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KJC3_008860-T1, KJC3_008860-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008860-T1
Unique NameKJC3_008860-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3270030..3271397+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008860-T1 ID=KJC3_008860-T1|Name=KJC3_008860-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1368bp|location=Sequence derived from alignment at ch6:3270030..3271397+ (Aspergillus niger KJC3)
GAGAGCTTCACGCGCAGCCCCTGCCATGAACCATGATTCCGCCATGCGAT
CCGGTCATTCTTGAAAATAACCCTCAATTTAAGAGACTTTATACCCACCT
GACGACAACTCTACTGAACCCCGATGGCTCCACTCGCGCCCAGGATGCGC
AACCGGCTCGACAAGCCGTTGTGGAAGTACGTCCTACCTCCCAATCGTGA
CTCTAGCTCATGATATCCACTCCTGAATGGCCCTCTGACCCTGGATTACA
ATATAGGAAGTGAAAGCCTGCCGGATACGAGACGCGAAAAAGCAGATTAA
GAAGCAAGCTTTGCGACGACTGGCATTCGACCCGGACAGCGGGCTCCCCG
ACGACGTTAGCAACCACCACCTACCACTCTACAGAGAAGGCAGCCTTACT
AACAATATATCCAATCATCCAAGTGCCGAGATCCCGTCGCCATCATAACC
CTCTATCTCGAATCCTCCCCCGACTTACTCAAGCTTGACGACGACCCCAG
CGATGCAGCAACAGACGCGCAATTACTCCTCGCACCAGACATCGACGAAT
TCTACTCCAACCTCCCTCTCCTAGCCACTCCTCTATCGAACGTCCTTTCC
CAAACGCTCAACGACATCCGCACAATCGCCAATGCAGGATCATCGGACTC
CTCAGACTCCGGATCTACATCAAGACCCAATGAACCGCCCCGAACAACCC
GCGCACGCAATCGCCAGGCCATGCTCAGGTCCATCGCGCAGGTTTCACTC
GCCTCCCAGCTCGGGGACCGTATCCGCGCCCTGCGCCAGATACAATTGAC
GGAGCTTCCGGCAGCTCGGACCCGGATGGCAGCGACGGCGGCGGAGGTGC
TCGCGACGCGGGCAGCAGTGCTGGAGCGCACGGTGATGCTTCTGGAGCGG
GCGAAACATGGGGCGATGGCTCGGGCGGCGAAGGCGAAGGCGGACCATTT
GGTTGCGGTGGCTCAGGGGATAGAGGGGAAGCTTAAGTATGTATACGATC
TGTCTGAGAGAGATGAGATGGGTGTACGGGGGGCTAATGTGATCTCATCA
ATGCAGTGTCACGAAACTCGAAATTCTCGCAACGATACATACACCAGAGG
TTGTGGATGCGCTACGTAGGTATTACCAGCATCTTCGGGAAACGAGGGAA
CGGCTGGAGGAAAGACGTGCTATGGCGTTGGATGAGTTAAAGAGCTACGA
GGATAGTATCGATGGAGCCGGGCGCGGACCGATGAAGGAGCTTGCGCGAC
AGTATGGATCGTTGATTCGGGAGGTAGAGGATGTGAGGATGGAGATTGAA
CGATTGCATGTATAGTATTAATTTATGATAGATACCCTGATATGAACATG
AACCCAATACATAAGATC
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Coding sequence (CDS) from alignment at ch6:3270030..3271397+

>KJC3_008860-T1 ID=KJC3_008860-T1|Name=KJC3_008860-T1|organism=Aspergillus niger KJC3|type=CDS|length=4260bp|location=Sequence derived from alignment at ch6:3270030..3271397+ (Aspergillus niger KJC3)
ATGATTCCGCCATGCGATCCGGTCATTCTTGAAAATAACCCTCAATTTAA
GAGACTTTATACCCACCTGACGACAACTCTACTGAACCCCGATGGCTCCA
CTCGCGCCCAGGATGCGCAACCGGCTCGACAAGCCGTTGTGGAAGAAGTG
AAAGCCTGCCGGATACGAGACGCGAAAAAGCAGATTAAGAAGCAAGCTTT
GCGACGACTGGCATTCGACCCGGACAGCGGGCTCCCCGACGACTGCCGAG
ATCCCGTCGCCATCATAACCCTCTATCTCGAATCCTCCCCCGACTTACTC
AAGCTTGACGACGACCCCAGCGATGCAGCAACAGACGCGCAATTACTCCT
CGCACCAGACATCGACGAATTCTACTCCAACCTCCCTCTCCTAGCCACTC
CTCTATCGAACGTCCTTTCCCAAACGCTCAACGACATCCGCACAATCGCC
AATGCAGGATCATCGGACTCCTCAGACTCCGGATCTACATCAAGACCCAA
TGAACCGCCCCGAACAACCCGCGCACGCAATCGCCAGGCCATGCTCAGGT
CCATCGCGCAGGTTTCACTCGCCTCCCAGCTCGGGGACCGTATCCGCGCC
CTGCGCCAGATACAATTGACGGAGCTTCCGGCAGCTCGGACCCGGATGGC
AGCGACGGCGGCGGAGGTGCTCGCGACGCGGGCAGCAGTGCTGGAGCGCA
CGGTGATGCTTCTGGAGCGGGCGAAACATGGGGCGATGGCTCGGGCGGCG
AAGGCGAAGGCGGACCATTTGGTTGCGGTGGCTCAGGGGATAGAGGGGAA
GCTTAATGTCACGAAACTCGAAATTCTCGCAACGATACATACACCAGAGG
TTGTGGATGCGCTACGTAGGTATTACCAGCATCTTCGGGAAACGAGGGAA
CGGCTGGAGGAAAGACGTGCTATGGCGTTGGATGAGTTAAAGAGCTACGA
GGATAGTATCGATGGAGCCGGGCGCGGACCGATGAAGGAGCTTGCGCGAC
AGTATGGATCGTTGATTCGGGAGGTAGAGGATGTGAGGATGGAGATTGAA
CGATTGCATGTATAGATGATTCCGCCATGCGATCCGGTCATTCTTGAAAA
TAACCCTCAATTTAAGAGACTTTATACCCACCTGACGACAACTCTACTGA
ACCCCGATGGCTCCACTCGCGCCCAGGATGCGCAACCGGCTCGACAAGCC
GTTGTGGAAGAAGTGAAAGCCTGCCGGATACGAGACGCGAAAAAGCAGAT
TAAGAAGCAAGCTTTGCGACGACTGGCATTCGACCCGGACAGCGGGCTCC
CCGACGACTGCCGAGATCCCGTCGCCATCATAACCCTCTATCTCGAATCC
TCCCCCGACTTACTCAAGCTTGACGACGACCCCAGCGATGCAGCAACAGA
CGCGCAATTACTCCTCGCACCAGACATCGACGAATTCTACTCCAACCTCC
CTCTCCTAGCCACTCCTCTATCGAACGTCCTTTCCCAAACGCTCAACGAC
ATCCGCACAATCGCCAATGCAGGATCATCGGACTCCTCAGACTCCGGATC
TACATCAAGACCCAATGAACCGCCCCGAACAACCCGCGCACGCAATCGCC
AGGCCATGCTCAGGTCCATCGCGCAGGTTTCACTCGCCTCCCAGCTCGGG
GACCGTATCCGCGCCCTGCGCCAGATACAATTGACGGAGCTTCCGGCAGC
TCGGACCCGGATGGCAGCGACGGCGGCGGAGGTGCTCGCGACGCGGGCAG
CAGTGCTGGAGCGCACGGTGATGCTTCTGGAGCGGGCGAAACATGGGGCG
ATGGCTCGGGCGGCGAAGGCGAAGGCGGACCATTTGGTTGCGGTGGCTCA
GGGGATAGAGGGGAAGCTTAATGTCACGAAACTCGAAATTCTCGCAACGA
TACATACACCAGAGGTTGTGGATGCGCTACGTAGGTATTACCAGCATCTT
CGGGAAACGAGGGAACGGCTGGAGGAAAGACGTGCTATGGCGTTGGATGA
GTTAAAGAGCTACGAGGATAGTATCGATGGAGCCGGGCGCGGACCGATGA
AGGAGCTTGCGCGACAGTATGGATCGTTGATTCGGGAGGTAGAGGATGTG
AGGATGGAGATTGAACGATTGCATGTATAGATGATTCCGCCATGCGATCC
GGTCATTCTTGAAAATAACCCTCAATTTAAGAGACTTTATACCCACCTGA
CGACAACTCTACTGAACCCCGATGGCTCCACTCGCGCCCAGGATGCGCAA
CCGGCTCGACAAGCCGTTGTGGAAGAAGTGAAAGCCTGCCGGATACGAGA
CGCGAAAAAGCAGATTAAGAAGCAAGCTTTGCGACGACTGGCATTCGACC
CGGACAGCGGGCTCCCCGACGACTGCCGAGATCCCGTCGCCATCATAACC
CTCTATCTCGAATCCTCCCCCGACTTACTCAAGCTTGACGACGACCCCAG
CGATGCAGCAACAGACGCGCAATTACTCCTCGCACCAGACATCGACGAAT
TCTACTCCAACCTCCCTCTCCTAGCCACTCCTCTATCGAACGTCCTTTCC
CAAACGCTCAACGACATCCGCACAATCGCCAATGCAGGATCATCGGACTC
CTCAGACTCCGGATCTACATCAAGACCCAATGAACCGCCCCGAACAACCC
GCGCACGCAATCGCCAGGCCATGCTCAGGTCCATCGCGCAGGTTTCACTC
GCCTCCCAGCTCGGGGACCGTATCCGCGCCCTGCGCCAGATACAATTGAC
GGAGCTTCCGGCAGCTCGGACCCGGATGGCAGCGACGGCGGCGGAGGTGC
TCGCGACGCGGGCAGCAGTGCTGGAGCGCACGGTGATGCTTCTGGAGCGG
GCGAAACATGGGGCGATGGCTCGGGCGGCGAAGGCGAAGGCGGACCATTT
GGTTGCGGTGGCTCAGGGGATAGAGGGGAAGCTTAATGTCACGAAACTCG
AAATTCTCGCAACGATACATACACCAGAGGTTGTGGATGCGCTACGTAGG
TATTACCAGCATCTTCGGGAAACGAGGGAACGGCTGGAGGAAAGACGTGC
TATGGCGTTGGATGAGTTAAAGAGCTACGAGGATAGTATCGATGGAGCCG
GGCGCGGACCGATGAAGGAGCTTGCGCGACAGTATGGATCGTTGATTCGG
GAGGTAGAGGATGTGAGGATGGAGATTGAACGATTGCATGTATAGATGAT
TCCGCCATGCGATCCGGTCATTCTTGAAAATAACCCTCAATTTAAGAGAC
TTTATACCCACCTGACGACAACTCTACTGAACCCCGATGGCTCCACTCGC
GCCCAGGATGCGCAACCGGCTCGACAAGCCGTTGTGGAAGAAGTGAAAGC
CTGCCGGATACGAGACGCGAAAAAGCAGATTAAGAAGCAAGCTTTGCGAC
GACTGGCATTCGACCCGGACAGCGGGCTCCCCGACGACTGCCGAGATCCC
GTCGCCATCATAACCCTCTATCTCGAATCCTCCCCCGACTTACTCAAGCT
TGACGACGACCCCAGCGATGCAGCAACAGACGCGCAATTACTCCTCGCAC
CAGACATCGACGAATTCTACTCCAACCTCCCTCTCCTAGCCACTCCTCTA
TCGAACGTCCTTTCCCAAACGCTCAACGACATCCGCACAATCGCCAATGC
AGGATCATCGGACTCCTCAGACTCCGGATCTACATCAAGACCCAATGAAC
CGCCCCGAACAACCCGCGCACGCAATCGCCAGGCCATGCTCAGGTCCATC
GCGCAGGTTTCACTCGCCTCCCAGCTCGGGGACCGTATCCGCGCCCTGCG
CCAGATACAATTGACGGAGCTTCCGGCAGCTCGGACCCGGATGGCAGCGA
CGGCGGCGGAGGTGCTCGCGACGCGGGCAGCAGTGCTGGAGCGCACGGTG
ATGCTTCTGGAGCGGGCGAAACATGGGGCGATGGCTCGGGCGGCGAAGGC
GAAGGCGGACCATTTGGTTGCGGTGGCTCAGGGGATAGAGGGGAAGCTTA
ATGTCACGAAACTCGAAATTCTCGCAACGATACATACACCAGAGGTTGTG
GATGCGCTACGTAGGTATTACCAGCATCTTCGGGAAACGAGGGAACGGCT
GGAGGAAAGACGTGCTATGGCGTTGGATGAGTTAAAGAGCTACGAGGATA
GTATCGATGGAGCCGGGCGCGGACCGATGAAGGAGCTTGCGCGACAGTAT
GGATCGTTGATTCGGGAGGTAGAGGATGTGAGGATGGAGATTGAACGATT
GCATGTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0070652HAUS complex
Vocabulary: Biological Process
TermDefinition
GO:0051225spindle assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008860KJC3_008860Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008860-T1KJC3_008860-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008860-T1.utr5p1KJC3_008860-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008860-T1.exon1KJC3_008860-T1.exon1Aspergillus niger KJC3exon
KJC3_008860-T1.exon2KJC3_008860-T1.exon2Aspergillus niger KJC3exon
KJC3_008860-T1.exon3KJC3_008860-T1.exon3Aspergillus niger KJC3exon
KJC3_008860-T1.exon4KJC3_008860-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008860-T1.cdsKJC3_008860-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008860-T1.utr3p1KJC3_008860-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029327
DBxrefPFAM:PF14735
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3270030..3271397 +
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