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KJC3_008908-T1, KJC3_008908-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008908-T1
Unique NameKJC3_008908-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3424073..3426704-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008908-T1 ID=KJC3_008908-T1|Name=KJC3_008908-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2632bp|location=Sequence derived from alignment at ch6:3424073..3426704- (Aspergillus niger KJC3)
CTCGCACTTGAAGGACATGGCTTCGGCCTCCTGTCTGGAGTATACCTGAC
CCGCGTCATGGCTCGGGCGGAGGGTCCACCTGCTAAACCAGGAAGCCATC
CTGGGACTAAAAGACTAGTAGCTCCAGTCGAGGTGATACCCCCTTTGGCT
CGAGCAACGGGCCGAAATGAACAGGCCAGTCGTAGCAGGTTAATGGAGGT
GGCTCATACCGCGGGGTCCGGGTAGCCTGGAGGTGCCGACTTTCTCACGG
TGTCGCTTCCCCGCCGCCCTTCCCCAGATTTCTCTCCTTTGGTCTCCCCT
CCTTTAGCAATCGCATGATTTTCGGTGACTGCTCACCTTGTGGCCATCTT
GACCACCGAAACTTGTCTCACGAGTATCGTTATTTCTCAAAATACAATGA
AGTCTCCAGAGTCTCGCTCCACTGCCGCTGCTACTGCTAAGTTCTGACGG
GAGTCACACTTGTCTCCGCATACAAATGGACTCTCATCCTTCCCCTACCA
AACAAAAGGCCTCCAAGCAAGCCTGCGACAACTGTCGTCGGCGTAAGATC
AAGTGCTCGAGAGAGCTTCCCTGCGATAAGTGTCGACGCCTTCTTCTTTC
TTGTTCCTACAGTGATGTGCTCCGGCGCAAAGGCCCCAAGTTCCGCACCT
TATATCCACTTGCGCCCATTCATCCCCTGGTATCACGACAACAGAATACA
TACCAACAGAATTCGTCACAAAATCCGTTAAACAAGCAATGGACTGCAGA
TGGAGTGGGCTATCCGTTAAGCTCACTAATGTCGCCTTCTTTCACAGTGG
CAGACCCTCAATACTTACCCCATGACGCTCCCGAGCCGTTCTCTCAGTTT
CCTCCGCCAGAGCTAGTCTCCTCACCCGACTCAACCAATTCATTGTCAGA
CTCTAGTATGGCACTAGTGCGCCCTTATGCACGACGCCTGTCTGCTCCGG
TGCTACTTGCTCATGTGAATGTTTATCTAAAATATCTGTTCCCCATCATG
CCTGTGGTGCGGAAGGAGGAGCTTCAACAAGATTGCCACCAGCCTGAACG
GTTATCGCCCCAACGATATGCCTTTCTTGTCGCCCTATGCGCAGCCACAC
ACATCCAGCTGAAACTAGATGGCACAGCATCTGTCCCAGAACCTTCACAC
CTTCAAGCCGGGATTGACGGGCATTCCTGGATGTCCGGCGAAGAGTTGCT
GGCTGAAGCAGTACGCGCAAGGAAGGATTGCGACCCAGTAGACGGCATGA
ACATAGAAAGCCTTCTTACGTCTTTCTTCCTGTTTGCTTCGTATGGTAAC
CTGGACAAACAGGACCATGCCTGGTTCTACCTTTGTCAGGCAACATCCAT
GGTCTTCACGCTGGCACTCCACCGAGAGTCAAGTTATGTGGATCTGAGTA
CCGAAGAAGCAGAGGAACGACGCAGGGTGTTTTGGCTACTGTTTGTCACC
GAAAGGTAGGTGCATCCTATGAAAGCATTGCCCATTTTTCGACTAATGTG
AATCAGGGGCTACGCACTTCAACAATCGAAACCGGTAATGCTGCGTAATT
CAATCCGCAAGCCTCAAGTACTTTGCTCCGAAGATCCTATCTTGGCCTAC
GGTTTCATCAATCTTATTAGCATCTTTGAGAAACTGACCGTCAACCTTTA
TGACTGGGTCTCTGCGGGAGGCATGGACGGCTCGTCCGAGATGCCCCCTA
CATCTGCTATTCAGTCTAGTCTCTGCAACGCAATTTCGGTCGACGGAGTC
TCGGAGATTCAAAAGGTCGACATACTCATCACCCAGCAATGGCTACAGAC
AGTAATGTGGAAACTTTCTATGACTCGTGCTACTCAGCCTGGATCTCGCG
ATGAGGCGGTTCTTCCCTTTCATCTCCCCGTTCTTGTCGGAAAAGCCGTT
ATGAATGTTATTGGTGCTGCATCCCAGGGAGCTGTTGATGCTCACGGCAT
TGGCATGGTCAGTATCTTAGTTCCGGCGCAGCACATGCCAATACCATTTA
CTAACAACATAACAGGAACAAAAATTATTCGACCTGGGTTCCTCAGTTGC
AGACGTGGCACGATCACTCAACTCCAAAGCTGCGCACCGCCTTACTGAAG
CGGCCGTCGATCCTCGCGAACTCCTTTGGGGCATTCTTACCACCTTATCA
CGCATCCGCGGCTCTCAGTCCTACCTCTTTCCTTCATTGTTGGAGCGATG
CAAAGGCGCCCTGGACTTTACCTCCCCCACGTCGATGGGCAACTTCCTCC
CTCCATTATCCACTGCTTCCACATGGGAAGAGGAAACGGGGCTCGCCGTG
GTTTCTGTCCCGGAGAATCCTGACCCTCATGAACAAGAGGCAGCATTAAT
GGAGCCGCTATCGCAGCTCTTACCAACTCCACAGGTGCAATTCCCGGAAA
ATAATCTTTTGAACTAGGAAGGCAACTACGACGATGACGATGCTAGCATT
AATCCGCGTTTGTTACGACTTTGCTTATGTTATGATACCATTTATCCGGA
GACTATGTGGCAATGTATACGGCATGAAGGTGAACTGTATGTAATAAAGC
ATGTATATAGGTGATGAGACTATCTTATATGATTACCGATCGTGGTCGAA
TATTAGCTGAGCCACCATGCATTGCATTGGAC
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Coding sequence (CDS) from alignment at ch6:3424073..3426704-

>KJC3_008908-T1 ID=KJC3_008908-T1|Name=KJC3_008908-T1|organism=Aspergillus niger KJC3|type=CDS|length=5499bp|location=Sequence derived from alignment at ch6:3424073..3426704- (Aspergillus niger KJC3)
GAACAAAAATTATTCGACCTGGGTTCCTCAGTTGCAGACGTGGCACGATC
ACTCAACTCCAAAGCTGCGCACCGCCTTACTGAAGCGGCCGTCGATCCTC
GCGAACTCCTTTGGGGCATTCTTACCACCTTATCACGCATCCGCGGCTCT
CAGTCCTACCTCTTTCCTTCATTGTTGGAGCGATGCAAAGGCGCCCTGGA
CTTTACCTCCCCCACGTCGATGGGCAACTTCCTCCCTCCATTATCCACTG
CTTCCACATGGGAAGAGGAAACGGGGCTCGCCGTGGTTTCTGTCCCGGAG
AATCCTGACCCTCATGAACAAGAGGCAGCATTAATGGAGCCGCTATCGCA
GCTCTTACCAACTCCACAGGTGCAATTCCCGGAAAATAATCTTTTGAACT
AGGGGCTACGCACTTCAACAATCGAAACCGGTAATGCTGCGTAATTCAAT
CCGCAAGCCTCAAGTACTTTGCTCCGAAGATCCTATCTTGGCCTACGGTT
TCATCAATCTTATTAGCATCTTTGAGAAACTGACCGTCAACCTTTATGAC
TGGGTCTCTGCGGGAGGCATGGACGGCTCGTCCGAGATGCCCCCTACATC
TGCTATTCAGTCTAGTCTCTGCAACGCAATTTCGGTCGACGGAGTCTCGG
AGATTCAAAAGGTCGACATACTCATCACCCAGCAATGGCTACAGACAGTA
ATGTGGAAACTTTCTATGACTCGTGCTACTCAGCCTGGATCTCGCGATGA
GGCGGTTCTTCCCTTTCATCTCCCCGTTCTTGTCGGAAAAGCCGTTATGA
ATGTTATTGGTGCTGCATCCCAGGGAGCTGTTGATGCTCACGGCATTGGC
ATGATGGACTCTCATCCTTCCCCTACCAAACAAAAGGCCTCCAAGCAAGC
CTGCGACAACTGTCGTCGGCGTAAGATCAAGTGCTCGAGAGAGCTTCCCT
GCGATAAGTGTCGACGCCTTCTTCTTTCTTGTTCCTACAGTGATGTGCTC
CGGCGCAAAGGCCCCAAGTTCCGCACCTTATATCCACTTGCGCCCATTCA
TCCCCTGGTATCACGACAACAGAATACATACCAACAGAATTCGTCACAAA
ATCCGTTAAACAAGCAATGGACTGCAGATGGAGTGGGCTATCCGTTAAGC
TCACTAATGTCGCCTTCTTTCACAGTGGCAGACCCTCAATACTTACCCCA
TGACGCTCCCGAGCCGTTCTCTCAGTTTCCTCCGCCAGAGCTAGTCTCCT
CACCCGACTCAACCAATTCATTGTCAGACTCTAGTATGGCACTAGTGCGC
CCTTATGCACGACGCCTGTCTGCTCCGGTGCTACTTGCTCATGTGAATGT
TTATCTAAAATATCTGTTCCCCATCATGCCTGTGGTGCGGAAGGAGGAGC
TTCAACAAGATTGCCACCAGCCTGAACGGTTATCGCCCCAACGATATGCC
TTTCTTGTCGCCCTATGCGCAGCCACACACATCCAGCTGAAACTAGATGG
CACAGCATCTGTCCCAGAACCTTCACACCTTCAAGCCGGGATTGACGGGC
ATTCCTGGATGTCCGGCGAAGAGTTGCTGGCTGAAGCAGTACGCGCAAGG
AAGGATTGCGACCCAGTAGACGGCATGAACATAGAAAGCCTTCTTACGTC
TTTCTTCCTGTTTGCTTCGTATGGTAACCTGGACAAACAGGACCATGCCT
GGTTCTACCTTTGTCAGGCAACATCCATGGTCTTCACGCTGGCACTCCAC
CGAGAGTCAAGTTATGTGGATCTGAGTACCGAAGAAGCAGAGGAACGACG
CAGGGTGTTTTGGCTACTGTTTGTCACCGAAAGGAACAAAAATTATTCGA
CCTGGGTTCCTCAGTTGCAGACGTGGCACGATCACTCAACTCCAAAGCTG
CGCACCGCCTTACTGAAGCGGCCGTCGATCCTCGCGAACTCCTTTGGGGC
ATTCTTACCACCTTATCACGCATCCGCGGCTCTCAGTCCTACCTCTTTCC
TTCATTGTTGGAGCGATGCAAAGGCGCCCTGGACTTTACCTCCCCCACGT
CGATGGGCAACTTCCTCCCTCCATTATCCACTGCTTCCACATGGGAAGAG
GAAACGGGGCTCGCCGTGGTTTCTGTCCCGGAGAATCCTGACCCTCATGA
ACAAGAGGCAGCATTAATGGAGCCGCTATCGCAGCTCTTACCAACTCCAC
AGGTGCAATTCCCGGAAAATAATCTTTTGAACTAGGGGCTACGCACTTCA
ACAATCGAAACCGGTAATGCTGCGTAATTCAATCCGCAAGCCTCAAGTAC
TTTGCTCCGAAGATCCTATCTTGGCCTACGGTTTCATCAATCTTATTAGC
ATCTTTGAGAAACTGACCGTCAACCTTTATGACTGGGTCTCTGCGGGAGG
CATGGACGGCTCGTCCGAGATGCCCCCTACATCTGCTATTCAGTCTAGTC
TCTGCAACGCAATTTCGGTCGACGGAGTCTCGGAGATTCAAAAGGTCGAC
ATACTCATCACCCAGCAATGGCTACAGACAGTAATGTGGAAACTTTCTAT
GACTCGTGCTACTCAGCCTGGATCTCGCGATGAGGCGGTTCTTCCCTTTC
ATCTCCCCGTTCTTGTCGGAAAAGCCGTTATGAATGTTATTGGTGCTGCA
TCCCAGGGAGCTGTTGATGCTCACGGCATTGGCATGATGGACTCTCATCC
TTCCCCTACCAAACAAAAGGCCTCCAAGCAAGCCTGCGACAACTGTCGTC
GGCGTAAGATCAAGTGCTCGAGAGAGCTTCCCTGCGATAAGTGTCGACGC
CTTCTTCTTTCTTGTTCCTACAGTGATGTGCTCCGGCGCAAAGGCCCCAA
GTTCCGCACCTTATATCCACTTGCGCCCATTCATCCCCTGGTATCACGAC
AACAGAATACATACCAACAGAATTCGTCACAAAATCCGTTAAACAAGCAA
TGGACTGCAGATGGAGTGGGCTATCCGTTAAGCTCACTAATGTCGCCTTC
TTTCACAGTGGCAGACCCTCAATACTTACCCCATGACGCTCCCGAGCCGT
TCTCTCAGTTTCCTCCGCCAGAGCTAGTCTCCTCACCCGACTCAACCAAT
TCATTGTCAGACTCTAGTATGGCACTAGTGCGCCCTTATGCACGACGCCT
GTCTGCTCCGGTGCTACTTGCTCATGTGAATGTTTATCTAAAATATCTGT
TCCCCATCATGCCTGTGGTGCGGAAGGAGGAGCTTCAACAAGATTGCCAC
CAGCCTGAACGGTTATCGCCCCAACGATATGCCTTTCTTGTCGCCCTATG
CGCAGCCACACACATCCAGCTGAAACTAGATGGCACAGCATCTGTCCCAG
AACCTTCACACCTTCAAGCCGGGATTGACGGGCATTCCTGGATGTCCGGC
GAAGAGTTGCTGGCTGAAGCAGTACGCGCAAGGAAGGATTGCGACCCAGT
AGACGGCATGAACATAGAAAGCCTTCTTACGTCTTTCTTCCTGTTTGCTT
CGTATGGTAACCTGGACAAACAGGACCATGCCTGGTTCTACCTTTGTCAG
GCAACATCCATGGTCTTCACGCTGGCACTCCACCGAGAGTCAAGTTATGT
GGATCTGAGTACCGAAGAAGCAGAGGAACGACGCAGGGTGTTTTGGCTAC
TGTTTGTCACCGAAAGGAACAAAAATTATTCGACCTGGGTTCCTCAGTTG
CAGACGTGGCACGATCACTCAACTCCAAAGCTGCGCACCGCCTTACTGAA
GCGGCCGTCGATCCTCGCGAACTCCTTTGGGGCATTCTTACCACCTTATC
ACGCATCCGCGGCTCTCAGTCCTACCTCTTTCCTTCATTGTTGGAGCGAT
GCAAAGGCGCCCTGGACTTTACCTCCCCCACGTCGATGGGCAACTTCCTC
CCTCCATTATCCACTGCTTCCACATGGGAAGAGGAAACGGGGCTCGCCGT
GGTTTCTGTCCCGGAGAATCCTGACCCTCATGAACAAGAGGCAGCATTAA
TGGAGCCGCTATCGCAGCTCTTACCAACTCCACAGGTGCAATTCCCGGAA
AATAATCTTTTGAACTAGGGGCTACGCACTTCAACAATCGAAACCGGTAA
TGCTGCGTAATTCAATCCGCAAGCCTCAAGTACTTTGCTCCGAAGATCCT
ATCTTGGCCTACGGTTTCATCAATCTTATTAGCATCTTTGAGAAACTGAC
CGTCAACCTTTATGACTGGGTCTCTGCGGGAGGCATGGACGGCTCGTCCG
AGATGCCCCCTACATCTGCTATTCAGTCTAGTCTCTGCAACGCAATTTCG
GTCGACGGAGTCTCGGAGATTCAAAAGGTCGACATACTCATCACCCAGCA
ATGGCTACAGACAGTAATGTGGAAACTTTCTATGACTCGTGCTACTCAGC
CTGGATCTCGCGATGAGGCGGTTCTTCCCTTTCATCTCCCCGTTCTTGTC
GGAAAAGCCGTTATGAATGTTATTGGTGCTGCATCCCAGGGAGCTGTTGA
TGCTCACGGCATTGGCATGATGGACTCTCATCCTTCCCCTACCAAACAAA
AGGCCTCCAAGCAAGCCTGCGACAACTGTCGTCGGCGTAAGATCAAGTGC
TCGAGAGAGCTTCCCTGCGATAAGTGTCGACGCCTTCTTCTTTCTTGTTC
CTACAGTGATGTGCTCCGGCGCAAAGGCCCCAAGTTCCGCACCTTATATC
CACTTGCGCCCATTCATCCCCTGGTATCACGACAACAGAATACATACCAA
CAGAATTCGTCACAAAATCCGTTAAACAAGCAATGGACTGCAGATGGAGT
GGGCTATCCGTTAAGCTCACTAATGTCGCCTTCTTTCACAGTGGCAGACC
CTCAATACTTACCCCATGACGCTCCCGAGCCGTTCTCTCAGTTTCCTCCG
CCAGAGCTAGTCTCCTCACCCGACTCAACCAATTCATTGTCAGACTCTAG
TATGGCACTAGTGCGCCCTTATGCACGACGCCTGTCTGCTCCGGTGCTAC
TTGCTCATGTGAATGTTTATCTAAAATATCTGTTCCCCATCATGCCTGTG
GTGCGGAAGGAGGAGCTTCAACAAGATTGCCACCAGCCTGAACGGTTATC
GCCCCAACGATATGCCTTTCTTGTCGCCCTATGCGCAGCCACACACATCC
AGCTGAAACTAGATGGCACAGCATCTGTCCCAGAACCTTCACACCTTCAA
GCCGGGATTGACGGGCATTCCTGGATGTCCGGCGAAGAGTTGCTGGCTGA
AGCAGTACGCGCAAGGAAGGATTGCGACCCAGTAGACGGCATGAACATAG
AAAGCCTTCTTACGTCTTTCTTCCTGTTTGCTTCGTATGGTAACCTGGAC
AAACAGGACCATGCCTGGTTCTACCTTTGTCAGGCAACATCCATGGTCTT
CACGCTGGCACTCCACCGAGAGTCAAGTTATGTGGATCTGAGTACCGAAG
AAGCAGAGGAACGACGCAGGGTGTTTTGGCTACTGTTTGTCACCGAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008908KJC3_008908Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008908-T1KJC3_008908-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008908-T1.cdsKJC3_008908-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008908-T1.utr3p1KJC3_008908-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008908-T1.exon3KJC3_008908-T1.exon3Aspergillus niger KJC3exon
KJC3_008908-T1.exon2KJC3_008908-T1.exon2Aspergillus niger KJC3exon
KJC3_008908-T1.exon1KJC3_008908-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008908-T1.utr5p1KJC3_008908-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3424073..3426704 -
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