You are here

Home

KJC3_008814-T1, KJC3_008814-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008814-T1
Unique NameKJC3_008814-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3134451..3136573-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008814-T1 ID=KJC3_008814-T1|Name=KJC3_008814-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2123bp|location=Sequence derived from alignment at ch6:3134451..3136573- (Aspergillus niger KJC3)
CCCAAACCACGCCTGCCACGGCTTGTCGTTCATCCTCGAATCTCCCACCT
TTCCTCCCCCCTCCTTTCCCCCTCCCAAGTCAATTGGGCCAGTGTTCACC
ATGATATCTCGAGCGGCGGCTCCCTCGTCTTCCATCGCCTCCCTCTCCTC
CCGCTCCCTCCGAGCCCAGGCCCCGGCCGCCCGTTCCTTCGCGACCGTCC
AGGACAACGCCCCCCCGGTCAAGCACTATGGCGGTCTGAAGGACCAGGAT
CGGATCTTCACCAACCTCTACGGACACCATGGAGCTGATCTGAAGTCGGC
GATGAAGTATGGTGACTGGCACCGGACTAAGGATATCGTTCTGAAGGGCC
ATGACTGGGTAGGCTCTGCCCCTTCGCTGGTCCATTGGACCCGGAATTGC
TGGAAGATGCGGAAATGATTTTAATGCTGACTTGAAATGTGTTCGATATG
TGCAGCTTATCTCTGAGCTGAAGGCCTCCGGTCTTCGTGGTCGTGGTGGT
GCTGGTTTCCCCTCCGGATTGAAATACGTGAGTTATCCTGACCGAGACCA
ATTGATGACATAGCCAGTCTTCGGGCCCCAGTCTAACTTTCTCAATCGAT
GTGGTAAAGTCCTTCATGAACTTCAAGGACTGGGACAAGGACCCCAGACC
CCGTTACCTCGTCGTCAATGCCGATGAGGGTGAGCCCGGAACCTGCAAGG
ATCGTGAAATCATGCGCAAAGACCCCCAGAAGCTCATCGAAGGTTGCCTC
GTCGTCGGCCGTGCCATGAACGCCAACGCCGCTTACATCTACATCCGTGG
TGAATTTTACCAAGAAGCTACCGTTCTCCAGCGGGCTATCAACGAGGCCT
ACGAGGCTGGCCTGATCGGCAAGAACGCCTGCGGTACCGGCTACGACTTC
GACGTCTACATCCACCGTGGTATGGGCGCCTACGTCTGTGGTGAGGAGAC
CTCCCTCATCGAGTCCATCGAGGGTAAGGCCGGCAAGCCCCGTCTTAAGC
CCCCGTTCCCCGCTGCTGTCGGTCTCTTCGGCTGCCCCAGTACCGTCACC
AACGTCGAGACTGTCGCCGTCACCCCCACCATCATGCGTCGTGGCGCCAG
CTGGTTCTCGTCTTTCGGCCGTGAGCGCAACGCTGGTACCAAGCTTTTCT
GTATCTCCGGACACGTCAACAACCCCTGCACTGTCGAGGAGGAGATGTCT
ATCTCCCTGCGCGAGCTGATCGACCGCCACTGTGGAGGTGTCCGTGGCGG
CTGGGACAACCTCCTCGCTGTCATTCCCGGTGGATCCTCGACTCCCGTCC
TTCCCAAGACCATTTGTGACGACCAGCTCATGGACTTCGACGCCCTGAAG
GACTCTCAGAGTGGTCTCGGTACCGCTGCCGTTATCGTCATGGACAAGTC
GACCGACATTGTTCGCGCCATCTCTCGTCTGTCCACCTTCTACAAGCACG
AGTCTTGCGGTCAGTGCACTCCCTGCCGTGAGGGCAGCAAGTGGACCATG
CAGATGATGCAGCGTATGGAGAAGGGTCAGGCCCGCGAGCGTGAGATCGA
CATGCTCCAGGAGCTGACCAAGCAGGTCGAGGGTCACACCATCTGCGCTC
TGGGTGAGGCCTTTGCCTGGCCCATCCAGGGTCTGATCCGTCACTTCCGC
CCCGAGCTGGAGGCCCGCATCCGGGAGTACTCGAAGGAGGTTGGTGGAAA
CGGACCTTACGCTGGTGGTTGGCACCCGGAGGCCCGCGCTGAGGGCAAGC
TGATCTCTCCTGGCATGTAATTACCATAAATCTGTCTCAAATCTCTTTCT
CTCTCTCTGTGTGTGTACGACTTCCACTATGGGGATAGAATAGCTTCGCT
CGCGACACCCTGCAGTTCGTCAGGAATAGAGCAACAGGGCAAGCGAGGGA
GGGAAAAAGAAACAAAAAGAGGAAAAAGAGAAAAGAGAAGAAGTTAATCT
TTGCCAAATTTTTCTTTTCTTTTTCTTTCGATTTCCTAGAGGGAGTGTGT
GTTCTTTTCCTTTTTACCCCTTGTCTCCCACCCATCTCATATTTTCCTTT
TATATCTTACGTGTCGTGTTAGGTTCTCGATCATGTACAGTCCTGGTAGC
AATTGAACTTTTTCTTTGGTTTA
back to top

Coding sequence (CDS) from alignment at ch6:3134451..3136573-

>KJC3_008814-T1 ID=KJC3_008814-T1|Name=KJC3_008814-T1|organism=Aspergillus niger KJC3|type=CDS|length=4473bp|location=Sequence derived from alignment at ch6:3134451..3136573- (Aspergillus niger KJC3)
TCCTTCATGAACTTCAAGGACTGGGACAAGGACCCCAGACCCCGTTACCT
CGTCGTCAATGCCGATGAGGGTGAGCCCGGAACCTGCAAGGATCGTGAAA
TCATGCGCAAAGACCCCCAGAAGCTCATCGAAGGTTGCCTCGTCGTCGGC
CGTGCCATGAACGCCAACGCCGCTTACATCTACATCCGTGGTGAATTTTA
CCAAGAAGCTACCGTTCTCCAGCGGGCTATCAACGAGGCCTACGAGGCTG
GCCTGATCGGCAAGAACGCCTGCGGTACCGGCTACGACTTCGACGTCTAC
ATCCACCGTGGTATGGGCGCCTACGTCTGTGGTGAGGAGACCTCCCTCAT
CGAGTCCATCGAGGGTAAGGCCGGCAAGCCCCGTCTTAAGCCCCCGTTCC
CCGCTGCTGTCGGTCTCTTCGGCTGCCCCAGTACCGTCACCAACGTCGAG
ACTGTCGCCGTCACCCCCACCATCATGCGTCGTGGCGCCAGCTGGTTCTC
GTCTTTCGGCCGTGAGCGCAACGCTGGTACCAAGCTTTTCTGTATCTCCG
GACACGTCAACAACCCCTGCACTGTCGAGGAGGAGATGTCTATCTCCCTG
CGCGAGCTGATCGACCGCCACTGTGGAGGTGTCCGTGGCGGCTGGGACAA
CCTCCTCGCTGTCATTCCCGGTGGATCCTCGACTCCCGTCCTTCCCAAGA
CCATTTGTGACGACCAGCTCATGGACTTCGACGCCCTGAAGGACTCTCAG
AGTGGTCTCGGTACCGCTGCCGTTATCGTCATGGACAAGTCGACCGACAT
TGTTCGCGCCATCTCTCGTCTGTCCACCTTCTACAAGCACGAGTCTTGCG
GTCAGTGCACTCCCTGCCGTGAGGGCAGCAAGTGGACCATGCAGATGATG
CAGCGTATGGAGAAGGGTCAGGCCCGCGAGCGTGAGATCGACATGCTCCA
GGAGCTGACCAAGCAGGTCGAGGGTCACACCATCTGCGCTCTGGGTGAGG
CCTTTGCCTGGCCCATCCAGGGTCTGATCCGTCACTTCCGCCCCGAGCTG
GAGGCCCGCATCCGGGAGTACTCGAAGGAGGTTGGTGGAAACGGACCTTA
CGCTGGTGGTTGGCACCCGGAGGCCCGCGCTGAGGGCAAGCTGATCTCTC
CTGGCATGTAACTTATCTCTGAGCTGAAGGCCTCCGGTCTTCGTGGTCGT
GGTGGTGCTGGTTTCCCCTCCGGATTGAAATACATGATATCTCGAGCGGC
GGCTCCCTCGTCTTCCATCGCCTCCCTCTCCTCCCGCTCCCTCCGAGCCC
AGGCCCCGGCCGCCCGTTCCTTCGCGACCGTCCAGGACAACGCCCCCCCG
GTCAAGCACTATGGCGGTCTGAAGGACCAGGATCGGATCTTCACCAACCT
CTACGGACACCATGGAGCTGATCTGAAGTCGGCGATGAAGTATGGTGACT
GGCACCGGACTAAGGATATCGTTCTGAAGGGCCATGACTGGTCCTTCATG
AACTTCAAGGACTGGGACAAGGACCCCAGACCCCGTTACCTCGTCGTCAA
TGCCGATGAGGGTGAGCCCGGAACCTGCAAGGATCGTGAAATCATGCGCA
AAGACCCCCAGAAGCTCATCGAAGGTTGCCTCGTCGTCGGCCGTGCCATG
AACGCCAACGCCGCTTACATCTACATCCGTGGTGAATTTTACCAAGAAGC
TACCGTTCTCCAGCGGGCTATCAACGAGGCCTACGAGGCTGGCCTGATCG
GCAAGAACGCCTGCGGTACCGGCTACGACTTCGACGTCTACATCCACCGT
GGTATGGGCGCCTACGTCTGTGGTGAGGAGACCTCCCTCATCGAGTCCAT
CGAGGGTAAGGCCGGCAAGCCCCGTCTTAAGCCCCCGTTCCCCGCTGCTG
TCGGTCTCTTCGGCTGCCCCAGTACCGTCACCAACGTCGAGACTGTCGCC
GTCACCCCCACCATCATGCGTCGTGGCGCCAGCTGGTTCTCGTCTTTCGG
CCGTGAGCGCAACGCTGGTACCAAGCTTTTCTGTATCTCCGGACACGTCA
ACAACCCCTGCACTGTCGAGGAGGAGATGTCTATCTCCCTGCGCGAGCTG
ATCGACCGCCACTGTGGAGGTGTCCGTGGCGGCTGGGACAACCTCCTCGC
TGTCATTCCCGGTGGATCCTCGACTCCCGTCCTTCCCAAGACCATTTGTG
ACGACCAGCTCATGGACTTCGACGCCCTGAAGGACTCTCAGAGTGGTCTC
GGTACCGCTGCCGTTATCGTCATGGACAAGTCGACCGACATTGTTCGCGC
CATCTCTCGTCTGTCCACCTTCTACAAGCACGAGTCTTGCGGTCAGTGCA
CTCCCTGCCGTGAGGGCAGCAAGTGGACCATGCAGATGATGCAGCGTATG
GAGAAGGGTCAGGCCCGCGAGCGTGAGATCGACATGCTCCAGGAGCTGAC
CAAGCAGGTCGAGGGTCACACCATCTGCGCTCTGGGTGAGGCCTTTGCCT
GGCCCATCCAGGGTCTGATCCGTCACTTCCGCCCCGAGCTGGAGGCCCGC
ATCCGGGAGTACTCGAAGGAGGTTGGTGGAAACGGACCTTACGCTGGTGG
TTGGCACCCGGAGGCCCGCGCTGAGGGCAAGCTGATCTCTCCTGGCATGT
AACTTATCTCTGAGCTGAAGGCCTCCGGTCTTCGTGGTCGTGGTGGTGCT
GGTTTCCCCTCCGGATTGAAATACATGATATCTCGAGCGGCGGCTCCCTC
GTCTTCCATCGCCTCCCTCTCCTCCCGCTCCCTCCGAGCCCAGGCCCCGG
CCGCCCGTTCCTTCGCGACCGTCCAGGACAACGCCCCCCCGGTCAAGCAC
TATGGCGGTCTGAAGGACCAGGATCGGATCTTCACCAACCTCTACGGACA
CCATGGAGCTGATCTGAAGTCGGCGATGAAGTATGGTGACTGGCACCGGA
CTAAGGATATCGTTCTGAAGGGCCATGACTGGTCCTTCATGAACTTCAAG
GACTGGGACAAGGACCCCAGACCCCGTTACCTCGTCGTCAATGCCGATGA
GGGTGAGCCCGGAACCTGCAAGGATCGTGAAATCATGCGCAAAGACCCCC
AGAAGCTCATCGAAGGTTGCCTCGTCGTCGGCCGTGCCATGAACGCCAAC
GCCGCTTACATCTACATCCGTGGTGAATTTTACCAAGAAGCTACCGTTCT
CCAGCGGGCTATCAACGAGGCCTACGAGGCTGGCCTGATCGGCAAGAACG
CCTGCGGTACCGGCTACGACTTCGACGTCTACATCCACCGTGGTATGGGC
GCCTACGTCTGTGGTGAGGAGACCTCCCTCATCGAGTCCATCGAGGGTAA
GGCCGGCAAGCCCCGTCTTAAGCCCCCGTTCCCCGCTGCTGTCGGTCTCT
TCGGCTGCCCCAGTACCGTCACCAACGTCGAGACTGTCGCCGTCACCCCC
ACCATCATGCGTCGTGGCGCCAGCTGGTTCTCGTCTTTCGGCCGTGAGCG
CAACGCTGGTACCAAGCTTTTCTGTATCTCCGGACACGTCAACAACCCCT
GCACTGTCGAGGAGGAGATGTCTATCTCCCTGCGCGAGCTGATCGACCGC
CACTGTGGAGGTGTCCGTGGCGGCTGGGACAACCTCCTCGCTGTCATTCC
CGGTGGATCCTCGACTCCCGTCCTTCCCAAGACCATTTGTGACGACCAGC
TCATGGACTTCGACGCCCTGAAGGACTCTCAGAGTGGTCTCGGTACCGCT
GCCGTTATCGTCATGGACAAGTCGACCGACATTGTTCGCGCCATCTCTCG
TCTGTCCACCTTCTACAAGCACGAGTCTTGCGGTCAGTGCACTCCCTGCC
GTGAGGGCAGCAAGTGGACCATGCAGATGATGCAGCGTATGGAGAAGGGT
CAGGCCCGCGAGCGTGAGATCGACATGCTCCAGGAGCTGACCAAGCAGGT
CGAGGGTCACACCATCTGCGCTCTGGGTGAGGCCTTTGCCTGGCCCATCC
AGGGTCTGATCCGTCACTTCCGCCCCGAGCTGGAGGCCCGCATCCGGGAG
TACTCGAAGGAGGTTGGTGGAAACGGACCTTACGCTGGTGGTTGGCACCC
GGAGGCCCGCGCTGAGGGCAAGCTGATCTCTCCTGGCATGTAACTTATCT
CTGAGCTGAAGGCCTCCGGTCTTCGTGGTCGTGGTGGTGCTGGTTTCCCC
TCCGGATTGAAATACATGATATCTCGAGCGGCGGCTCCCTCGTCTTCCAT
CGCCTCCCTCTCCTCCCGCTCCCTCCGAGCCCAGGCCCCGGCCGCCCGTT
CCTTCGCGACCGTCCAGGACAACGCCCCCCCGGTCAAGCACTATGGCGGT
CTGAAGGACCAGGATCGGATCTTCACCAACCTCTACGGACACCATGGAGC
TGATCTGAAGTCGGCGATGAAGTATGGTGACTGGCACCGGACTAAGGATA
TCGTTCTGAAGGGCCATGACTGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0008137NADH dehydrogenase (ubiquinone) activity
GO:0016651oxidoreductase activity, acting on NAD(P)H
GO:0051287NAD binding
GO:0010181FMN binding
GO:00515394 iron, 4 sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NUO51KJC3_008814Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008814-T1KJC3_008814-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008814-T1.cdsKJC3_008814-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008814-T1.utr3p1KJC3_008814-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008814-T1.exon3KJC3_008814-T1.exon3Aspergillus niger KJC3exon
KJC3_008814-T1.exon2KJC3_008814-T1.exon2Aspergillus niger KJC3exon
KJC3_008814-T1.exon1KJC3_008814-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008814-T1.utr5p1KJC3_008814-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001949
DBxrefInterPro:IPR037225
DBxrefInterPro:IPR037207
DBxrefInterPro:IPR019554
DBxrefInterPro:IPR011538
DBxrefInterPro:IPR011537
DBxrefInterPro:IPR019575
DBxrefPFAM:PF10531
DBxrefPFAM:PF10589
DBxrefPFAM:PF01512
Product mitochondrial precursor
ProductNADH-ubiquinone oxidoreductase 51 kDa subunit
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3134451..3136573 -
Powered by Drupal