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KJC3_008873-T1, KJC3_008873-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008873-T1
Unique NameKJC3_008873-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3305733..3308028-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008873-T1 ID=KJC3_008873-T1|Name=KJC3_008873-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2296bp|location=Sequence derived from alignment at ch6:3305733..3308028- (Aspergillus niger KJC3)
CACTCACCATGTCCCGGGGCATCCCCCCGTCATCGCCTGGCCTCCCACCT TGATATAGTTGGTTTGTGGAGTGAGCGATCCCTCCGCCGCCATGGATAAA TTAACCAGGAATGACCCGCTGGGCGAGTTTGTCTGTCGCTTCCCCAACTG TGATGCCCGATACCGGCGTAAAGAGCACCTCCGCCGCCATGAGGCCAAAC ATATCCAAGATCGGACATATCCCTGTTCCATCTGTGGTCAGGAATTCGGA CGAAAGTATAAACCGAGATAGCTTGCAGCGCGCAAGGATCCTACGTGCTT GTTGTTCTGTCATTAGTAACGTGCGTTAGTGACACACTGCGTCGACATCT ACGAGTGAAACATCAGTTGAATGAACCTGTCCACCGAGCACGACGCGCCT GTTCCAACTGTCGGGCCATCAAGGCTCGATGTGAAGGGAAGCCCGTTTGC ACAGAATGTCAGCATCGGGGCATTCGCTGCTCTCTCCGCGAGGCTGAAGA CTCGCCGGCGCCCGAACCCCGACCAGCGTCCGTGAGCCCGCGGCCAGCGG TGTCCAGAGAAGAACAGTTTGTAAAAATGTTCTTTGAGCTGTTCCACCCG CATTGGCCATTTGTGCATCGGGGGACTTTTCGCATTCGCCATGAAATTCC CATGTTGGTCCAGTCCATGGTAGTGCTGGGCTTGTGGGCGAGCGGAGAAA GAGGCGCGCGGTGTGCAGCTGTCGAGCTACATGAGCAGCTTAATTCGGCA ATTCTTCAGCAAAAGGTAGATGCAGATCTATTGTGGTTATATACTGAATG CTAATGCAGCTGCAGGAGAAATGGGATGTGTCCAATGAAGTACCTATACC CCAGGCGGGGTCATGGCCATTGCCCATTTACCAGGCGATCCTATTACATG TCATCTTCTCTTTGATTTATAAAACGCACGGCTCTCTCGGGATAGATCTT AAGCCGTCTGGGCTGCGGACTGATACTGAGCTGCTGCTTAAGTGTCTGAT CCGGAGCTGCCGCCTCAGGGGCATGTTCTACTACCCGCGCATCCTGCAGC AGTATCAAGAACCCGCGATTGCTCAATATATGCTGGTCAGTATTGAGGAA GTGAAACGGTTCAATATTGCTTTGTACAAAGTGTGCACGACGATCTATGG GTCGACGGCGCTGAGCCAGATGGTGGATGGGGCATCGATGGGCAACATCT TGTTAACCGCGGATGAATTGCAGTTTCCGCTGCCGGAGAACCATGAGTTG TGGGATGCAGGGACACAATCAGAGTGGGATCGAGCGCTGGAGGGGATGAG TGTGGATGGGTTGGGGGAGTATCGCGAGGAGGAATGGATATCGAAGCAGG CTCGGATGATGCATGTATTGGGGAATATTTAGCTTCACCACATACTATCC TATACTTGCAGTGGCTGCAGCATATCACTACAACCTACGAACACATAATG TTCAGTCAAAAACATAAAATAAAAACAGTTAACTCCACTAACCCTACATA AGAGAACAACCGCACTCCACCTCTCTGAACAACCAACTAGCACTACCGAA TCATAAAATCTAAGCCTCCACCCCATCCCTCTCATTCTTCGTGATGGTAT CCACAATCGCCGTCTCCAAATGCGGAATAACCGGATCCTTCTGCACTCTC AACCCCTTCGTCATCCTCGCAATCGTAGTATAAAACCCCAGAACGACAAA ACACTCCACGACCTCATCATCCGACATAATCCTCTTGGCCCACAGAATCG TCTCCTCCTTATTGTCGTACGTGCGAATCGACTCCTCCACAAGTGTCAGA ATACACTGCTGGCGCTCCGTCCACGTGCCCATAGCGATCAATTCCTTCGA GGTCAGGCCCTTGCGCAGCGCCTCAATCTTGTCGTCGCCGAGCCCGTTGA GGCGCGAGATGGGCTCGTTGATGCCGAAGAGGTACTCTGCGTTGATGAGA CCCGTCATGCGGAGTACAATAAGCTGGTAGTCGAGGAGCTGGATGGTGCG CTTTTCGCCGGAGAGGATGCTGTCCAGGACGGACATGATGGGGAGGAAGG TTCCTGGGGAGCGGGCGTACAGGCGGAAGACGGCGCGGTCGATGGGGAAG GACCGCAGGAAGGCGGCGTTGGCTTCGTGTGCTGGGGAGGGGTTGTGGAT GTCGATGCCTTCGATTAGGGGGTATTTGGTTGTCATTTTGGTGGTGGTGG TGGTGGCGTTGTGAAAGTTTGAGGGATTGTTTCTGAGTGAGTGTGTTGGA AGATGTTGTATAAGATTATGCAGATGTCTGTGGTAGGGTAGAAGGG
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Coding sequence (CDS) from alignment at ch6:3305733..3308028-

>KJC3_008873-T1 ID=KJC3_008873-T1|Name=KJC3_008873-T1|organism=Aspergillus niger KJC3|type=CDS|length=3501bp|location=Sequence derived from alignment at ch6:3305733..3308028- (Aspergillus niger KJC3)
GAGAAATGGGATGTGTCCAATGAAGTACCTATACCCCAGGCGGGGTCATG
GCCATTGCCCATTTACCAGGCGATCCTATTACATGTCATCTTCTCTTTGA
TTTATAAAACGCACGGCTCTCTCGGGATAGATCTTAAGCCGTCTGGGCTG
CGGACTGATACTGAGCTGCTGCTTAAGTGTCTGATCCGGAGCTGCCGCCT
CAGGGGCATGTTCTACTACCCGCGCATCCTGCAGCAGTATCAAGAACCCG
CGATTGCTCAATATATGCTGGTCAGTATTGAGGAAGTGAAACGGTTCAAT
ATTGCTTTGTACAAAGTGTGCACGACGATCTATGGGTCGACGGCGCTGAG
CCAGATGGTGGATGGGGCATCGATGGGCAACATCTTGTTAACCGCGGATG
AATTGCAGTTTCCGCTGCCGGAGAACCATGAGTTGTGGGATGCAGGGACA
CAATCAGAGTGGGATCGAGCGCTGGAGGGGATGAGTGTGGATGGGTTGGG
GGAGTATCGCGAGGAGGAATGGATATCGAAGCAGGCTCGGATGATGCATG
TATTGGGGAATATTTAGTGACACACTGCGTCGACATCTACGAGTGAAACA
TCAGTTGAATGAACCTGTCCACCGAGCACGACGCGCCTGTTCCAACTGTC
GGGCCATCAAGGCTCGATGTGAAGGGAAGCCCGTTTGCACAGAATGTCAG
CATCGGGGCATTCGCTGCTCTCTCCGCGAGGCTGAAGACTCGCCGGCGCC
CGAACCCCGACCAGCGTCCGTGAGCCCGCGGCCAGCGGTGTCCAGAGAAG
AACAGTTTGTAAAAATGTTCTTTGAGCTGTTCCACCCGCATTGGCCATTT
GTGCATCGGGGGACTTTTCGCATTCGCCATGAAATTCCCATGTTGGTCCA
GTCCATGGTAGTGCTGGGCTTGTGGGCGAGCGGAGAAAGAGGCGCGCGGT
GTGCAGCTGTCGAGCTACATGAGCAGCTTAATTCGGCAATTCTTCAGCAA
AAGATGGATAAATTAACCAGGAATGACCCGCTGGGCGAGTTTGTCTGTCG
CTTCCCCAACTGTGATGCCCGATACCGGCGTAAAGAGCACCTCCGCCGCC
ATGAGGCCAAACATATCCAAGATCGGACATATCCCTGTTCCATCTGTGGT
CAGGAATTCGGACGAAAGAGAAATGGGATGTGTCCAATGAAGTACCTATA
CCCCAGGCGGGGTCATGGCCATTGCCCATTTACCAGGCGATCCTATTACA
TGTCATCTTCTCTTTGATTTATAAAACGCACGGCTCTCTCGGGATAGATC
TTAAGCCGTCTGGGCTGCGGACTGATACTGAGCTGCTGCTTAAGTGTCTG
ATCCGGAGCTGCCGCCTCAGGGGCATGTTCTACTACCCGCGCATCCTGCA
GCAGTATCAAGAACCCGCGATTGCTCAATATATGCTGGTCAGTATTGAGG
AAGTGAAACGGTTCAATATTGCTTTGTACAAAGTGTGCACGACGATCTAT
GGGTCGACGGCGCTGAGCCAGATGGTGGATGGGGCATCGATGGGCAACAT
CTTGTTAACCGCGGATGAATTGCAGTTTCCGCTGCCGGAGAACCATGAGT
TGTGGGATGCAGGGACACAATCAGAGTGGGATCGAGCGCTGGAGGGGATG
AGTGTGGATGGGTTGGGGGAGTATCGCGAGGAGGAATGGATATCGAAGCA
GGCTCGGATGATGCATGTATTGGGGAATATTTAGTGACACACTGCGTCGA
CATCTACGAGTGAAACATCAGTTGAATGAACCTGTCCACCGAGCACGACG
CGCCTGTTCCAACTGTCGGGCCATCAAGGCTCGATGTGAAGGGAAGCCCG
TTTGCACAGAATGTCAGCATCGGGGCATTCGCTGCTCTCTCCGCGAGGCT
GAAGACTCGCCGGCGCCCGAACCCCGACCAGCGTCCGTGAGCCCGCGGCC
AGCGGTGTCCAGAGAAGAACAGTTTGTAAAAATGTTCTTTGAGCTGTTCC
ACCCGCATTGGCCATTTGTGCATCGGGGGACTTTTCGCATTCGCCATGAA
ATTCCCATGTTGGTCCAGTCCATGGTAGTGCTGGGCTTGTGGGCGAGCGG
AGAAAGAGGCGCGCGGTGTGCAGCTGTCGAGCTACATGAGCAGCTTAATT
CGGCAATTCTTCAGCAAAAGATGGATAAATTAACCAGGAATGACCCGCTG
GGCGAGTTTGTCTGTCGCTTCCCCAACTGTGATGCCCGATACCGGCGTAA
AGAGCACCTCCGCCGCCATGAGGCCAAACATATCCAAGATCGGACATATC
CCTGTTCCATCTGTGGTCAGGAATTCGGACGAAAGAGAAATGGGATGTGT
CCAATGAAGTACCTATACCCCAGGCGGGGTCATGGCCATTGCCCATTTAC
CAGGCGATCCTATTACATGTCATCTTCTCTTTGATTTATAAAACGCACGG
CTCTCTCGGGATAGATCTTAAGCCGTCTGGGCTGCGGACTGATACTGAGC
TGCTGCTTAAGTGTCTGATCCGGAGCTGCCGCCTCAGGGGCATGTTCTAC
TACCCGCGCATCCTGCAGCAGTATCAAGAACCCGCGATTGCTCAATATAT
GCTGGTCAGTATTGAGGAAGTGAAACGGTTCAATATTGCTTTGTACAAAG
TGTGCACGACGATCTATGGGTCGACGGCGCTGAGCCAGATGGTGGATGGG
GCATCGATGGGCAACATCTTGTTAACCGCGGATGAATTGCAGTTTCCGCT
GCCGGAGAACCATGAGTTGTGGGATGCAGGGACACAATCAGAGTGGGATC
GAGCGCTGGAGGGGATGAGTGTGGATGGGTTGGGGGAGTATCGCGAGGAG
GAATGGATATCGAAGCAGGCTCGGATGATGCATGTATTGGGGAATATTTA
GTGACACACTGCGTCGACATCTACGAGTGAAACATCAGTTGAATGAACCT
GTCCACCGAGCACGACGCGCCTGTTCCAACTGTCGGGCCATCAAGGCTCG
ATGTGAAGGGAAGCCCGTTTGCACAGAATGTCAGCATCGGGGCATTCGCT
GCTCTCTCCGCGAGGCTGAAGACTCGCCGGCGCCCGAACCCCGACCAGCG
TCCGTGAGCCCGCGGCCAGCGGTGTCCAGAGAAGAACAGTTTGTAAAAAT
GTTCTTTGAGCTGTTCCACCCGCATTGGCCATTTGTGCATCGGGGGACTT
TTCGCATTCGCCATGAAATTCCCATGTTGGTCCAGTCCATGGTAGTGCTG
GGCTTGTGGGCGAGCGGAGAAAGAGGCGCGCGGTGTGCAGCTGTCGAGCT
ACATGAGCAGCTTAATTCGGCAATTCTTCAGCAAAAGATGGATAAATTAA
CCAGGAATGACCCGCTGGGCGAGTTTGTCTGTCGCTTCCCCAACTGTGAT
GCCCGATACCGGCGTAAAGAGCACCTCCGCCGCCATGAGGCCAAACATAT
CCAAGATCGGACATATCCCTGTTCCATCTGTGGTCAGGAATTCGGACGAA
A
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008873KJC3_008873Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008873-T1KJC3_008873-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008873-T1.cdsKJC3_008873-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008873-T1.utr3p1KJC3_008873-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008873-T1.exon3KJC3_008873-T1.exon3Aspergillus niger KJC3exon
KJC3_008873-T1.exon2KJC3_008873-T1.exon2Aspergillus niger KJC3exon
KJC3_008873-T1.exon1KJC3_008873-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008873-T1.utr5p1KJC3_008873-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_6.18
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3305733..3308028 -