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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3273542..3275823+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008863-T1 ID=KJC3_008863-T1|Name=KJC3_008863-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2282bp|location=Sequence derived from alignment at ch6:3273542..3275823+ (Aspergillus niger KJC3)
TCCCTCCATTGCTTACTACTTACCTTCACTGTTTAATGTGAGTCATTCGG
AAATATCTCTGAATATAATCTCTCAATGCGCCTCAGCAGGTCCTTCAGCC
CCTGCATCTCATCCCATACAATACTACTACAATTCCAACCCCGATATCAG
CTCCAACTGCCACTCAGCTTCCCACGACTTTACCACCACCACCATCACAA
CCACTATAAAACCATGTCCAACCCACGACCAAACCCAAATCCAAAGAAAG
AAAAACGTCCTCCACTCACCCACTTCCTCTGCCTCCCCCTCATCAACGCC
ACCTCCCTCCCACAACTCGAATCCTCCCTCGCAACCTTTAAAGCCTCGGT
CCCAACTTTCCAACCTCCACAAGATCAACACCAGCACCATCATGAACACC
ACCAACACCAACCCCAACCCCTCATCCCCCCCTCCGCCCACCGCCCCGTC
GGCACTCTCCACCTCACCCTCGGCGTAATGAGCCTCCCCACTCCCGACCG
TCTCTCCCAAGCAATCCGCTTCCTGCACTCTCTCGACCTAGAAGCCATGC
TTCGCGAAACCCCACAATCAGAAGCAGCATCATCAGCAGCAGCAGCAGCA
CCAGAAGCAACCGCATCTCCCTTCCTCATCTCCCTAGAATCCCTACACGC
TATTCCCCGCGCCAAGGCAGCAACGGTTCTGCATGCCGCGCCGGTGGATC
CTACGAACCGCCTGTATCCGTTTTGTGTGAGGTTGAGGGATAGGTTTCTG
GAGGAAGGATTTTTGGTAGGGGATAAGCCAGCGCCGGCGCCCGTGCCGGC
GGAGGGTGGAGGGGAAGGAAGTGGTGGGGTGGATATAGGTGGTGAGGAGC
AGCAGAGGCAGATGGATTTAGCTGAGGATAGTGCAAGGGAGGGTGGGATG
ATGGTGCCTGCGCCGACATCTGCAACTGCAGCTGCGCCTGTGGAATCTAA
GCCCAAGGTACGGCCATTGTTACTGCATGCTACAATTGTGAACACTATCT
ATGCGAAGGGGAAAGGTGGTGGTCATGGTGGTCGGGGAGGCAGAGGTGGT
AGGGGAGGGGATGGCAAGGGCGATAAGAGGAAGAGGCAGTATACCTTTGA
TGCGAGAGAGATTCTTGCTAGGTATCGCAATTATACGTCTCCTGGGGAGA
GTGTCGAGAGTACTGAGGCTGTTCCTAATGCCGCAGTTCCTGATAATGAA
GGCTCAGGGTCAGAGGGTGAGGGTAGCCTTTCCAAACGGAAAGGCACACC
CTTCGTCTGGGCGAGGGATTTCCCCATCGAGTCGGTATGTATCTGTGAAA
TGGGGGCCAAGAAGCTCGTGCCGGACCTTAATGGCAAGGACGAGGGCATG
AATGCACGACTAGGGGAGAAATATCGCGTCGTAGCGGAGAAGAGTCTGCT
GTTCGGTCTGTGATATCTTTAATATCGAGTGGCTAAAAGAGCAGCAGCAA
CATGTACATACATAGTCTACAACCAGGGTGTAACGGTAACAACAGTAGAC
AAACGCCAAACACCACGCTGAAAGACACATCCTCTCAACCACCAAACAAT
AACCTCAACTACCTCACCTTACTCATCAACGTCTCCATTCCCCTCTCAAC
CGACAACTCCGCCGCCTTCGCCTTAACAGCACTAATCATACTGCGTTCAA
AATCATCCCTCGTCCTCAACACAGCCTCAACCCACGAGAGCTGCAAATCC
CAATACTCCGTCTTAAAGTTCTCATACACAGCGACCAAAGCAGGGCCCTT
CTCCGACTCCAGCAGCCGAACCAACCAATCCACCAACCGCCACTTCATCT
TAATAGTGCCGGCAAACGAATCCGGATAATTCTGGAAGAAAGCAAACACT
GTAAGGACATCATCCTTGAATTTATCCGTGTACGGATCGGTATTGTGCCG
GAACTTGACGCCCTTGTTGCGCACAGAAGACAAGTATTTGACGAGTAACT
CGTCGGAGAGTTCCTCGACCAGGATATCCGTAAGAGAGGGGTGCAGGACG
GGGGAGTAATCCGCCATATAGTCTTCGAAGGTTGAAGTGATACGTTTGAC
AGCGAAATCGCCGTACCATTTCTGGGTGAAGAAGTCGGGGATAGTGGTGC
GGAAGTCGACGGCGAAGATGAGTTCAACGAACTGGGTGAGGCAGTGGGTG
CTGAGATCGACGTAGCCGTCGCGCAGGGCGTCGAGTTCCGGAATGGCTCG
GGAGGCCATGTAACTCGGGTCGACGATGGTTTCGAAGTCGCGTTTGAAGC
GGCTGAGGTAGCCCAGCTGGCCGGTCTCTTCG back to topCoding sequence (CDS) from alignment at ch6:3273542..3275823+ >KJC3_008863-T1 ID=KJC3_008863-T1|Name=KJC3_008863-T1|organism=Aspergillus niger KJC3|type=CDS|length=1338bp|location=Sequence derived from alignment at ch6:3273542..3275823+ (Aspergillus niger KJC3)
ATGCGCCTCAGCAGGTCCTTCAGCCCCTGCATCTCATCCCATACAATACT
ACTACAATTCCAACCCCGATATCAGCTCCAACTGCCACTCAGCTTCCCAC
GACTTTACCACCACCACCATCACAACCACTATAAAACCATGTCCAACCCA
CGACCAAACCCAAATCCAAAGAAAGAAAAACGTCCTCCACTCACCCACTT
CCTCTGCCTCCCCCTCATCAACGCCACCTCCCTCCCACAACTCGAATCCT
CCCTCGCAACCTTTAAAGCCTCGGTCCCAACTTTCCAACCTCCACAAGAT
CAACACCAGCACCATCATGAACACCACCAACACCAACCCCAACCCCTCAT
CCCCCCCTCCGCCCACCGCCCCGTCGGCACTCTCCACCTCACCCTCGGCG
TAATGAGCCTCCCCACTCCCGACCGTCTCTCCCAAGCAATCCGCTTCCTG
CACTCTCTCGACCTAGAAGCCATGCTTCGCGAAACCCCACAATCAGAAGC
AGCATCATCAGCAGCAGCAGCAGCACCAGAAGCAACCGCATCTCCCTTCC
TCATCTCCCTAGAATCCCTACACGCTATTCCCCGCGCCAAGGCAGCAACG
GTTCTGCATGCCGCGCCGGTGGATCCTACGAACCGCCTGTATCCGTTTTG
TGTGAGGTTGAGGGATAGGTTTCTGGAGGAAGGATTTTTGGTAGGGGATA
AGCCAGCGCCGGCGCCCGTGCCGGCGGAGGGTGGAGGGGAAGGAAGTGGT
GGGGTGGATATAGGTGGTGAGGAGCAGCAGAGGCAGATGGATTTAGCTGA
GGATAGTGCAAGGGAGGGTGGGATGATGGTGCCTGCGCCGACATCTGCAA
CTGCAGCTGCGCCTGTGGAATCTAAGCCCAAGGTACGGCCATTGTTACTG
CATGCTACAATTGTGAACACTATCTATGCGAAGGGGAAAGGTGGTGGTCA
TGGTGGTCGGGGAGGCAGAGGTGGTAGGGGAGGGGATGGCAAGGGCGATA
AGAGGAAGAGGCAGTATACCTTTGATGCGAGAGAGATTCTTGCTAGGTAT
CGCAATTATACGTCTCCTGGGGAGAGTGTCGAGAGTACTGAGGCTGTTCC
TAATGCCGCAGTTCCTGATAATGAAGGCTCAGGGTCAGAGGGTGAGGGTA
GCCTTTCCAAACGGAAAGGCACACCCTTCGTCTGGGCGAGGGATTTCCCC
ATCGAGTCGGTATGTATCTGTGAAATGGGGGCCAAGAAGCTCGTGCCGGA
CCTTAATGGCAAGGACGAGGGCATGAATGCACGACTAGGGGAGAAATATC
GCGTCGTAGCGGAGAAGAGTCTGCTGTTCGGTCTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008863-T1.utr5p1 | KJC3_008863-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019510 |
| DBxref | PFAM:PF10469 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3273542..3275823 + |
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