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KJC3_008893-T1, KJC3_008893-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008893-T1
Unique NameKJC3_008893-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3378284..3379215+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008893-T1 ID=KJC3_008893-T1|Name=KJC3_008893-T1|organism=Aspergillus niger KJC3|type=mRNA|length=932bp|location=Sequence derived from alignment at ch6:3378284..3379215+ (Aspergillus niger KJC3)
GACTTTCTTTCTACTTAAGCTATTATTTATCTACAACCCTTTCTCTTCAC
CACACCCTCCCACCACAACACACACCCAAATCCCTCCCTCCCCCCTACCA
AAGGGAGCAAAATCAACACAATGGGACTAACCCGCCCCTACCTCCTCCTC
TACAACGCCCTCTCCCTAACCCTCTGGGCAACATGCACCATCCGCGGCCT
CTCCCTCCTCCCATCCACCAGCATCCCCAAGATATTCAATGATGTCTACA
CCACCCTCCTAACAACCCAATCCCTCGCCCTCCTCGAGATCCTCCACAGT
CTGCTCCGTCTCGTCCGCGCCCCGGTCCTCACTACCGCTATGCAGGTCGC
TAGTCGCATACTTCTCGTTTGGGGCATCATGTATCCGTTCCAGGGCGTTC
TCGTGGGTGGAAGTGAGGAGGCGGGGCTTGGTGACTATGCGTTCCTGGGT
TGTTTGAGCGCCTGGGGTGTTACTGAGTGTATTCGCTATGGGTTCTTTGC
GTTGCAGTTGTCCGGAGTGGGTGTGCCGGGGTGGTGGGCTTGGTTGAGGT
ATGTTTCTATTTCATGTTTCATTTGTGTGTTTGGTGGAGTAAATGCTAAT
GTGTGTGTGTTTGTGTGAAGGTATAATACGTTCTATGTGCTCTATCCGCT
GGGTATTACGAGTGAGTGTGTTATGGTGTTTAAGGCGTTGGGGCCGGCGG
GGGAGTTGGTGAGTCCGCTGTATAAGTGGTTCTTGGTCGCGGTGTTGGGG
ATTTATGTTCCTGGTGAGTTTATCTTCTTCCTTGGGGGAGATGGTTGAGG
TTTATTGCTGATCAAGGGCGTGTGCTAATTGTTTAGGATCGTATATTTTG
TATACGCATATGATTGCACAGAGGCGCAAGGCGATGAAGAAGAAATAAGT
GCGTGCGTTGTTTGGTTGGGTGAAGATAAAGG
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Coding sequence (CDS) from alignment at ch6:3378284..3379215+

>KJC3_008893-T1 ID=KJC3_008893-T1|Name=KJC3_008893-T1|organism=Aspergillus niger KJC3|type=CDS|length=1899bp|location=Sequence derived from alignment at ch6:3378284..3379215+ (Aspergillus niger KJC3)
ATGGGACTAACCCGCCCCTACCTCCTCCTCTACAACGCCCTCTCCCTAAC
CCTCTGGGCAACATGCACCATCCGCGGCCTCTCCCTCCTCCCATCCACCA
GCATCCCCAAGATATTCAATGATGTCTACACCACCCTCCTAACAACCCAA
TCCCTCGCCCTCCTCGAGATCCTCCACAGTCTGCTCCGTCTCGTCCGCGC
CCCGGTCCTCACTACCGCTATGCAGGTCGCTAGTCGCATACTTCTCGTTT
GGGGCATCATGTATCCGTTCCAGGGCGTTCTCGTGGGTGGAAGTGAGGAG
GCGGGGCTTGGTGACTATGCGTTCCTGGGTTGTTTGAGCGCCTGGGGTGT
TACTGAGTGTATTCGCTATGGGTTCTTTGCGTTGCAGTTGTCCGGAGTGG
GTGTGCCGGGGTGGTGGGCTTGGTTGAGGTATAATACGTTCTATGTGCTC
TATCCGCTGGGTATTACGAGTGAGTGTGTTATGGTGTTTAAGGCGTTGGG
GCCGGCGGGGGAGTTGGTGAGTCCGCTGTATAAGTGGTTCTTGGTCGCGG
TGTTGGGGATTTATGTTCCTGGATCGTATATTTTGTATACGCATATGATT
GCACAGAGGCGCAAGGCGATGAAGAAGAAATAAATGGGACTAACCCGCCC
CTACCTCCTCCTCTACAACGCCCTCTCCCTAACCCTCTGGGCAACATGCA
CCATCCGCGGCCTCTCCCTCCTCCCATCCACCAGCATCCCCAAGATATTC
AATGATGTCTACACCACCCTCCTAACAACCCAATCCCTCGCCCTCCTCGA
GATCCTCCACAGTCTGCTCCGTCTCGTCCGCGCCCCGGTCCTCACTACCG
CTATGCAGGTCGCTAGTCGCATACTTCTCGTTTGGGGCATCATGTATCCG
TTCCAGGGCGTTCTCGTGGGTGGAAGTGAGGAGGCGGGGCTTGGTGACTA
TGCGTTCCTGGGTTGTTTGAGCGCCTGGGGTGTTACTGAGTGTATTCGCT
ATGGGTTCTTTGCGTTGCAGTTGTCCGGAGTGGGTGTGCCGGGGTGGTGG
GCTTGGTTGAGGTATAATACGTTCTATGTGCTCTATCCGCTGGGTATTAC
GAGTGAGTGTGTTATGGTGTTTAAGGCGTTGGGGCCGGCGGGGGAGTTGG
TGAGTCCGCTGTATAAGTGGTTCTTGGTCGCGGTGTTGGGGATTTATGTT
CCTGGATCGTATATTTTGTATACGCATATGATTGCACAGAGGCGCAAGGC
GATGAAGAAGAAATAAATGGGACTAACCCGCCCCTACCTCCTCCTCTACA
ACGCCCTCTCCCTAACCCTCTGGGCAACATGCACCATCCGCGGCCTCTCC
CTCCTCCCATCCACCAGCATCCCCAAGATATTCAATGATGTCTACACCAC
CCTCCTAACAACCCAATCCCTCGCCCTCCTCGAGATCCTCCACAGTCTGC
TCCGTCTCGTCCGCGCCCCGGTCCTCACTACCGCTATGCAGGTCGCTAGT
CGCATACTTCTCGTTTGGGGCATCATGTATCCGTTCCAGGGCGTTCTCGT
GGGTGGAAGTGAGGAGGCGGGGCTTGGTGACTATGCGTTCCTGGGTTGTT
TGAGCGCCTGGGGTGTTACTGAGTGTATTCGCTATGGGTTCTTTGCGTTG
CAGTTGTCCGGAGTGGGTGTGCCGGGGTGGTGGGCTTGGTTGAGGTATAA
TACGTTCTATGTGCTCTATCCGCTGGGTATTACGAGTGAGTGTGTTATGG
TGTTTAAGGCGTTGGGGCCGGCGGGGGAGTTGGTGAGTCCGCTGTATAAG
TGGTTCTTGGTCGCGGTGTTGGGGATTTATGTTCCTGGATCGTATATTTT
GTATACGCATATGATTGCACAGAGGCGCAAGGCGATGAAGAAGAAATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008893KJC3_008893Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008893-T1KJC3_008893-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008893-T1.utr5p1KJC3_008893-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008893-T1.exon1KJC3_008893-T1.exon1Aspergillus niger KJC3exon
KJC3_008893-T1.exon2KJC3_008893-T1.exon2Aspergillus niger KJC3exon
KJC3_008893-T1.exon3KJC3_008893-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008893-T1.cdsKJC3_008893-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008893-T1.utr3p1KJC3_008893-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007482
DBxrefPFAM:PF04387
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3378284..3379215 +
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