|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3342855..3344299+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008883-T1 ID=KJC3_008883-T1|Name=KJC3_008883-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1445bp|location=Sequence derived from alignment at ch6:3342855..3344299+ (Aspergillus niger KJC3) GGCTGTGTTTTACACATAGACCTCGTATCTAATCCAAGAGAGTTGATCTA
TCACATCGGATGCAATCATTCATTGCGAGCAAACAAACACTCGGAATTCT
GAGAGTTAAGTAAAGTACGTACCTGGCTGGCAGCCAGACCAAACAAACAC
AGCCTTGGCATGTTTGTTCCCCCGACATCCGCATCCGCAATATCGCAACT
TCGGCTTCAATTCTGCCAGACCAGCGCTGCAGCTAGTTCAGCTATATTAT
CTCTGCCATTGACGATGCGCGTCGCATCCAATCACTTCCTCTAGGTACAT
ACCACCAATCCCAATCTATATCTACCAAACCCAACAACTAACACCGTCCA
CCCAGTCCATCCTTCCTCACCCCAAACCACAAACCTCCAATCCAACCCAA
TCTACACATACAAACAACACACCAAATACATCCCCCCAAAATGCTCCGCC
CAACCTCAACCTCAACCACCACCACCCTCCTCCGCACCCTCCGCACCCTC
ACAACCATCACCACAAAACGACACCACTCCTCCGTCTCCGCCAATGAACT
CTCTCACTTCTCCTCCCTCGCCACATCCTGGTGGGATCCCCAAGGGCCCT
CGCGCGTCCTCCACCTCATGAACCCCGTTCGCCACGACTTCATCGCCTCA
TGCCTGGCCGAATCGACCCCGATAAGCAGCACGACGCCGTCCTCGCCCAT
GGACGCCTCCAACACCCACAACAAGAACAACCTCCGGTACCTCGACATCG
GCTGCGGAGGGGGCATCTTCGCGGAGTCATTAGCGCGCACGATCCCAGCC
TCATCCTCATCCTCAGAAGGAACTCTGACCCGCACGCGCGCCGCCTCAAT
AACAGCGCTGGACCCCAGCCCCACGCTGATAAAGATCGCGCGGGACCACG
CGCGCCTCGACCCCTCCGTGCAGGCGCATCTGGATAGTGGGCGGTTCAAG
TATGTGAATGCGTCGTTGGAGGAGTTTATTCCTACTCTACAGACAGAAGA
GAGAAGATTCGATATCGTGACCCTCTTCGAAGTGCTCGAACATATCGATA
ATATCCCCGGGTCTATCACCCCGCAGAGCTTCCTGTCGAATTGTTTGTCG
ATGGTGAAGCCCGGTGGATGGCTGATCGGGTCTACGATTGCGAGGACGTT
CCCGTCGTGGTTGGTTAATCAGGTTGTTGCGGAGGCGCCGTGGCCGATTG
GGGTGGTGCCGAAGGGGACGCATGAGTGGAAGAAGTTTGTGAATCCGGGG
GAGTTGGAGGGGTGGGTGCAGGAGGGGTTGATGAGGGGGTTGGATGGGAG
GGCTGCTCGGGGCGGGAGTGAGGCGTTGGAGGGGGCGAAATGGAGGTGTG
AGGGGGTGGTGTATTTCCCGGGGTTGGGGTGGAAGTTGGTCAAGGGGTCG
GAGAGTTGGGGGAATTATTTCTGGGCTGTGAGGAAGGGATTGTAA back to topCoding sequence (CDS) from alignment at ch6:3342855..3344299+ >KJC3_008883-T1 ID=KJC3_008883-T1|Name=KJC3_008883-T1|organism=Aspergillus niger KJC3|type=CDS|length=1005bp|location=Sequence derived from alignment at ch6:3342855..3344299+ (Aspergillus niger KJC3) ATGCTCCGCCCAACCTCAACCTCAACCACCACCACCCTCCTCCGCACCCT CCGCACCCTCACAACCATCACCACAAAACGACACCACTCCTCCGTCTCCG CCAATGAACTCTCTCACTTCTCCTCCCTCGCCACATCCTGGTGGGATCCC CAAGGGCCCTCGCGCGTCCTCCACCTCATGAACCCCGTTCGCCACGACTT CATCGCCTCATGCCTGGCCGAATCGACCCCGATAAGCAGCACGACGCCGT CCTCGCCCATGGACGCCTCCAACACCCACAACAAGAACAACCTCCGGTAC CTCGACATCGGCTGCGGAGGGGGCATCTTCGCGGAGTCATTAGCGCGCAC GATCCCAGCCTCATCCTCATCCTCAGAAGGAACTCTGACCCGCACGCGCG CCGCCTCAATAACAGCGCTGGACCCCAGCCCCACGCTGATAAAGATCGCG CGGGACCACGCGCGCCTCGACCCCTCCGTGCAGGCGCATCTGGATAGTGG GCGGTTCAAGTATGTGAATGCGTCGTTGGAGGAGTTTATTCCTACTCTAC AGACAGAAGAGAGAAGATTCGATATCGTGACCCTCTTCGAAGTGCTCGAA CATATCGATAATATCCCCGGGTCTATCACCCCGCAGAGCTTCCTGTCGAA TTGTTTGTCGATGGTGAAGCCCGGTGGATGGCTGATCGGGTCTACGATTG CGAGGACGTTCCCGTCGTGGTTGGTTAATCAGGTTGTTGCGGAGGCGCCG TGGCCGATTGGGGTGGTGCCGAAGGGGACGCATGAGTGGAAGAAGTTTGT GAATCCGGGGGAGTTGGAGGGGTGGGTGCAGGAGGGGTTGATGAGGGGGT TGGATGGGAGGGCTGCTCGGGGCGGGAGTGAGGCGTTGGAGGGGGCGAAA TGGAGGTGTGAGGGGGTGGTGTATTTCCCGGGGTTGGGGTGGAAGTTGGT CAAGGGGTCGGAGAGTTGGGGGAATTATTTCTGGGCTGTGAGGAAGGGAT TGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0008425 | 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity |
Vocabulary: Biological Process
Term | Definition |
GO:0006744 | ubiquinone biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008883-T1.utr5p1 | KJC3_008883-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | BUSCO:EOG09263SZM |
DBxref | InterPro:IPR029063 |
DBxref | InterPro:IPR010233 |
DBxref | PFAM:PF13847 |
DBxref | PFAM:PF13649 |
DBxref | PFAM:PF13489 |
DBxref | PFAM:PF08242 |
DBxref | PFAM:PF08241 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:3342855..3344299 + |
|