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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3088229..3090461+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008801-T1 ID=KJC3_008801-T1|Name=KJC3_008801-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2233bp|location=Sequence derived from alignment at ch6:3088229..3090461+ (Aspergillus niger KJC3)
AGACATACTGACAAGTTTCCATGATGCAGGAGAAGAAGCGAAGAGTGAGA
ACGAAGATAGCAACACGCGGTCCGGCGCCATAAGCCTCATACGAGCGCGG
ACTATTTCTCGATCATCAACACCAAGGGATACCCAAGAAGGCTGTTCTAG
CGAGCAAGCTGACGACAGCCAACGGGCTGTTTCAATTCCCCGGATTGTGG
TGATGGAACCTCCTGGGGATTCAAAGGCCAAAAGGAATAAGAAGAAGAAG
AATAAGTACAAGAAGAAGAAACTCCTGCTAGGTGATTCCGAAAGCGAGAC
TTCTGGGAGCCAGGGCTCTGGATTGAACGGTAAGCCTACCGCGGAATCGA
ATACTTCGAATGATATTTCGTCTCATATGAAAGAAATAGAGGACTTGTCT
CACTTTGCTTGGATGCCAGCCAAAGGCCTGAACTCTGGCGGCTGTGCAAA
TCAAGAAAAGCCCATGTCAGGCAGCAATGTGTCTCAGAGATGTACAGTGG
ACAGTGACAAGAAGCGAGATTTGATAGAGTCACTAAGCAAGTTGGACATC
AAAGGCAAGCAGCGGGTCTGGCAAGTGAACGCAGTCACAGGCAACGATAC
ATTGGAGGACATAAATACACAGCGTGGTCCCCAACCGGTGGACAAGGCGA
GAAGAACTGTGCTCGCTCCTTCATATGCCACGGTTCTTTCTGGAAAACGT
GCCAGTATCGAGGGTCCATCTTCTATGCCAAACAACAGTGATTCCCTCCT
ACCGACGACCATGGAATTCCCCAAACTCACAGACAAGACCTCCGCCGGAC
AGGATAGTAATTCTGAAGCACGCTCCGGCCATGCAAAGCTCTCTCCTATT
CCGGAAATATCAGGTGAATTTGCAGGTGATAACTCCAACGACATACCGCT
CAGTCAAACGGACCTAGAAACCGCAGGTTCCAGTTCACTTGACAACCCAA
TCTCGACCCCTGTGTCCACAGTATCCACTGGCTGGAGCAGCACAGCACTG
CAAATCAGCCCACAAACGACTGAGCCGTCTTCTGAACCATCCTCGTCCAA
GGCAGTCAGCCATCGCCACGCCACTAGTCTTCACCACGCCCATCCCCTAC
CACCCACACCCCCAAGTAGCACCCATTCCCACTCCCTGTCGACAGCCAAC
GCTACCATAACTAACGCCCAGGGCACCCTCTCCGCCCAGAAACCAGAGGG
GTTCTTTTGGCAACTTGACAGCCACGGCTTCCCCTGTGCCAAAGCCCACT
GCGAGAAACGCTGCAACCTCTGGGACGGAGCAACAGTGATCTGTCCACGA
TGCGGGCCCTACTCCGAAGTACGGTATTGCAGTAGAGCCCACCTACTTGA
GGACATCAAACCTCACTGGCTCTACTGCGGACAGATGGTATTTCAACACC
CATGTCGTGAAACCTCAATCCCAAGACGAGTCCGCGCTGGACCTCCTCTC
ATCCCGTGCCTGCATCACTACGACATGCCGGAGCGTCATCGCCAAGCCGT
GCACTTCAATATGAATGCCAGAGAAGGCGATTACTTCATCTTCACGGACT
GGCTGGATTTTGTTACCGCCGGACTACCAGGTGATAAAACGGCTATACGA
TGTTCGAATAGAATAATGTACGTGGTTAAATTTGATGATGCGGCAGAGAA
AGATCGATTCCGTCGTGTTCTGGCGGCTTGCCTCTTTAGTGAGATCCCTA
CCTTCTTCCTCTTCTAATTTACAGACAACTAACCAACCCCGAAATACATA
GTGACCATCGAACTCCCTGATCTGACCGACTATCTTTACCGTCTAATCCG
CGACAAACTGCGCCTGGCCAACGCTCCCAACCACATTGAACCCTCCCTGC
GCTACCAATTCCTGCAAGAATTTAATGTGACCATCCAAGAGCGCATCACT
GGCTCTCGTCACGCCTGTGAAACAGACTGGGACGGCCGAAACCGCCGTAA
TTGTCAGGATCCGGTGTGTCGGGCTGAGTATCGTCGGCTGCTAGGATCCG
TTGGTGGAAGAGGATACAGTCGGATGATTGAGACGCTCGAGTCAACTTAT
TGGATTCTGAGGGCAGCCAGGACGACCCACCCTAGTGTGAAGGATGCGAT
GAAACGTATGATGGGGGAGGGGTATGCGGAGGTGGCGGAGGAAGATAGAC
GGGCCTTTAGAAGGGGGGATGGGTGGGATGGGGCGGGTTCGGGTGATATG
GAGATAGAGGGGTTTAATGAGGGGGATGAGTAG back to topCoding sequence (CDS) from alignment at ch6:3088229..3090461+ >KJC3_008801-T1 ID=KJC3_008801-T1|Name=KJC3_008801-T1|organism=Aspergillus niger KJC3|type=CDS|length=5724bp|location=Sequence derived from alignment at ch6:3088229..3090461+ (Aspergillus niger KJC3)
ATGGAACCTCCTGGGGATTCAAAGGCCAAAAGGAATAAGAAGAAGAAGAA
TAAGTACAAGAAGAAGAAACTCCTGCTAGGTGATTCCGAAAGCGAGACTT
CTGGGAGCCAGGGCTCTGGATTGAACGAGGACTTGTCTCACTTTGCTTGG
ATGCCAGCCAAAGGCCTGAACTCTGGCGGCTGTGCAAATCAAGAAAAGCC
CATGTCAGGCAGCAATGTGTCTCAGAGATGTACAGTGGACAGTGACAAGA
AGCGAGATTTGATAGAGTCACTAAGCAAGTTGGACATCAAAGGCAAGCAG
CGGGTCTGGCAAGTGAACGCAGTCACAGGCAACGATACATTGGAGGACAT
AAATACACAGCGTGGTCCCCAACCGGTGGACAAGGCGAGAAGAACTGTGC
TCGCTCCTTCATATGCCACGGTTCTTTCTGGAAAACGTGCCAGTATCGAG
GGTCCATCTTCTATGCCAAACAACAGTGATTCCCTCCTACCGACGACCAT
GGAATTCCCCAAACTCACAGACAAGACCTCCGCCGGACAGGATAGTAATT
CTGAAGCACGCTCCGGCCATGCAAAGCTCTCTCCTATTCCGGAAATATCA
GGTGAATTTGCAGGTGATAACTCCAACGACATACCGCTCAGTCAAACGGA
CCTAGAAACCGCAGGTTCCAGTTCACTTGACAACCCAATCTCGACCCCTG
TGTCCACAGTATCCACTGGCTGGAGCAGCACAGCACTGCAAATCAGCCCA
CAAACGACTGAGCCGTCTTCTGAACCATCCTCGTCCAAGGCAGTCAGCCA
TCGCCACGCCACTAGTCTTCACCACGCCCATCCCCTACCACCCACACCCC
CAAGTAGCACCCATTCCCACTCCCTGTCGACAGCCAACGCTACCATAACT
AACGCCCAGGGCACCCTCTCCGCCCAGAAACCAGAGGGGTTCTTTTGGCA
ACTTGACAGCCACGGCTTCCCCTGTGCCAAAGCCCACTGCGAGAAACGCT
GCAACCTCTGGGACGGAGCAACAGTGATCTGTCCACGATGCGGGCCCTAC
TCCGAAGTACGGTATTGCAGTAGAGCCCACCTACTTGAGGACATCAAACC
TCACTGGCTCTACTGCGGACAGATGGTATTTCAACACCCATGTCGTGAAA
CCTCAATCCCAAGACGAGTCCGCGCTGGACCTCCTCTCATCCCGTGCCTG
CATCACTACGACATGCCGGAGCGTCATCGCCAAGCCGTGCACTTCAATAT
GAATGCCAGAGAAGGCGATTACTTCATCTTCACGGACTGGCTGGATTTTG
TTACCGCCGGACTACCAGGTGATAAAACGGCTATACGATGTTCGAATAGA
ATAATGTACGTGGTTAAATTTGATGATGCGGCAGAGAAAGATCGATTCCG
TCGTGTTCTGGCGGCTTGCCTCTTTATGACCATCGAACTCCCTGATCTGA
CCGACTATCTTTACCGTCTAATCCGCGACAAACTGCGCCTGGCCAACGCT
CCCAACCACATTGAACCCTCCCTGCGCTACCAATTCCTGCAAGAATTTAA
TGTGACCATCCAAGAGCGCATCACTGGCTCTCGTCACGCCTGTGAAACAG
ACTGGGACGGCCGAAACCGCCGTAATTGTCAGGATCCGGTGTGTCGGGCT
GAGTATCGTCGGCTGCTAGGATCCGTTGGTGGAAGAGGATACAGTCGGAT
GATTGAGACGCTCGAGTCAACTTATTGGATTCTGAGGGCAGCCAGGACGA
CCCACCCTAGTGTGAAGGATGCGATGAAACGTATGATGGGGGAGGGGTAT
GCGGAGGTGGCGGAGGAAGATAGACGGGCCTTTAGAAGGGGGGATGGGTG
GGATGGGGCGGGTTCGGGTGATATGGAGATAGAGGGGTTTAATGAGGGGG
ATGAGTAGATGGAACCTCCTGGGGATTCAAAGGCCAAAAGGAATAAGAAG
AAGAAGAATAAGTACAAGAAGAAGAAACTCCTGCTAGGTGATTCCGAAAG
CGAGACTTCTGGGAGCCAGGGCTCTGGATTGAACGAGGACTTGTCTCACT
TTGCTTGGATGCCAGCCAAAGGCCTGAACTCTGGCGGCTGTGCAAATCAA
GAAAAGCCCATGTCAGGCAGCAATGTGTCTCAGAGATGTACAGTGGACAG
TGACAAGAAGCGAGATTTGATAGAGTCACTAAGCAAGTTGGACATCAAAG
GCAAGCAGCGGGTCTGGCAAGTGAACGCAGTCACAGGCAACGATACATTG
GAGGACATAAATACACAGCGTGGTCCCCAACCGGTGGACAAGGCGAGAAG
AACTGTGCTCGCTCCTTCATATGCCACGGTTCTTTCTGGAAAACGTGCCA
GTATCGAGGGTCCATCTTCTATGCCAAACAACAGTGATTCCCTCCTACCG
ACGACCATGGAATTCCCCAAACTCACAGACAAGACCTCCGCCGGACAGGA
TAGTAATTCTGAAGCACGCTCCGGCCATGCAAAGCTCTCTCCTATTCCGG
AAATATCAGGTGAATTTGCAGGTGATAACTCCAACGACATACCGCTCAGT
CAAACGGACCTAGAAACCGCAGGTTCCAGTTCACTTGACAACCCAATCTC
GACCCCTGTGTCCACAGTATCCACTGGCTGGAGCAGCACAGCACTGCAAA
TCAGCCCACAAACGACTGAGCCGTCTTCTGAACCATCCTCGTCCAAGGCA
GTCAGCCATCGCCACGCCACTAGTCTTCACCACGCCCATCCCCTACCACC
CACACCCCCAAGTAGCACCCATTCCCACTCCCTGTCGACAGCCAACGCTA
CCATAACTAACGCCCAGGGCACCCTCTCCGCCCAGAAACCAGAGGGGTTC
TTTTGGCAACTTGACAGCCACGGCTTCCCCTGTGCCAAAGCCCACTGCGA
GAAACGCTGCAACCTCTGGGACGGAGCAACAGTGATCTGTCCACGATGCG
GGCCCTACTCCGAAGTACGGTATTGCAGTAGAGCCCACCTACTTGAGGAC
ATCAAACCTCACTGGCTCTACTGCGGACAGATGGTATTTCAACACCCATG
TCGTGAAACCTCAATCCCAAGACGAGTCCGCGCTGGACCTCCTCTCATCC
CGTGCCTGCATCACTACGACATGCCGGAGCGTCATCGCCAAGCCGTGCAC
TTCAATATGAATGCCAGAGAAGGCGATTACTTCATCTTCACGGACTGGCT
GGATTTTGTTACCGCCGGACTACCAGGTGATAAAACGGCTATACGATGTT
CGAATAGAATAATGTACGTGGTTAAATTTGATGATGCGGCAGAGAAAGAT
CGATTCCGTCGTGTTCTGGCGGCTTGCCTCTTTATGACCATCGAACTCCC
TGATCTGACCGACTATCTTTACCGTCTAATCCGCGACAAACTGCGCCTGG
CCAACGCTCCCAACCACATTGAACCCTCCCTGCGCTACCAATTCCTGCAA
GAATTTAATGTGACCATCCAAGAGCGCATCACTGGCTCTCGTCACGCCTG
TGAAACAGACTGGGACGGCCGAAACCGCCGTAATTGTCAGGATCCGGTGT
GTCGGGCTGAGTATCGTCGGCTGCTAGGATCCGTTGGTGGAAGAGGATAC
AGTCGGATGATTGAGACGCTCGAGTCAACTTATTGGATTCTGAGGGCAGC
CAGGACGACCCACCCTAGTGTGAAGGATGCGATGAAACGTATGATGGGGG
AGGGGTATGCGGAGGTGGCGGAGGAAGATAGACGGGCCTTTAGAAGGGGG
GATGGGTGGGATGGGGCGGGTTCGGGTGATATGGAGATAGAGGGGTTTAA
TGAGGGGGATGAGTAGATGGAACCTCCTGGGGATTCAAAGGCCAAAAGGA
ATAAGAAGAAGAAGAATAAGTACAAGAAGAAGAAACTCCTGCTAGGTGAT
TCCGAAAGCGAGACTTCTGGGAGCCAGGGCTCTGGATTGAACGAGGACTT
GTCTCACTTTGCTTGGATGCCAGCCAAAGGCCTGAACTCTGGCGGCTGTG
CAAATCAAGAAAAGCCCATGTCAGGCAGCAATGTGTCTCAGAGATGTACA
GTGGACAGTGACAAGAAGCGAGATTTGATAGAGTCACTAAGCAAGTTGGA
CATCAAAGGCAAGCAGCGGGTCTGGCAAGTGAACGCAGTCACAGGCAACG
ATACATTGGAGGACATAAATACACAGCGTGGTCCCCAACCGGTGGACAAG
GCGAGAAGAACTGTGCTCGCTCCTTCATATGCCACGGTTCTTTCTGGAAA
ACGTGCCAGTATCGAGGGTCCATCTTCTATGCCAAACAACAGTGATTCCC
TCCTACCGACGACCATGGAATTCCCCAAACTCACAGACAAGACCTCCGCC
GGACAGGATAGTAATTCTGAAGCACGCTCCGGCCATGCAAAGCTCTCTCC
TATTCCGGAAATATCAGGTGAATTTGCAGGTGATAACTCCAACGACATAC
CGCTCAGTCAAACGGACCTAGAAACCGCAGGTTCCAGTTCACTTGACAAC
CCAATCTCGACCCCTGTGTCCACAGTATCCACTGGCTGGAGCAGCACAGC
ACTGCAAATCAGCCCACAAACGACTGAGCCGTCTTCTGAACCATCCTCGT
CCAAGGCAGTCAGCCATCGCCACGCCACTAGTCTTCACCACGCCCATCCC
CTACCACCCACACCCCCAAGTAGCACCCATTCCCACTCCCTGTCGACAGC
CAACGCTACCATAACTAACGCCCAGGGCACCCTCTCCGCCCAGAAACCAG
AGGGGTTCTTTTGGCAACTTGACAGCCACGGCTTCCCCTGTGCCAAAGCC
CACTGCGAGAAACGCTGCAACCTCTGGGACGGAGCAACAGTGATCTGTCC
ACGATGCGGGCCCTACTCCGAAGTACGGTATTGCAGTAGAGCCCACCTAC
TTGAGGACATCAAACCTCACTGGCTCTACTGCGGACAGATGGTATTTCAA
CACCCATGTCGTGAAACCTCAATCCCAAGACGAGTCCGCGCTGGACCTCC
TCTCATCCCGTGCCTGCATCACTACGACATGCCGGAGCGTCATCGCCAAG
CCGTGCACTTCAATATGAATGCCAGAGAAGGCGATTACTTCATCTTCACG
GACTGGCTGGATTTTGTTACCGCCGGACTACCAGGTGATAAAACGGCTAT
ACGATGTTCGAATAGAATAATGTACGTGGTTAAATTTGATGATGCGGCAG
AGAAAGATCGATTCCGTCGTGTTCTGGCGGCTTGCCTCTTTATGACCATC
GAACTCCCTGATCTGACCGACTATCTTTACCGTCTAATCCGCGACAAACT
GCGCCTGGCCAACGCTCCCAACCACATTGAACCCTCCCTGCGCTACCAAT
TCCTGCAAGAATTTAATGTGACCATCCAAGAGCGCATCACTGGCTCTCGT
CACGCCTGTGAAACAGACTGGGACGGCCGAAACCGCCGTAATTGTCAGGA
TCCGGTGTGTCGGGCTGAGTATCGTCGGCTGCTAGGATCCGTTGGTGGAA
GAGGATACAGTCGGATGATTGAGACGCTCGAGTCAACTTATTGGATTCTG
AGGGCAGCCAGGACGACCCACCCTAGTGTGAAGGATGCGATGAAACGTAT
GATGGGGGAGGGGTATGCGGAGGTGGCGGAGGAAGATAGACGGGCCTTTA
GAAGGGGGGATGGGTGGGATGGGGCGGGTTCGGGTGATATGGAGATAGAG
GGGTTTAATGAGGGGGATGAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008801-T1.utr5p1 | KJC3_008801-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_6.16 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3088229..3090461 + |
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