCTTCTGCCG
CAAAACGACCTTGACCAAGCACCAACACCGCTCTCACCCCCCGGGATCCA
TGACTCGCCTGCCCTCCGAAGATGCGGTCTCTGAACACTCGTATCAAGGG
CCAGTCGCCGTTCCCGTGCCGAATGAACAGTATCTCTTAGCCCAGCAACC
CTACTACCCTCATACCCCGACGCCGACTCATGAGTTTTACCCCCACCAGA
GCCTACACATAACGCCGGTGCCCATACAAGAACAACCACCGATCGTGACC
CAGCACATCCCTGTCACGTCACCGGTTGATGTGCAGCGGGCTCAGCAACA
CTACATGCAGCTTGTGCAGCAACAGCAACAGCAACAGCAGCGGTACGATC
CTGGTCGGCAGGGGTATCTGCCACCGGAGTTTCAGCAACCATACCATGCT
CTACCCACAGCGGATGGTCCACCGCTGATGGTGACTAGCACTCAGAGTGA
CTACAAACCGCCGGCCCGCATCCTGAACCAGCCCGAGGGAACGGACTGGG
GCTTCCTGGGGGTTGGCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:2988737..2989780 + |
|
