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KJC3_008803-T1, KJC3_008803-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008803-T1
Unique NameKJC3_008803-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3093439..3095665+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008803-T1 ID=KJC3_008803-T1|Name=KJC3_008803-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2227bp|location=Sequence derived from alignment at ch6:3093439..3095665+ (Aspergillus niger KJC3)
GCTCGATTTCCATGGCCGCCACTGGGAGCTGCTCTGCACCCAGCTTGCTG
GCAGCGCTTCTTCTACGATTCTAATGACTAACCGCCATCATGGTGTCTTG
TCCCATCTGCAGCCAGTCCGTCTCGTCCCTAAAGATTAACGACCACATCG
ATTCCGACTGCCAGAACTTTATCGAAGAGCCGCCCAGCTCGGGGGAGACT
CCCGCCACTCAGAAAGCTCCGGTTCCCAGCTTCTTCCAGCCAGCCTCTGC
TAAGAAAGCTTCTGCCCAGTCTGCTCAGGCAAATGGACAGCGAGATCAAA
ATGTGACTTCCTCCCCACTGCGCAATGTCAACGGCAAACGGGCGACGCCG
CACGATGCCAACTCATCGGAGGTATACGAGAGATCCGGGCCCAGCCAACC
GTCGAGCGAACCAAAGAAGCCAAAAGTTAGCGCCTTGCAAAAGGCTGCGC
CTTTACCGGAACGCATGCGTCCTCGGACTCTTGACGATGTCTGCGGACAA
GAGCTTGTAGGGCCAAACGGAGTGCTTCGGGGCTTGATTGAGCAAGATCG
GGTTCCGAGTATGATTCTTTGGGGTGGTCCAGGAACAGGAAAAACAACCA
TTGCTCGCGTGATTGCTTCGATGGTTGGTAGCCGCTTCGTTGAGATCAAC
AGTACCAGTTCGGGAGTTGCGGAGTGCAAGAAAATCTTCTCCGATGCGAA
AAGTGAGCTCGGTCTGACGGGACGGAAGACCATCATTTTCTGTGACGAGA
TTCATCGATTCTCCAAGTCTCAACAAGACGTATTTCTGGGACCAGTAGAA
AGTGGGCAGGTAACGCTTATTGGTGCTACCACGGAGAACCCTTCTTTCAA
GGTGCAGAACGCTCTGCTGTCCCGGTGTCGGACTTTTACTCTTTCCAAAC
TTACAGACGAAGATATCAAATCGATCCTTCATCGAGCACTACGGCTGGAG
GGGCCGAACTATTCGCCTTCGGAATTGGTCGATGAAGAATTGATTGATTA
CTTGGCCAGGTTCGCCGATGGCGACGCGCGGACGTCCCTTAATCTTCTAG
AGCTCGCCATGGATCTGTCGAAACGGCCTGGAATGACCAAGGATGAGATC
AAGCGGTCATTGACTAAGACCCTTGTCTATGATCGGGCCGGGGATCAACA
CTACGATACCATTTCCGCTTTTCACAAATCCATCCGGGGGAGCGATCCGG
ATGCGGCGCTTTACTATCTTGCTCGCATGATCCAGTCGGGAGAAGACCCC
CTCTATATCGCTCGACGTCTCATCGTCGTCGCTTCGGAGGACATTGGGCT
TGCGGACAACAGCATGCTCACGCTAGCCATCTCGACCCACGCGGCTGTGG
AAAAGATCGGCCTACCGGAGGCACGGATCAATCTGGCACATGCGACCGTT
GCCATGGCACTCTCAAAGAAGAGCACGCGGTCGTACCGCGGCCTGAACAA
TGCATTTGCTGCGCTAGCAGAGCCCGGCGTTGCTGGGCTGCCTGTTCCGA
TCCATCTGCGCAATGCGCCGACTCGGTTGATGAAGGAGCTCGGATACGGC
AAGGAATACAAGTATAATCCTAACTATGTCGACGGGGAGGTCGTCCAGGA
CTATCTCCCGGAAAAGATTTTGGGACGGAAGTTCTTGGAGGATCACGATC
TAGGACATCAGGTGGACCCAGATCTCATGAGGTAGACTACTCATGTTCAT
GTCAATGAGGCAGTATAAACCTGCCAATGCCATTGGCTCGCCCTCGATCA
TCACACAAGGCCACGCAGAGCCAGCGTGTGCCTGATGGCACAAATATGCT
TGCATGAAAGCACCTCGATCGCCTCCACCATTGGCAGCATGCCAATGTCA
GATATGGGGCGTAAAAGACATCTGCTGGATCAGACGGAGCCCATCAAACT
TGTACAGGCGCTTACCAGAAAAAGCTTTTCCCCTGTCCAGGCACAGGAAA
CTGCGCATTGGGCGGTTGGGTAGGAGTATGACGGAGTAACCACGGCCAGT
TGCCAGGAGTACATGCCAGGGACAGCCTCACGCATACTTTCTACCGAAAG
ATATAGACCATGGTAGATACAATTGAGTACATAGGACAGATAACTGCTTC
CTACATTTTAGACTTCTAGTCTACCAACTAATCGGTACCAAGTTAGTAGG
ATGTTCAAACCAAACGTGTTCCAGGTTAGACTCCGCCGCCAATCAAACAG
CCGCCTCGCGTCTCCATCGCGTCTCCA
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Coding sequence (CDS) from alignment at ch6:3093439..3095665+

>KJC3_008803-T1 ID=KJC3_008803-T1|Name=KJC3_008803-T1|organism=Aspergillus niger KJC3|type=CDS|length=1596bp|location=Sequence derived from alignment at ch6:3093439..3095665+ (Aspergillus niger KJC3)
ATGGTGTCTTGTCCCATCTGCAGCCAGTCCGTCTCGTCCCTAAAGATTAA
CGACCACATCGATTCCGACTGCCAGAACTTTATCGAAGAGCCGCCCAGCT
CGGGGGAGACTCCCGCCACTCAGAAAGCTCCGGTTCCCAGCTTCTTCCAG
CCAGCCTCTGCTAAGAAAGCTTCTGCCCAGTCTGCTCAGGCAAATGGACA
GCGAGATCAAAATGTGACTTCCTCCCCACTGCGCAATGTCAACGGCAAAC
GGGCGACGCCGCACGATGCCAACTCATCGGAGGTATACGAGAGATCCGGG
CCCAGCCAACCGTCGAGCGAACCAAAGAAGCCAAAAGTTAGCGCCTTGCA
AAAGGCTGCGCCTTTACCGGAACGCATGCGTCCTCGGACTCTTGACGATG
TCTGCGGACAAGAGCTTGTAGGGCCAAACGGAGTGCTTCGGGGCTTGATT
GAGCAAGATCGGGTTCCGAGTATGATTCTTTGGGGTGGTCCAGGAACAGG
AAAAACAACCATTGCTCGCGTGATTGCTTCGATGGTTGGTAGCCGCTTCG
TTGAGATCAACAGTACCAGTTCGGGAGTTGCGGAGTGCAAGAAAATCTTC
TCCGATGCGAAAAGTGAGCTCGGTCTGACGGGACGGAAGACCATCATTTT
CTGTGACGAGATTCATCGATTCTCCAAGTCTCAACAAGACGTATTTCTGG
GACCAGTAGAAAGTGGGCAGGTAACGCTTATTGGTGCTACCACGGAGAAC
CCTTCTTTCAAGGTGCAGAACGCTCTGCTGTCCCGGTGTCGGACTTTTAC
TCTTTCCAAACTTACAGACGAAGATATCAAATCGATCCTTCATCGAGCAC
TACGGCTGGAGGGGCCGAACTATTCGCCTTCGGAATTGGTCGATGAAGAA
TTGATTGATTACTTGGCCAGGTTCGCCGATGGCGACGCGCGGACGTCCCT
TAATCTTCTAGAGCTCGCCATGGATCTGTCGAAACGGCCTGGAATGACCA
AGGATGAGATCAAGCGGTCATTGACTAAGACCCTTGTCTATGATCGGGCC
GGGGATCAACACTACGATACCATTTCCGCTTTTCACAAATCCATCCGGGG
GAGCGATCCGGATGCGGCGCTTTACTATCTTGCTCGCATGATCCAGTCGG
GAGAAGACCCCCTCTATATCGCTCGACGTCTCATCGTCGTCGCTTCGGAG
GACATTGGGCTTGCGGACAACAGCATGCTCACGCTAGCCATCTCGACCCA
CGCGGCTGTGGAAAAGATCGGCCTACCGGAGGCACGGATCAATCTGGCAC
ATGCGACCGTTGCCATGGCACTCTCAAAGAAGAGCACGCGGTCGTACCGC
GGCCTGAACAATGCATTTGCTGCGCTAGCAGAGCCCGGCGTTGCTGGGCT
GCCTGTTCCGATCCATCTGCGCAATGCGCCGACTCGGTTGATGAAGGAGC
TCGGATACGGCAAGGAATACAAGTATAATCCTAACTATGTCGACGGGGAG
GTCGTCCAGGACTATCTCCCGGAAAAGATTTTGGGACGGAAGTTCTTGGA
GGATCACGATCTAGGACATCAGGTGGACCCAGATCTCATGAGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006281DNA repair
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008803KJC3_008803Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008803-T1.utr5p1KJC3_008803-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008803-T1.exon1KJC3_008803-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008803-T1.cdsKJC3_008803-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008803-T1.utr3p1KJC3_008803-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008803-T1KJC3_008803-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261W2O
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR021886
DBxrefInterPro:IPR032423
DBxrefInterPro:IPR003593
DBxrefInterPro:IPR006642
DBxrefPFAM:PF05496
DBxrefPFAM:PF12002
DBxrefPFAM:PF16193
DBxrefPFAM:PF07726
DBxrefPFAM:PF00004
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3093439..3095665 +
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