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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3013296..3017194+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008780-T1 ID=KJC3_008780-T1|Name=KJC3_008780-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3899bp|location=Sequence derived from alignment at ch6:3013296..3017194+ (Aspergillus niger KJC3)
CCCAACCACTCTGCCTCATCCATCAACCCGCCATGCCTTGCTAGTTTTCC
ATTTTTTCTTCTTCTCGGCCTTAATTCAATCTGGTCGCTATTGTCCTTCT
TTATGTGGTTGTGCCAATAGCCATCTCTGTCTAACCCCATAGAAGGAAAG
GGTGGTGTCCAGCTCACCTCTTTGCTTCTCACTGTCCTAGGAGCCCTAGC
CACCACAAGCCTTGCTTCCTTGCCGGAGCACCTAGGCCCATCCTATCCTT
GTCGCCCTTTTGTCTGAACGGAGGGGCCTCAAGGAGGCTAGAGAAACTGA
GCTAGGCAAATTTCCCAGCGAACCCATGGCGAGGGACACCGCGCAAACTC
CGATCATCCCTCGTCCCCGGCTGCTTCAGGGCGCCGCCAGTTATCCCTCC
GATCTCACCGCCCCCTCGCTGTCTGCGCCCTTCAAGCTCGACGAGGGTTA
TTCCGATGAAACGAGAAGCCAGCCCGACAAGGAGTTTTTGAATTCGCCCC
CCGATGATGTGATGCCGCTCCCCGACTGGGTTAATGCTTATAGTGAGGCC
GAGCGAGCCGGTGAGTTCAGCCCCCCTTCCCTTGGTCCCGTCCGGCGCAA
GGCTCCTCTTCTGTTTGGCTTCTTTAGCGCGATCATCATCGTACTGACAG
GCTGTGGTGTTTCATGTAGAGCTCGCCTACAAGCTTCTACGCACCTTGCG
TGCTTCCACTGTCGCCTCGGTGGTTGAAAAGCTAGCGCCTCTATTGCACA
TGGATCCCGTGCTGAAATTACCTCCGGAGATCACCGCCGAGATCTTTTCC
TACCTCGACCCTCAAACGTTGGTAACGGCTTCCTTGGCATCTCGCTCCTG
GCGTAGTCGCATTTTTGACACCCGCCTTTGGAGAGACTTATATATCAGCG
AAGGCTGGCGGGTCGACATTGACGCCGTGCATACGTACGAACAGGAACAC
TCGGGATTGGAATCCCCCCAGCTCCGAAAATCTCGGTTGAGGCATATAGA
CCCGGATCTCGGTGAACCGAAACAGAAGAAGCGCGTACCCCCCAGCTGGC
TAGACTCTCGCGCAGCAGGATCACTGGATAACAATGAGGCCGTGCAAGGA
AATGGGCTGCAGCCCTCCGCAGCGGCGGATATTGAAGGCGATCATCCCAT
GAGTGATGCGTCAAACGATCGAGGACCGGCGATCGCACCTGGGCAACAAT
CATCTAGCGCCCGCCATGAGTCGTCAGGAACTGCCCAATCGAAGTCACAT
TTGCAGCAAATTTCTACGAACTCTAGCCCCCCCAAATCGCCACTATTAAT
TCGAATGCCCAATGGCGCTGCAAAGATGAATTGGCCGCATCTGTATCGGG
TACGGAGGCGGCTGGAAGAGAACTGGGCCAAGGGCCGTTTCACGAACTTT
CAACTGCCCCATCCGAATCACATGGAAGAATCTCACCAAGAGTGTGTATA
TGCGATCCAGTTTACCGAGAAATGGTTGGTCAGTGGTAGTCGGGATAAGA
CTGTTCGAGTATGGGACCTGGACACGAAGCGACTATGGCATCCGCCTCTC
CAAGGCCACTCAAAATCGGTTCTCTGTCTTCAGTTCGACCCCCGCCCATC
TGAAGATATCATTGTGTCGGGAAGCAGCGACAAGAATGTGATAATTTGGC
GCTTTTCCACTGGAGAGAAGCTTCACGAAATTGCGCCAGCTCATGATGAC
TCTGTCCTGAATCTCCGATTCGACGAACGCTATATAGTAACTTGCTCCAA
GGACAAGCTTATCAAGGTCTGGAACAGGCGTCATCTCAGTCCGTTGGACA
AGGACTACCCCTCTGTTTTTCAGGGCTCGGGCGTCTCCTATCCGTCGTAT
ATTGTCAACACAAGCGACGTCCCCGCTTTCGTACTTGAAGCCGAAATCGC
CAAGAATCACATCAGAACTTTAGCCCCATACTCATTGCTAATGATCCTTG
ACGGACATACAGCCGCAGTGAATGCTATTCAGCTCAACGAGGATGAGATC
GTGTCCGCCTCGGGCGATCGCTTGATCAAGGTCTGGAATCTGCGCAACGG
CGCTTGTAGAAAGACAATGATAGGCCACGAAAAAGGCATTGCGTGCGTGC
AGTTCGACAGCAAACGTATAATCAGCGGAAGCAACGATGATACAGTTCGC
ATTTTCGACCACGCCTCCGGTGCCGAAGTGGCCTGCCTGCACGGACATGC
CAACCTCGTTCGGACAGTTCAAGCTGGTTTCGGAGACCCACCGGGAGCCG
AGGAGGCCTTACGACTGGAAGCTCTGGCTGTCGACAACGAGTTCCGTGAC
GCCCAGCGCACCAACGCAAACGTTGACCTTGGCCCTAGTGCCCTTCGGCG
CGCAGGATATCAGCAGAACACCAACGGGTCTCGGAACCCCAGAGACATCA
AAGCACTGGGCGCCAAAATCCCTCCAGGGGGAGGCGGAAGCCAATGGGGA
CGAATCGTCTCCGGCTCATACGACGAGACCATCATCATCTGGAAAAAGGA
TAATGAAGGCCGCTGGGTTGTAGGCCAGAGACTCCGACAGGCAGACGCCG
CTGCGAATGCCTCATACAGCCACTTAGATTCCGCTGCACGCCAGACAATC
GTACGAGCCAACGCCTTTGCTCAAGCGCACCAGGCGCAACAAGCCCAAGC
TACCATGGCAGCCGCCGCGATATCAGCAGGCGGTGGAGCACCACAGCAAG
GCCAGAACCAGCAGCATCAAACACAACCACCACGATTGCCTACAACCAAC
TCCAACACCCACGACCCCTCATCACATAATGCACCCTGGCCCGCGCACCT
AGCCTTGAACCCGGCCCTCCTCATCTCCAACAACCTTCCCCCCACCGTCC
AGCAAAGCACATCTCAAGCTCAAGCTCAAGCTCCAGCTCCCCCGCCCATC
ATGCATGCCGGCGCTCCAATGAGACCACCACCACTACCACCGCATGCTCA
GCAACAGCAACACCCCCGAGTGAGAGCCTTCCCTGCCGCCCCCCACCAAC
CACCTACCTCGAGGATCTTCAAGCTCCAATTCGACGCGCACAAGATAATT
TGCGCAAGCCAGGACCCGAGAATAGTAGGGTGGGATTTTACTGCTGATGA
TGAGGAACTCAAAGAGGCGTGTCAGTTCTTTAAGGGGCTGTGACCGTCGT
ATATAACTATCGTCAACGTTGGGGAAAGATGATGTGGTATAATATTCGGT
CTAAGTTATATTCAGTCCTAAGTGGCTCATGAAGATATTCTTTTCGTTTT
CTTCTTATCATTTCATTTTCCAAAATATCTCCTTTTCATTTCTCTTGTGC
ATTAGGAGCCTGTTCTATGTTTTTTTGTCTCTTTTCTTTTATCATTGCCC
CATGGGTGATCTGTCTATATTGCATGAGAATCATCTCGCTTATTCGCCTC
TTCTTCTTGTGGAGAATTTATCTATGTGTGTGGGTGGGCCTTGACAGGCC
TTGTCGTGTTCTGTTCATAACTCTTATCTTTAGAGCATTTCGGCATCGGA
GCGATGGAGTCGGTTGGTTCATGTCAGCAGAGACGAAATGACTACAGCTT
GTTGTTCGCTTATGACATTGATAATGACTTTGCCAATAATGAAGACTTGA
AGTATGCAGTCACATTTCTACAGGCTAGCGCTAGTAATTCGAACAATTGA
GACAAGACCCCTGGATGAATGCGCGCCTTGCATATGTGCCATTCGATGAG
CGTTGGAAAACGGAGAAAGGTTCAAATGTATCTGGCGCATCCCAATCCAA
TAAATGAGCTAATGAAAGAACAGTCGTCACAAGTATGCAGGTTATGGTCC
AAGCAATCATTGGTATATGAATCAGGCCGACATCGGGCTTGTGGCTGGAG
AGTTGCGAAAAGGAAACGTTTGGAGCGACCTCCAAGCTCCAGAAAACCA back to topCoding sequence (CDS) from alignment at ch6:3013296..3017194+ >KJC3_008780-T1 ID=KJC3_008780-T1|Name=KJC3_008780-T1|organism=Aspergillus niger KJC3|type=CDS|length=5418bp|location=Sequence derived from alignment at ch6:3013296..3017194+ (Aspergillus niger KJC3)
ATGGCGAGGGACACCGCGCAAACTCCGATCATCCCTCGTCCCCGGCTGCT
TCAGGGCGCCGCCAGTTATCCCTCCGATCTCACCGCCCCCTCGCTGTCTG
CGCCCTTCAAGCTCGACGAGGGTTATTCCGATGAAACGAGAAGCCAGCCC
GACAAGGAGTTTTTGAATTCGCCCCCCGATGATGTGATGCCGCTCCCCGA
CTGGGTTAATGCTTATAGTGAGGCCGAGCGAGCCGAGCTCGCCTACAAGC
TTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCGGTGGTTGAAAAGCTA
GCGCCTCTATTGCACATGGATCCCGTGCTGAAATTACCTCCGGAGATCAC
CGCCGAGATCTTTTCCTACCTCGACCCTCAAACGTTGGTAACGGCTTCCT
TGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGACACCCGCCTTTGGAGA
GACTTATATATCAGCGAAGGCTGGCGGGTCGACATTGACGCCGTGCATAC
GTACGAACAGGAACACTCGGGATTGGAATCCCCCCAGCTCCGAAAATCTC
GGTTGAGGCATATAGACCCGGATCTCGGTGAACCGAAACAGAAGAAGCGC
GTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGGATCACTGGATAACAA
TGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCGCAGCGGCGGATATTG
AAGGCGATCATCCCATGAGTGATGCGTCAAACGATCGAGGACCGGCGATC
GCACCTGGGCAACAATCATCTAGCGCCCGCCATGAGTCGTCAGGAACTGC
CCAATCGAAGTCACATTTGCAGCAAATTTCTACGAACTCTAGCCCCCCCA
AATCGCCACTATTAATTCGAATGCCCAATGGCGCTGCAAAGATGAATTGG
CCGCATCTGTATCGGGTACGGAGGCGGCTGGAAGAGAACTGGGCCAAGGG
CCGTTTCACGAACTTTCAACTGCCCCATCCGAATCACATGGAAGAATCTC
ACCAAGAGTGTGTATATGCGATCCAGTTTACCGAGAAATGGTTGGTCAGT
GGTAGTCGGGATAAGACTGTTCGAGTATGGGACCTGGACACGAAGCGACT
ATGGCATCCGCCTCTCCAAGGCCACTCAAAATCGGTTCTCTGTCTTCAGT
TCGACCCCCGCCCATCTGAAGATATCATTGTGTCGGGAAGCAGCGACAAG
AATGTGATAATTTGGCGCTTTTCCACTGGAGAGAAGCTTCACGAAATTGC
GCCAGCTCATGATGACTCTGTCCTGAATCTCCGATTCGACGAACGCTATA
TAGTAACTTGCTCCAAGGACAAGCTTATCAAGGTCTGGAACAGGCGTCAT
CTCAGTCCGTTGGACAAGGACTACCCCTCTGTTTTTCAGGGCTCGGGCGT
CTCCTATCCGTCGTATATTGTCAACACAAGCGACGTCCCCGCTTTCGTAC
TTGAAGCCGAAATCGCCAAGAATCACATCAGAACTTTAGCCCCATACTCA
TTGCTAATGATCCTTGACGGACATACAGCCGCAGTGAATGCTATTCAGCT
CAACGAGGATGAGATCGTGTCCGCCTCGGGCGATCGCTTGATCAAGGTCT
GGAATCTGCGCAACGGCGCTTGTAGAAAGACAATGATAGGCCACGAAAAA
GGCATTGCGTGCGTGCAGTTCGACAGCAAACGTATAATCAGCGGAAGCAA
CGATGATACAGTTCGCATTTTCGACCACGCCTCCGGTGCCGAAGTGGCCT
GCCTGCACGGACATGCCAACCTCGTTCGGACAGTTCAAGCTGGTTTCGGA
GACCCACCGGGAGCCGAGGAGGCCTTACGACTGGAAGCTCTGGCTGTCGA
CAACGAGTTCCGTGACGCCCAGCGCACCAACGCAAACGTTGACCTTGGCC
CTAGTGCCCTTCGGCGCGCAGGATATCAGCAGAACACCAACGGGTCTCGG
AACCCCAGAGACATCAAAGCACTGGGCGCCAAAATCCCTCCAGGGGGAGG
CGGAAGCCAATGGGGACGAATCGTCTCCGGCTCATACGACGAGACCATCA
TCATCTGGAAAAAGGATAATGAAGGCCGCTGGGTTGTAGGCCAGAGACTC
CGACAGGCAGACGCCGCTGCGAATGCCTCATACAGCCACTTAGATTCCGC
TGCACGCCAGACAATCGTACGAGCCAACGCCTTTGCTCAAGCGCACCAGG
CGCAACAAGCCCAAGCTACCATGGCAGCCGCCGCGATATCAGCAGGCGGT
GGAGCACCACAGCAAGGCCAGAACCAGCAGCATCAAACACAACCACCACG
ATTGCCTACAACCAACTCCAACACCCACGACCCCTCATCACATAATGCAC
CCTGGCCCGCGCACCTAGCCTTGAACCCGGCCCTCCTCATCTCCAACAAC
CTTCCCCCCACCGTCCAGCAAAGCACATCTCAAGCTCAAGCTCAAGCTCC
AGCTCCCCCGCCCATCATGCATGCCGGCGCTCCAATGAGACCACCACCAC
TACCACCGCATGCTCAGCAACAGCAACACCCCCGAGTGAGAGCCTTCCCT
GCCGCCCCCCACCAACCACCTACCTCGAGGATCTTCAAGCTCCAATTCGA
CGCGCACAAGATAATTTGCGCAAGCCAGGACCCGAGAATAGTAGGGTGGG
ATTTTACTGCTGATGATGAGGAACTCAAAGAGGCGTGTCAGTTCTTTAAG
GGGCTGTGAATGGCGAGGGACACCGCGCAAACTCCGATCATCCCTCGTCC
CCGGCTGCTTCAGGGCGCCGCCAGTTATCCCTCCGATCTCACCGCCCCCT
CGCTGTCTGCGCCCTTCAAGCTCGACGAGGGTTATTCCGATGAAACGAGA
AGCCAGCCCGACAAGGAGTTTTTGAATTCGCCCCCCGATGATGTGATGCC
GCTCCCCGACTGGGTTAATGCTTATAGTGAGGCCGAGCGAGCCGAGCTCG
CCTACAAGCTTCTACGCACCTTGCGTGCTTCCACTGTCGCCTCGGTGGTT
GAAAAGCTAGCGCCTCTATTGCACATGGATCCCGTGCTGAAATTACCTCC
GGAGATCACCGCCGAGATCTTTTCCTACCTCGACCCTCAAACGTTGGTAA
CGGCTTCCTTGGCATCTCGCTCCTGGCGTAGTCGCATTTTTGACACCCGC
CTTTGGAGAGACTTATATATCAGCGAAGGCTGGCGGGTCGACATTGACGC
CGTGCATACGTACGAACAGGAACACTCGGGATTGGAATCCCCCCAGCTCC
GAAAATCTCGGTTGAGGCATATAGACCCGGATCTCGGTGAACCGAAACAG
AAGAAGCGCGTACCCCCCAGCTGGCTAGACTCTCGCGCAGCAGGATCACT
GGATAACAATGAGGCCGTGCAAGGAAATGGGCTGCAGCCCTCCGCAGCGG
CGGATATTGAAGGCGATCATCCCATGAGTGATGCGTCAAACGATCGAGGA
CCGGCGATCGCACCTGGGCAACAATCATCTAGCGCCCGCCATGAGTCGTC
AGGAACTGCCCAATCGAAGTCACATTTGCAGCAAATTTCTACGAACTCTA
GCCCCCCCAAATCGCCACTATTAATTCGAATGCCCAATGGCGCTGCAAAG
ATGAATTGGCCGCATCTGTATCGGGTACGGAGGCGGCTGGAAGAGAACTG
GGCCAAGGGCCGTTTCACGAACTTTCAACTGCCCCATCCGAATCACATGG
AAGAATCTCACCAAGAGTGTGTATATGCGATCCAGTTTACCGAGAAATGG
TTGGTCAGTGGTAGTCGGGATAAGACTGTTCGAGTATGGGACCTGGACAC
GAAGCGACTATGGCATCCGCCTCTCCAAGGCCACTCAAAATCGGTTCTCT
GTCTTCAGTTCGACCCCCGCCCATCTGAAGATATCATTGTGTCGGGAAGC
AGCGACAAGAATGTGATAATTTGGCGCTTTTCCACTGGAGAGAAGCTTCA
CGAAATTGCGCCAGCTCATGATGACTCTGTCCTGAATCTCCGATTCGACG
AACGCTATATAGTAACTTGCTCCAAGGACAAGCTTATCAAGGTCTGGAAC
AGGCGTCATCTCAGTCCGTTGGACAAGGACTACCCCTCTGTTTTTCAGGG
CTCGGGCGTCTCCTATCCGTCGTATATTGTCAACACAAGCGACGTCCCCG
CTTTCGTACTTGAAGCCGAAATCGCCAAGAATCACATCAGAACTTTAGCC
CCATACTCATTGCTAATGATCCTTGACGGACATACAGCCGCAGTGAATGC
TATTCAGCTCAACGAGGATGAGATCGTGTCCGCCTCGGGCGATCGCTTGA
TCAAGGTCTGGAATCTGCGCAACGGCGCTTGTAGAAAGACAATGATAGGC
CACGAAAAAGGCATTGCGTGCGTGCAGTTCGACAGCAAACGTATAATCAG
CGGAAGCAACGATGATACAGTTCGCATTTTCGACCACGCCTCCGGTGCCG
AAGTGGCCTGCCTGCACGGACATGCCAACCTCGTTCGGACAGTTCAAGCT
GGTTTCGGAGACCCACCGGGAGCCGAGGAGGCCTTACGACTGGAAGCTCT
GGCTGTCGACAACGAGTTCCGTGACGCCCAGCGCACCAACGCAAACGTTG
ACCTTGGCCCTAGTGCCCTTCGGCGCGCAGGATATCAGCAGAACACCAAC
GGGTCTCGGAACCCCAGAGACATCAAAGCACTGGGCGCCAAAATCCCTCC
AGGGGGAGGCGGAAGCCAATGGGGACGAATCGTCTCCGGCTCATACGACG
AGACCATCATCATCTGGAAAAAGGATAATGAAGGCCGCTGGGTTGTAGGC
CAGAGACTCCGACAGGCAGACGCCGCTGCGAATGCCTCATACAGCCACTT
AGATTCCGCTGCACGCCAGACAATCGTACGAGCCAACGCCTTTGCTCAAG
CGCACCAGGCGCAACAAGCCCAAGCTACCATGGCAGCCGCCGCGATATCA
GCAGGCGGTGGAGCACCACAGCAAGGCCAGAACCAGCAGCATCAAACACA
ACCACCACGATTGCCTACAACCAACTCCAACACCCACGACCCCTCATCAC
ATAATGCACCCTGGCCCGCGCACCTAGCCTTGAACCCGGCCCTCCTCATC
TCCAACAACCTTCCCCCCACCGTCCAGCAAAGCACATCTCAAGCTCAAGC
TCAAGCTCCAGCTCCCCCGCCCATCATGCATGCCGGCGCTCCAATGAGAC
CACCACCACTACCACCGCATGCTCAGCAACAGCAACACCCCCGAGTGAGA
GCCTTCCCTGCCGCCCCCCACCAACCACCTACCTCGAGGATCTTCAAGCT
CCAATTCGACGCGCACAAGATAATTTGCGCAAGCCAGGACCCGAGAATAG
TAGGGTGGGATTTTACTGCTGATGATGAGGAACTCAAAGAGGCGTGTCAG
TTCTTTAAGGGGCTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008780-T1.utr5p1 | KJC3_008780-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008780-T1.utr3p1 | KJC3_008780-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3013296..3017194 + |
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