|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3417748..3419912- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008906-T1 ID=KJC3_008906-T1|Name=KJC3_008906-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2165bp|location=Sequence derived from alignment at ch6:3417748..3419912- (Aspergillus niger KJC3)
ATGGCTGCCCAGTCGCTGAGCTCGTTGCTGCAACGAGCATCCATTGACGA
CCACGAGGAAGTCCTGCAGTCATGCAATGCCGCGTTGGCCAAGTCGAAGT
CGGACTTGCATGCTCAGCATATCAAGGCAGTTGCTCTGCTGAAGCTTGAC
CGCTATGAGGACTGCCTGCGAGTATTCGAAGAAGCCGGTGATGGTCTGAA
GAAGAGAGCAGCTCTGGAATACGCCTACGCTCTATATAAATGCGGTCAGC
TGGACCCGGCGATTGAGGTGGTATCTCGCGTCGCTGGTGAGAGGGGCGCA
CTACATTTGGAGGCTCAAGCCGTACGTTATTGCTTCCCATAAGCATATCT
ACTCCCAGACATCTTCTGTCATAGTCTGTCCGCTCATCCTAACTCTCATC
TTCCTTAAAGAGCTACCGTTCAGAGAAATTCCGTCGCGCTGCCGAGATTT
ACGAAGAATTGTCCAAAGGCGATGCGTCCCTGTCGAACGAAGAGAACGAC
TTGCGCATCAACTCATGGGCCACGGATGCACAGCTGCAGTGGAAGGGCTA
CCCCCAGTTTGTACGCCATAACAGGCCGATGCGGGATGATCTAGAGGCGT
TCGAGACTGTCTATAACGCAGCTTGCTTGAGTATCGCCAAGGGCGAGTTC
CAGCAGGGGCAAGTTCTATTGACTCGGGCTAAAGGTTCGTGTGGTCAACC
CCGGATGGCGCACAAGAATGGTAGCTGATTAGCTTCACACAGAGCTCTGT
CGGACGTCGGAGGACCTCACCCCTGAAGATCGGGCTGCAGAGCTGCTCCC
GATTGCCGTGCAGCAGTTGTACGTCTTGCTTCGCCAAGGGAAGTCGGAGG
AAGCACAGTCTGTTCTGGAGGAAATTTCCGTTAGCGAGTATGGTTGTCAC
AAAACCTGGTTGACCTTGAACGTCTGAAGCTCACAAAATTTGATAGTATC
CCTGAGCTCTCGACGAAGAAGATCGCGCAGACCAACATCACGCTTGCCCG
TGGCACGACCACTACCAATCCCTTCGCTCTATACAAGGCTCTTCACGAGA
TCCCCGATTCCACCGACAGCGACAAGCTCTTCGAATACCAGGATAACCTC
GCGACGGGGAACTCATATGCGGCAGACCTCCTCGTTCAGAAATACGATGG
CATTATCCGCTCCACCTCCAAGGCGCTCGCTCAAGCTGCCTACCCCTCGA
CGGAACCTCGTGCCAATCTGCTATCAGTCTACAACGCTGCCGCTCACGCA
CGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGATACTATCTGCGCTCGA
CAAACGGCCCAAGGACCTTGGCCTCGCCCTCACAGCCGTCCAGCTCTACG
TGGGTGCGGGCAACACGACGTCCGCGATCACAACTCTAGAGCGGACCCTG
CAACTGCTTGACGAGTCCATCTCCGAGCAAGACAAAGCAGTCCGCTTCAA
TCCCGGCCTCTTGAGCATCCTCGTATCCCTCTACAAGTTGGAGGGCCGTA
AAGTCCAAATCCGGACCGAACTCGCCAAAGCCGCAACATACTGGCAGGCT
CAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCGCCGCAGGAGCATCCCT
CCTGCATTCCTCCGATCGCTCCGACCTAGCCAAAGCGGGCGACCTTTTCA
AGTCCCTCTACCAGAAAGACACGACCGACCAGTTCGCCGTAGCCGGCTAC
GTCGCCTCCCAGGCAACGCTCGACTACTCCAAGGTAGAAGCACAGGTCGA
CACTCTCCCCTCCGTCGCCGACCTGATCTCAGGCGTCAACATCGCCTCCC
TCGAAAATGCCGGCATCTCTCCCTCCTCCGCGGCTAACGCCGCCGCCGCC
GCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCAAGGATAAGGAAGATCG
CGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCCAAGGATTACGACCCCA
GCAAGACCCCCGACCCAGAGCGCTGGCTGCCTCTTCGCGATCGGTCTTCG
TACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCGCTGCGGAGCGGACACA
GGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCCCCGGCTCCTCCCACTC
AGAAGGCTCAAGGAGGAGGTGGTGGTGGCAGCTCGAAGAAGAATAAGAAG
AAGGGCAAGCGGTAA back to topCoding sequence (CDS) from alignment at ch6:3417748..3419912- >KJC3_008906-T1 ID=KJC3_008906-T1|Name=KJC3_008906-T1|organism=Aspergillus niger KJC3|type=CDS|length=7836bp|location=Sequence derived from alignment at ch6:3417748..3419912- (Aspergillus niger KJC3)
TATCCCTGAGCTCTCGACGAAGAAGATCGCGCAGACCAACATCACGCTTG
CCCGTGGCACGACCACTACCAATCCCTTCGCTCTATACAAGGCTCTTCAC
GAGATCCCCGATTCCACCGACAGCGACAAGCTCTTCGAATACCAGGATAA
CCTCGCGACGGGGAACTCATATGCGGCAGACCTCCTCGTTCAGAAATACG
ATGGCATTATCCGCTCCACCTCCAAGGCGCTCGCTCAAGCTGCCTACCCC
TCGACGGAACCTCGTGCCAATCTGCTATCAGTCTACAACGCTGCCGCTCA
CGCACGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGATACTATCTGCGC
TCGACAAACGGCCCAAGGACCTTGGCCTCGCCCTCACAGCCGTCCAGCTC
TACGTGGGTGCGGGCAACACGACGTCCGCGATCACAACTCTAGAGCGGAC
CCTGCAACTGCTTGACGAGTCCATCTCCGAGCAAGACAAAGCAGTCCGCT
TCAATCCCGGCCTCTTGAGCATCCTCGTATCCCTCTACAAGTTGGAGGGC
CGTAAAGTCCAAATCCGGACCGAACTCGCCAAAGCCGCAACATACTGGCA
GGCTCAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCGCCGCAGGAGCAT
CCCTCCTGCATTCCTCCGATCGCTCCGACCTAGCCAAAGCGGGCGACCTT
TTCAAGTCCCTCTACCAGAAAGACACGACCGACCAGTTCGCCGTAGCCGG
CTACGTCGCCTCCCAGGCAACGCTCGACTACTCCAAGGTAGAAGCACAGG
TCGACACTCTCCCCTCCGTCGCCGACCTGATCTCAGGCGTCAACATCGCC
TCCCTCGAAAATGCCGGCATCTCTCCCTCCTCCGCGGCTAACGCCGCCGC
CGCCGCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCAAGGATAAGGAAG
ATCGCGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCCAAGGATTACGAC
CCCAGCAAGACCCCCGACCCAGAGCGCTGGCTGCCTCTTCGCGATCGGTC
TTCGTACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCGCTGCGGAGCGGA
CACAGGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCCCCGGCTCCTCCC
ACTCAGAAGGCTCAAGGAGGAGGTGGTGGTGGCAGCTCGAAGAAGAATAA
GAAGAAGGGCAAGCGGTAAAGCTCTGTCGGACGTCGGAGGACCTCACCCC
TGAAGATCGGGCTGCAGAGCTGCTCCCGATTGCCGTGCAGCAGTTGTACG
TCTTGCTTCGCCAAGGGAAGTCGGAGGAAGCACAGTCTGTTCTGGAGGAA
ATTTCCGTTAGCGAAGCTACCGTTCAGAGAAATTCCGTCGCGCTGCCGAG
ATTTACGAAGAATTGTCCAAAGGCGATGCGTCCCTGTCGAACGAAGAGAA
CGACTTGCGCATCAACTCATGGGCCACGGATGCACAGCTGCAGTGGAAGG
GCTACCCCCAGTTTGTACGCCATAACAGGCCGATGCGGGATGATCTAGAG
GCGTTCGAGACTGTCTATAACGCAGCTTGCTTGAGTATCGCCAAGGGCGA
GTTCCAGCAGGGGCAAGTTCTATTGACTCGGGCTAAAGATGGCTGCCCAG
TCGCTGAGCTCGTTGCTGCAACGAGCATCCATTGACGACCACGAGGAAGT
CCTGCAGTCATGCAATGCCGCGTTGGCCAAGTCGAAGTCGGACTTGCATG
CTCAGCATATCAAGGCAGTTGCTCTGCTGAAGCTTGACCGCTATGAGGAC
TGCCTGCGAGTATTCGAAGAAGCCGGTGATGGTCTGAAGAAGAGAGCAGC
TCTGGAATACGCCTACGCTCTATATAAATGCGGTCAGCTGGACCCGGCGA
TTGAGGTGGTATCTCGCGTCGCTGGTGAGAGGGGCGCACTACATTTGGAG
GCTCAAGCCTATCCCTGAGCTCTCGACGAAGAAGATCGCGCAGACCAACA
TCACGCTTGCCCGTGGCACGACCACTACCAATCCCTTCGCTCTATACAAG
GCTCTTCACGAGATCCCCGATTCCACCGACAGCGACAAGCTCTTCGAATA
CCAGGATAACCTCGCGACGGGGAACTCATATGCGGCAGACCTCCTCGTTC
AGAAATACGATGGCATTATCCGCTCCACCTCCAAGGCGCTCGCTCAAGCT
GCCTACCCCTCGACGGAACCTCGTGCCAATCTGCTATCAGTCTACAACGC
TGCCGCTCACGCACGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGATAC
TATCTGCGCTCGACAAACGGCCCAAGGACCTTGGCCTCGCCCTCACAGCC
GTCCAGCTCTACGTGGGTGCGGGCAACACGACGTCCGCGATCACAACTCT
AGAGCGGACCCTGCAACTGCTTGACGAGTCCATCTCCGAGCAAGACAAAG
CAGTCCGCTTCAATCCCGGCCTCTTGAGCATCCTCGTATCCCTCTACAAG
TTGGAGGGCCGTAAAGTCCAAATCCGGACCGAACTCGCCAAAGCCGCAAC
ATACTGGCAGGCTCAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCGCCG
CAGGAGCATCCCTCCTGCATTCCTCCGATCGCTCCGACCTAGCCAAAGCG
GGCGACCTTTTCAAGTCCCTCTACCAGAAAGACACGACCGACCAGTTCGC
CGTAGCCGGCTACGTCGCCTCCCAGGCAACGCTCGACTACTCCAAGGTAG
AAGCACAGGTCGACACTCTCCCCTCCGTCGCCGACCTGATCTCAGGCGTC
AACATCGCCTCCCTCGAAAATGCCGGCATCTCTCCCTCCTCCGCGGCTAA
CGCCGCCGCCGCCGCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCAAGG
ATAAGGAAGATCGCGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCCAAG
GATTACGACCCCAGCAAGACCCCCGACCCAGAGCGCTGGCTGCCTCTTCG
CGATCGGTCTTCGTACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCGCTG
CGGAGCGGACACAGGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCCCCG
GCTCCTCCCACTCAGAAGGCTCAAGGAGGAGGTGGTGGTGGCAGCTCGAA
GAAGAATAAGAAGAAGGGCAAGCGGTAAAGCTCTGTCGGACGTCGGAGGA
CCTCACCCCTGAAGATCGGGCTGCAGAGCTGCTCCCGATTGCCGTGCAGC
AGTTGTACGTCTTGCTTCGCCAAGGGAAGTCGGAGGAAGCACAGTCTGTT
CTGGAGGAAATTTCCGTTAGCGAAGCTACCGTTCAGAGAAATTCCGTCGC
GCTGCCGAGATTTACGAAGAATTGTCCAAAGGCGATGCGTCCCTGTCGAA
CGAAGAGAACGACTTGCGCATCAACTCATGGGCCACGGATGCACAGCTGC
AGTGGAAGGGCTACCCCCAGTTTGTACGCCATAACAGGCCGATGCGGGAT
GATCTAGAGGCGTTCGAGACTGTCTATAACGCAGCTTGCTTGAGTATCGC
CAAGGGCGAGTTCCAGCAGGGGCAAGTTCTATTGACTCGGGCTAAAGATG
GCTGCCCAGTCGCTGAGCTCGTTGCTGCAACGAGCATCCATTGACGACCA
CGAGGAAGTCCTGCAGTCATGCAATGCCGCGTTGGCCAAGTCGAAGTCGG
ACTTGCATGCTCAGCATATCAAGGCAGTTGCTCTGCTGAAGCTTGACCGC
TATGAGGACTGCCTGCGAGTATTCGAAGAAGCCGGTGATGGTCTGAAGAA
GAGAGCAGCTCTGGAATACGCCTACGCTCTATATAAATGCGGTCAGCTGG
ACCCGGCGATTGAGGTGGTATCTCGCGTCGCTGGTGAGAGGGGCGCACTA
CATTTGGAGGCTCAAGCCTATCCCTGAGCTCTCGACGAAGAAGATCGCGC
AGACCAACATCACGCTTGCCCGTGGCACGACCACTACCAATCCCTTCGCT
CTATACAAGGCTCTTCACGAGATCCCCGATTCCACCGACAGCGACAAGCT
CTTCGAATACCAGGATAACCTCGCGACGGGGAACTCATATGCGGCAGACC
TCCTCGTTCAGAAATACGATGGCATTATCCGCTCCACCTCCAAGGCGCTC
GCTCAAGCTGCCTACCCCTCGACGGAACCTCGTGCCAATCTGCTATCAGT
CTACAACGCTGCCGCTCACGCACGCGGAGAAACAGGCACCAAGGCCTTGA
AGCGGATACTATCTGCGCTCGACAAACGGCCCAAGGACCTTGGCCTCGCC
CTCACAGCCGTCCAGCTCTACGTGGGTGCGGGCAACACGACGTCCGCGAT
CACAACTCTAGAGCGGACCCTGCAACTGCTTGACGAGTCCATCTCCGAGC
AAGACAAAGCAGTCCGCTTCAATCCCGGCCTCTTGAGCATCCTCGTATCC
CTCTACAAGTTGGAGGGCCGTAAAGTCCAAATCCGGACCGAACTCGCCAA
AGCCGCAACATACTGGCAGGCTCAAGCCGCCGAACCACCAGCCTCCCTGC
TCCGCGCCGCAGGAGCATCCCTCCTGCATTCCTCCGATCGCTCCGACCTA
GCCAAAGCGGGCGACCTTTTCAAGTCCCTCTACCAGAAAGACACGACCGA
CCAGTTCGCCGTAGCCGGCTACGTCGCCTCCCAGGCAACGCTCGACTACT
CCAAGGTAGAAGCACAGGTCGACACTCTCCCCTCCGTCGCCGACCTGATC
TCAGGCGTCAACATCGCCTCCCTCGAAAATGCCGGCATCTCTCCCTCCTC
CGCGGCTAACGCCGCCGCCGCCGCAGCCATGGCCGGCGCGCGGAAGAGAA
GCGCCAAGGATAAGGAAGATCGCGCAACCAAGCGTGTTCGCAAGGACCGT
CTGCCCAAGGATTACGACCCCAGCAAGACCCCCGACCCAGAGCGCTGGCT
GCCTCTTCGCGATCGGTCTTCGTACCGCCCCAAGGGCCGCAAGGGTAAGC
AGCGCGCTGCGGAGCGGACACAGGGTGGTGTGGTGAACGAGAAGGCTGAA
GAGTCCCCGGCTCCTCCCACTCAGAAGGCTCAAGGAGGAGGTGGTGGTGG
CAGCTCGAAGAAGAATAAGAAGAAGGGCAAGCGGTAAAGCTCTGTCGGAC
GTCGGAGGACCTCACCCCTGAAGATCGGGCTGCAGAGCTGCTCCCGATTG
CCGTGCAGCAGTTGTACGTCTTGCTTCGCCAAGGGAAGTCGGAGGAAGCA
CAGTCTGTTCTGGAGGAAATTTCCGTTAGCGAAGCTACCGTTCAGAGAAA
TTCCGTCGCGCTGCCGAGATTTACGAAGAATTGTCCAAAGGCGATGCGTC
CCTGTCGAACGAAGAGAACGACTTGCGCATCAACTCATGGGCCACGGATG
CACAGCTGCAGTGGAAGGGCTACCCCCAGTTTGTACGCCATAACAGGCCG
ATGCGGGATGATCTAGAGGCGTTCGAGACTGTCTATAACGCAGCTTGCTT
GAGTATCGCCAAGGGCGAGTTCCAGCAGGGGCAAGTTCTATTGACTCGGG
CTAAAGATGGCTGCCCAGTCGCTGAGCTCGTTGCTGCAACGAGCATCCAT
TGACGACCACGAGGAAGTCCTGCAGTCATGCAATGCCGCGTTGGCCAAGT
CGAAGTCGGACTTGCATGCTCAGCATATCAAGGCAGTTGCTCTGCTGAAG
CTTGACCGCTATGAGGACTGCCTGCGAGTATTCGAAGAAGCCGGTGATGG
TCTGAAGAAGAGAGCAGCTCTGGAATACGCCTACGCTCTATATAAATGCG
GTCAGCTGGACCCGGCGATTGAGGTGGTATCTCGCGTCGCTGGTGAGAGG
GGCGCACTACATTTGGAGGCTCAAGCCTATCCCTGAGCTCTCGACGAAGA
AGATCGCGCAGACCAACATCACGCTTGCCCGTGGCACGACCACTACCAAT
CCCTTCGCTCTATACAAGGCTCTTCACGAGATCCCCGATTCCACCGACAG
CGACAAGCTCTTCGAATACCAGGATAACCTCGCGACGGGGAACTCATATG
CGGCAGACCTCCTCGTTCAGAAATACGATGGCATTATCCGCTCCACCTCC
AAGGCGCTCGCTCAAGCTGCCTACCCCTCGACGGAACCTCGTGCCAATCT
GCTATCAGTCTACAACGCTGCCGCTCACGCACGCGGAGAAACAGGCACCA
AGGCCTTGAAGCGGATACTATCTGCGCTCGACAAACGGCCCAAGGACCTT
GGCCTCGCCCTCACAGCCGTCCAGCTCTACGTGGGTGCGGGCAACACGAC
GTCCGCGATCACAACTCTAGAGCGGACCCTGCAACTGCTTGACGAGTCCA
TCTCCGAGCAAGACAAAGCAGTCCGCTTCAATCCCGGCCTCTTGAGCATC
CTCGTATCCCTCTACAAGTTGGAGGGCCGTAAAGTCCAAATCCGGACCGA
ACTCGCCAAAGCCGCAACATACTGGCAGGCTCAAGCCGCCGAACCACCAG
CCTCCCTGCTCCGCGCCGCAGGAGCATCCCTCCTGCATTCCTCCGATCGC
TCCGACCTAGCCAAAGCGGGCGACCTTTTCAAGTCCCTCTACCAGAAAGA
CACGACCGACCAGTTCGCCGTAGCCGGCTACGTCGCCTCCCAGGCAACGC
TCGACTACTCCAAGGTAGAAGCACAGGTCGACACTCTCCCCTCCGTCGCC
GACCTGATCTCAGGCGTCAACATCGCCTCCCTCGAAAATGCCGGCATCTC
TCCCTCCTCCGCGGCTAACGCCGCCGCCGCCGCAGCCATGGCCGGCGCGC
GGAAGAGAAGCGCCAAGGATAAGGAAGATCGCGCAACCAAGCGTGTTCGC
AAGGACCGTCTGCCCAAGGATTACGACCCCAGCAAGACCCCCGACCCAGA
GCGCTGGCTGCCTCTTCGCGATCGGTCTTCGTACCGCCCCAAGGGCCGCA
AGGGTAAGCAGCGCGCTGCGGAGCGGACACAGGGTGGTGTGGTGAACGAG
AAGGCTGAAGAGTCCCCGGCTCCTCCCACTCAGAAGGCTCAAGGAGGAGG
TGGTGGTGGCAGCTCGAAGAAGAATAAGAAGAAGGGCAAGCGGTAAAGCT
CTGTCGGACGTCGGAGGACCTCACCCCTGAAGATCGGGCTGCAGAGCTGC
TCCCGATTGCCGTGCAGCAGTTGTACGTCTTGCTTCGCCAAGGGAAGTCG
GAGGAAGCACAGTCTGTTCTGGAGGAAATTTCCGTTAGCGAAGCTACCGT
TCAGAGAAATTCCGTCGCGCTGCCGAGATTTACGAAGAATTGTCCAAAGG
CGATGCGTCCCTGTCGAACGAAGAGAACGACTTGCGCATCAACTCATGGG
CCACGGATGCACAGCTGCAGTGGAAGGGCTACCCCCAGTTTGTACGCCAT
AACAGGCCGATGCGGGATGATCTAGAGGCGTTCGAGACTGTCTATAACGC
AGCTTGCTTGAGTATCGCCAAGGGCGAGTTCCAGCAGGGGCAAGTTCTAT
TGACTCGGGCTAAAGATGGCTGCCCAGTCGCTGAGCTCGTTGCTGCAACG
AGCATCCATTGACGACCACGAGGAAGTCCTGCAGTCATGCAATGCCGCGT
TGGCCAAGTCGAAGTCGGACTTGCATGCTCAGCATATCAAGGCAGTTGCT
CTGCTGAAGCTTGACCGCTATGAGGACTGCCTGCGAGTATTCGAAGAAGC
CGGTGATGGTCTGAAGAAGAGAGCAGCTCTGGAATACGCCTACGCTCTAT
ATAAATGCGGTCAGCTGGACCCGGCGATTGAGGTGGTATCTCGCGTCGCT
GGTGAGAGGGGCGCACTACATTTGGAGGCTCAAGCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0048500 | signal recognition particle |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008312 | 7S RNA binding |
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013699 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR031545 |
| DBxref | InterPro:IPR026270 |
| DBxref | PFAM:PF17004 |
| DBxref | PFAM:PF08492 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3417748..3419912 - |
|
