|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3220986..3222231+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008839-T1 ID=KJC3_008839-T1|Name=KJC3_008839-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1246bp|location=Sequence derived from alignment at ch6:3220986..3222231+ (Aspergillus niger KJC3)
TCTGCGCCATCAATACTATCTTTCCTCGTATACAAACCCTGGCACTGTGC
TCTTACCTCAGCTCACGTGGCATAATCCTCACATAACATCCCCTGTGCCT
GCCGGGTCATTACGAGCCTGTGTGTCTTAAGCCCAATCCCAATGGCGTCC
CTCACTTTAGTTGTTCAGCCCCGGGGTAAGTTTCCTGGCCACCATCATCT
CCCTTCCAGTCAATGTCAATCAATATCTCCGAACCGAACTGACATTGGCT
TCCCATCATTTAGGTAAACCCATTAAGAAGCTCCCCAAGGAGGTTCAGGT
GTCCTCCAATGCCTCGACCGCCGAAATCTACAACAAGCTCGCGGAAGCCT
CGGGCTTCTCCATCCACCGTCTCAGGATCACCAAGGGTAGCGATCGCACT
GTAGTCCCCAACTCTAAGGACTCGACCGTCGACGGAATCGGTCTGAAGGA
AAAGAGCGTCTTGCACATCAAAGATCTCGGTTAGTAGATAAGCTGACACG
ACCCCATCCCAAACTACACCACCACTATATCCCGACTCATTCACTAACCG
TCTCCATAATCTTCAGGCCCCCAACTTGGATGGCGCACCGTCTACATTAT
CGAATACCTCGGACCGCTCTTCATCCCGGCTCTCTTCCTCTTCCCCCTCC
GCCCATATGTCTACTTTAACTTCGACAAGCCACTTCCTGACCCATCGCAG
TTCCAGCTCCTGGTCTGCGCCCTCCTGACCATCCACTTCATCAAGCGCGA
ATACGAAACCGTCTTCGTCCACCGTTTCAGCAATGCCACCATGCCCGCAC
GCAACATCGTCAAGAACAGCGGCCACTACTGGGTCCTAGCCGGTTTGAAC
ATCGCCTACTGGGTCTTCCGTCCCGACTCCCCCGCCGCCACCATCCAAGA
CTCTTTCCTCCTCTACAGCGGTCTGGCATTGTTCATTTTCGGCGAGCTTG
CGAACCTAAACGCTCACCTTGTGCTACGCGACCTGCGCCGTCCCGGTACC
ACGGAAAGAGGCATTCCCTCCGGATTTGGATTCAACGTCGTTACCTGCCC
CAACTACTTCTTCGAGGTTGTCAGCTGGGTGGGCATCTACCTGCTGAGCG
GAATGAGCTGGAGCGTTCTCTTCTTCATTGTCGTTGGTACCGTGCAGATG
GCTCTCTGGGCTAAGAAGAAGGAACGCCGCTACCGCAAAGAGTTCGGTGA
CAAGTACAAGCGCAAGCGCTATGTTATCCTGCCCGGTCTGTACTAG back to topCoding sequence (CDS) from alignment at ch6:3220986..3222231+ >KJC3_008839-T1 ID=KJC3_008839-T1|Name=KJC3_008839-T1|organism=Aspergillus niger KJC3|type=CDS|length=2790bp|location=Sequence derived from alignment at ch6:3220986..3222231+ (Aspergillus niger KJC3)
ATGGCGTCCCTCACTTTAGTTGTTCAGCCCCGGGGTAAACCCATTAAGAA
GCTCCCCAAGGAGGTTCAGGTGTCCTCCAATGCCTCGACCGCCGAAATCT
ACAACAAGCTCGCGGAAGCCTCGGGCTTCTCCATCCACCGTCTCAGGATC
ACCAAGGGTAGCGATCGCACTGTAGTCCCCAACTCTAAGGACTCGACCGT
CGACGGAATCGGTCTGAAGGAAAAGAGCGTCTTGCACATCAAAGATCTCG
GCCCCCAACTTGGATGGCGCACCGTCTACATTATCGAATACCTCGGACCG
CTCTTCATCCCGGCTCTCTTCCTCTTCCCCCTCCGCCCATATGTCTACTT
TAACTTCGACAAGCCACTTCCTGACCCATCGCAGTTCCAGCTCCTGGTCT
GCGCCCTCCTGACCATCCACTTCATCAAGCGCGAATACGAAACCGTCTTC
GTCCACCGTTTCAGCAATGCCACCATGCCCGCACGCAACATCGTCAAGAA
CAGCGGCCACTACTGGGTCCTAGCCGGTTTGAACATCGCCTACTGGGTCT
TCCGTCCCGACTCCCCCGCCGCCACCATCCAAGACTCTTTCCTCCTCTAC
AGCGGTCTGGCATTGTTCATTTTCGGCGAGCTTGCGAACCTAAACGCTCA
CCTTGTGCTACGCGACCTGCGCCGTCCCGGTACCACGGAAAGAGGCATTC
CCTCCGGATTTGGATTCAACGTCGTTACCTGCCCCAACTACTTCTTCGAG
GTTGTCAGCTGGGTGGGCATCTACCTGCTGAGCGGAATGAGCTGGAGCGT
TCTCTTCTTCATTGTCGTTGGTACCGTGCAGATGGCTCTCTGGGCTAAGA
AGAAGGAACGCCGCTACCGCAAAGAGTTCGGTGACAAGTACAAGCGCAAG
CGCTATGTTATCCTGCCCGGTCTGTACTAGATGGCGTCCCTCACTTTAGT
TGTTCAGCCCCGGGGTAAACCCATTAAGAAGCTCCCCAAGGAGGTTCAGG
TGTCCTCCAATGCCTCGACCGCCGAAATCTACAACAAGCTCGCGGAAGCC
TCGGGCTTCTCCATCCACCGTCTCAGGATCACCAAGGGTAGCGATCGCAC
TGTAGTCCCCAACTCTAAGGACTCGACCGTCGACGGAATCGGTCTGAAGG
AAAAGAGCGTCTTGCACATCAAAGATCTCGGCCCCCAACTTGGATGGCGC
ACCGTCTACATTATCGAATACCTCGGACCGCTCTTCATCCCGGCTCTCTT
CCTCTTCCCCCTCCGCCCATATGTCTACTTTAACTTCGACAAGCCACTTC
CTGACCCATCGCAGTTCCAGCTCCTGGTCTGCGCCCTCCTGACCATCCAC
TTCATCAAGCGCGAATACGAAACCGTCTTCGTCCACCGTTTCAGCAATGC
CACCATGCCCGCACGCAACATCGTCAAGAACAGCGGCCACTACTGGGTCC
TAGCCGGTTTGAACATCGCCTACTGGGTCTTCCGTCCCGACTCCCCCGCC
GCCACCATCCAAGACTCTTTCCTCCTCTACAGCGGTCTGGCATTGTTCAT
TTTCGGCGAGCTTGCGAACCTAAACGCTCACCTTGTGCTACGCGACCTGC
GCCGTCCCGGTACCACGGAAAGAGGCATTCCCTCCGGATTTGGATTCAAC
GTCGTTACCTGCCCCAACTACTTCTTCGAGGTTGTCAGCTGGGTGGGCAT
CTACCTGCTGAGCGGAATGAGCTGGAGCGTTCTCTTCTTCATTGTCGTTG
GTACCGTGCAGATGGCTCTCTGGGCTAAGAAGAAGGAACGCCGCTACCGC
AAAGAGTTCGGTGACAAGTACAAGCGCAAGCGCTATGTTATCCTGCCCGG
TCTGTACTAGATGGCGTCCCTCACTTTAGTTGTTCAGCCCCGGGGTAAAC
CCATTAAGAAGCTCCCCAAGGAGGTTCAGGTGTCCTCCAATGCCTCGACC
GCCGAAATCTACAACAAGCTCGCGGAAGCCTCGGGCTTCTCCATCCACCG
TCTCAGGATCACCAAGGGTAGCGATCGCACTGTAGTCCCCAACTCTAAGG
ACTCGACCGTCGACGGAATCGGTCTGAAGGAAAAGAGCGTCTTGCACATC
AAAGATCTCGGCCCCCAACTTGGATGGCGCACCGTCTACATTATCGAATA
CCTCGGACCGCTCTTCATCCCGGCTCTCTTCCTCTTCCCCCTCCGCCCAT
ATGTCTACTTTAACTTCGACAAGCCACTTCCTGACCCATCGCAGTTCCAG
CTCCTGGTCTGCGCCCTCCTGACCATCCACTTCATCAAGCGCGAATACGA
AACCGTCTTCGTCCACCGTTTCAGCAATGCCACCATGCCCGCACGCAACA
TCGTCAAGAACAGCGGCCACTACTGGGTCCTAGCCGGTTTGAACATCGCC
TACTGGGTCTTCCGTCCCGACTCCCCCGCCGCCACCATCCAAGACTCTTT
CCTCCTCTACAGCGGTCTGGCATTGTTCATTTTCGGCGAGCTTGCGAACC
TAAACGCTCACCTTGTGCTACGCGACCTGCGCCGTCCCGGTACCACGGAA
AGAGGCATTCCCTCCGGATTTGGATTCAACGTCGTTACCTGCCCCAACTA
CTTCTTCGAGGTTGTCAGCTGGGTGGGCATCTACCTGCTGAGCGGAATGA
GCTGGAGCGTTCTCTTCTTCATTGTCGTTGGTACCGTGCAGATGGCTCTC
TGGGCTAAGAAGAAGGAACGCCGCTACCGCAAAGAGTTCGGTGACAAGTA
CAAGCGCAAGCGCTATGTTATCCTGCCCGGTCTGTACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008839-T1.utr5p1 | KJC3_008839-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263FR7 |
| DBxref | InterPro:IPR001104 |
| DBxref | PFAM:PF02544 |
| DBxref | PFAM:PF04191 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3220986..3222231 + |
|
