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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3460580..3463713- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008913-T1 ID=KJC3_008913-T1|Name=KJC3_008913-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3134bp|location=Sequence derived from alignment at ch6:3460580..3463713- (Aspergillus niger KJC3)
AATGATTGTGTGCGACAAAACAAGTCAGTCTCTTCAAGGCTCTTTTTTTC
TTCTTCTTTCCAGCCCGGCCACTTATCTGATTCTTTTTTCGCACGTGCTT
AACTCCAGTTCATTCCCCCCAGCTATCTTGACTGGAGTTTCAGCTAAATT
CCAGCACACCTGCCCTCATCTAATCTGACTTATCTCTTGCTCTCACGCTC
ACGGTCGGACTACCGGAATCCTCCGTACGCCAAAAGGACGCCAACAGGCG
AAAGGATCCCGACTAAGCTGCGACTAATCGCCCACCATCTGATGTGCATC
GTCGTCTAGTCTATCGGAACCGTTATCCCGGTGCCGTCTGCCCCAGGCGA
ACTGCGTCCCGTCTAATTCGATTCCACCCCCATTTTTCGACCATTCATCA
ACCTCGCCCACTGCTGACCTGTTCTCTCCGATTGCTGCTGGTCTGATTCG
GGTCTCCATCACGGTTGCGGTGTCCACTAGCTGACCCGATCCACTGGCCT
TCGTTTCCAATCCCCTTTTCTGTGGCTCCTCTTTTCTACATTTGACCAGC
CATTATCTTGCGATTGCTTGGTCGTCGACTTTTGTCTGCTTTCCTCCCTT
CATCTTCGCCAATTCCTCTAGGTTGGCGATCTATCACCAATTGTCGTATC
TTGTGCTGTCATAGAACCGCAATGGGTATGGTTAACAGTCTCTCCTTCGC
GCTTGCTGCTCAATTGATGTCCATGACAATTGCTGATCATATCTCTCCGA
GCAGTTCACGCCGTTCTTCCTCCACCGCCGCCGTCGAGGCCTGTGACGTC
GCGGACGTCTCTTGTTCCTCATGTGGAGCATGCGATTGTTCCCCGGTCGT
CTACCTCCCACCCTGACAATCCGGTTCCAGAGGAGCCTCGTGGCGTTCGC
TCGCTCTCGATAACTGATGTGAACTTCAGTGTCTCCACGCCGTCTTCGCC
GGAGACAGACACTACCAGCTCAGAGACAGCGTCGGGGGTCCAGACTCCTG
CCACTGAAATTCAATCCGAAGCTGAAGAATCCACTCGCGATGGCCCCGAA
AAGCAACGACGAGCATCTACCGTGCTCATCTCCCAGAACTCTGATGACAT
GAGACGTATCTTGGAAAATGTGGGATCTAGCGGTACACAGAAGCTTCAGC
CGCTTTGCTGTGGTGGTGGATGCTGCCGCAGCAAGCCCTTGGTGAACTTC
ACACCTCCACTGGCCGGAGTGAAAGCAATCACTCCCCCAGACAACAAGGC
CTATCAATGTTTGAAGCTCAATGTCGATTACCTCACTTTGGACAGCGAGC
TGAGCAACGTCGCTCCTTTGCCCGAGAAGACGGTCTCCTTCTCGTCCGTC
CCAGGCTACGCAGTAGATGTGGAGCTGGGACCCGCAGACCATCCTCCTTC
TTTCGTCCAGCCTCACCCACCATACAATGTCTACCGGGCGCCCTTGTACC
ATGCGCGCGAGCTGACAGGGTCAGGTGCGGAGAAGCGGACGTATCACTTT
GACATTGACGTCACCGACTACCCTGCAGAGAGTGGAAATGTCGACTTCAT
AGTCGGTGGTGCCATTGGGGTGTGTCCTAAGAACAAGGAAGAGGAGGTCG
ATGACATCTTTAACCAGCTTGGTGTTCCTAAGTTTATCCGTGATAAGAAA
ATCGTCGTACGCACTGAGAAGGGCCGCTGGCCCACCATCTGGGGTGATGA
CCAGCCCCGTGAGCTGATCACGACCCGAAGAGAATTGTTGAGCTGGTGCT
CTGATATCCAGAGTTATGCCCCTAACAAGGCTCTGTTCCGCTTACTCGGC
GAGTATGCCAGCGATCCTAGCGAAAAGAAGATCCTCCTGTTCCTTTCCTC
CGCCCAAGGCCAAGGTGCTTTCTGTGACCTGCGCACCAGCTCCCACGTCA
CCGTCTCCCAGCTGCTTCACGCATTCCCTTCCTCTCACCCTCCCTTGGAT
CACCTTCTCTCCGTCCTGAACACCCTCATGCCCCGCTTCTACTCACTATC
CCAAGATCCCCTTCTGTCATGCAAGCAGAAGGGCTCCGTGACTCGTCGTG
TGATCGAAGTTGCGGTAACCGTGGCCGAGTCTGATGATTGGAAGGGAGGC
CTCCGCACTGGTGTGGGATCTGGATATCTCGAGCGCGTTGCACGACGACT
GATTGACGCTGAAAAGAAGGGCATCGACCCGCAGACTCTTGACCTCCACG
TACCTATGTTCCGAGGCCTGATGGCCAACCCTCTAGCCAAGCGCTTCGCA
TCCGATGGCCCTATGCTGCTTATCGGCGCGGGAGTTGGCATTGCTCCGTT
CCGCGGTTTCGTGCAGCGACGCCTGCAGTCTGCCAACTGTGCGAACAAGG
TCTGGGTGCTGCAGGGTGTTCGCGACTCTTTGCTGGACGAGCTCTACCGC
GGCGAGTGGGGTGTCGAAGAAGAAAAGGTGCGAACAGTCGTCCAGAGCCG
TCGCGGCGAGAGCAAGTACGTGCAAGAGGAGGTCCGGAACCAAGCTGATC
TTGTCTGGTACGTGATCAACGCTTTGGACGGGCGTGTCTTTGTCTGCGGT
AGCGGAAAGGGCATGGGAGAGGGCGTTGAAGCCGCCTTGATCGACGTAGC
CATGGCCAAGGGTAACCTCAACATGGAAGAAGCGACATTGTTCTGGGAGA
ACAAGAAGGAAGCTGGACAGTACATTGCAGTAAGTGTGATCTGCCACTCC
ATTGTTGACTATGAAACTAACCCTTGGATTAGGAAACATGGTAAATTCTC
TCGAGAGGTATACCAAAGCTAGCCAAATTGACTTTGGCTTTGCTGCGCTA
TGCTGTACTGTCTTAAGCAGTAACTTTTGCATGGCAAGCTCACAACATCA
CATGCTTTCTTGCATGTGACATCTTTCATTTCCATTCGAATCTGTATGAC
ATTGATCATTTGCCGGGTATCTTGATTTTAATATTGCTTTAGCGGGAATG
GTTTTTGTTTTGTTTTGTTTTGTTTTGTTCTTATATCTTTGTTATTTTTC
ATCTACGGTTGATCCGGGATTACCGTCGAAGAACGGGTTGGGCATGATAG
ATTAGTACTTACCTGGTAGCAATACCTAATATATGGGTTATGTACAAATG
GCAGAAACACGAGTACAAAAGAAGTACTAGGGAG back to topCoding sequence (CDS) from alignment at ch6:3460580..3463713- >KJC3_008913-T1 ID=KJC3_008913-T1|Name=KJC3_008913-T1|organism=Aspergillus niger KJC3|type=CDS|length=5823bp|location=Sequence derived from alignment at ch6:3460580..3463713- (Aspergillus niger KJC3)
GAAACATGGTAATTCACGCCGTTCTTCCTCCACCGCCGCCGTCGAGGCCT
GTGACGTCGCGGACGTCTCTTGTTCCTCATGTGGAGCATGCGATTGTTCC
CCGGTCGTCTACCTCCCACCCTGACAATCCGGTTCCAGAGGAGCCTCGTG
GCGTTCGCTCGCTCTCGATAACTGATGTGAACTTCAGTGTCTCCACGCCG
TCTTCGCCGGAGACAGACACTACCAGCTCAGAGACAGCGTCGGGGGTCCA
GACTCCTGCCACTGAAATTCAATCCGAAGCTGAAGAATCCACTCGCGATG
GCCCCGAAAAGCAACGACGAGCATCTACCGTGCTCATCTCCCAGAACTCT
GATGACATGAGACGTATCTTGGAAAATGTGGGATCTAGCGGTACACAGAA
GCTTCAGCCGCTTTGCTGTGGTGGTGGATGCTGCCGCAGCAAGCCCTTGG
TGAACTTCACACCTCCACTGGCCGGAGTGAAAGCAATCACTCCCCCAGAC
AACAAGGCCTATCAATGTTTGAAGCTCAATGTCGATTACCTCACTTTGGA
CAGCGAGCTGAGCAACGTCGCTCCTTTGCCCGAGAAGACGGTCTCCTTCT
CGTCCGTCCCAGGCTACGCAGTAGATGTGGAGCTGGGACCCGCAGACCAT
CCTCCTTCTTTCGTCCAGCCTCACCCACCATACAATGTCTACCGGGCGCC
CTTGTACCATGCGCGCGAGCTGACAGGGTCAGGTGCGGAGAAGCGGACGT
ATCACTTTGACATTGACGTCACCGACTACCCTGCAGAGAGTGGAAATGTC
GACTTCATAGTCGGTGGTGCCATTGGGGTGTGTCCTAAGAACAAGGAAGA
GGAGGTCGATGACATCTTTAACCAGCTTGGTGTTCCTAAGTTTATCCGTG
ATAAGAAAATCGTCGTACGCACTGAGAAGGGCCGCTGGCCCACCATCTGG
GGTGATGACCAGCCCCGTGAGCTGATCACGACCCGAAGAGAATTGTTGAG
CTGGTGCTCTGATATCCAGAGTTATGCCCCTAACAAGGCTCTGTTCCGCT
TACTCGGCGAGTATGCCAGCGATCCTAGCGAAAAGAAGATCCTCCTGTTC
CTTTCCTCCGCCCAAGGCCAAGGTGCTTTCTGTGACCTGCGCACCAGCTC
CCACGTCACCGTCTCCCAGCTGCTTCACGCATTCCCTTCCTCTCACCCTC
CCTTGGATCACCTTCTCTCCGTCCTGAACACCCTCATGCCCCGCTTCTAC
TCACTATCCCAAGATCCCCTTCTGTCATGCAAGCAGAAGGGCTCCGTGAC
TCGTCGTGTGATCGAAGTTGCGGTAACCGTGGCCGAGTCTGATGATTGGA
AGGGAGGCCTCCGCACTGGTGTGGGATCTGGATATCTCGAGCGCGTTGCA
CGACGACTGATTGACGCTGAAAAGAAGGGCATCGACCCGCAGACTCTTGA
CCTCCACGTACCTATGTTCCGAGGCCTGATGGCCAACCCTCTAGCCAAGC
GCTTCGCATCCGATGGCCCTATGCTGCTTATCGGCGCGGGAGTTGGCATT
GCTCCGTTCCGCGGTTTCGTGCAGCGACGCCTGCAGTCTGCCAACTGTGC
GAACAAGGTCTGGGTGCTGCAGGGTGTTCGCGACTCTTTGCTGGACGAGC
TCTACCGCGGCGAGTGGGGTGTCGAAGAAGAAAAGGTGCGAACAGTCGTC
CAGAGCCGTCGCGGCGAGAGCAAGTACGTGCAAGAGGAGGTCCGGAACCA
AGCTGATCTTGTCTGGTACGTGATCAACGCTTTGGACGGGCGTGTCTTTG
TCTGCGGTAGCGGAAAGGGCATGGGAGAGGGCGTTGAAGCCGCCTTGATC
GACGTAGCCATGGCCAAGGGTAACCTCAACATGGAAGAAGCGACATTGTT
CTGGGAGAACAAGAAGGAAGCTGGACAGTACATTGCAATGGGAAACATGG
TAATTCACGCCGTTCTTCCTCCACCGCCGCCGTCGAGGCCTGTGACGTCG
CGGACGTCTCTTGTTCCTCATGTGGAGCATGCGATTGTTCCCCGGTCGTC
TACCTCCCACCCTGACAATCCGGTTCCAGAGGAGCCTCGTGGCGTTCGCT
CGCTCTCGATAACTGATGTGAACTTCAGTGTCTCCACGCCGTCTTCGCCG
GAGACAGACACTACCAGCTCAGAGACAGCGTCGGGGGTCCAGACTCCTGC
CACTGAAATTCAATCCGAAGCTGAAGAATCCACTCGCGATGGCCCCGAAA
AGCAACGACGAGCATCTACCGTGCTCATCTCCCAGAACTCTGATGACATG
AGACGTATCTTGGAAAATGTGGGATCTAGCGGTACACAGAAGCTTCAGCC
GCTTTGCTGTGGTGGTGGATGCTGCCGCAGCAAGCCCTTGGTGAACTTCA
CACCTCCACTGGCCGGAGTGAAAGCAATCACTCCCCCAGACAACAAGGCC
TATCAATGTTTGAAGCTCAATGTCGATTACCTCACTTTGGACAGCGAGCT
GAGCAACGTCGCTCCTTTGCCCGAGAAGACGGTCTCCTTCTCGTCCGTCC
CAGGCTACGCAGTAGATGTGGAGCTGGGACCCGCAGACCATCCTCCTTCT
TTCGTCCAGCCTCACCCACCATACAATGTCTACCGGGCGCCCTTGTACCA
TGCGCGCGAGCTGACAGGGTCAGGTGCGGAGAAGCGGACGTATCACTTTG
ACATTGACGTCACCGACTACCCTGCAGAGAGTGGAAATGTCGACTTCATA
GTCGGTGGTGCCATTGGGGTGTGTCCTAAGAACAAGGAAGAGGAGGTCGA
TGACATCTTTAACCAGCTTGGTGTTCCTAAGTTTATCCGTGATAAGAAAA
TCGTCGTACGCACTGAGAAGGGCCGCTGGCCCACCATCTGGGGTGATGAC
CAGCCCCGTGAGCTGATCACGACCCGAAGAGAATTGTTGAGCTGGTGCTC
TGATATCCAGAGTTATGCCCCTAACAAGGCTCTGTTCCGCTTACTCGGCG
AGTATGCCAGCGATCCTAGCGAAAAGAAGATCCTCCTGTTCCTTTCCTCC
GCCCAAGGCCAAGGTGCTTTCTGTGACCTGCGCACCAGCTCCCACGTCAC
CGTCTCCCAGCTGCTTCACGCATTCCCTTCCTCTCACCCTCCCTTGGATC
ACCTTCTCTCCGTCCTGAACACCCTCATGCCCCGCTTCTACTCACTATCC
CAAGATCCCCTTCTGTCATGCAAGCAGAAGGGCTCCGTGACTCGTCGTGT
GATCGAAGTTGCGGTAACCGTGGCCGAGTCTGATGATTGGAAGGGAGGCC
TCCGCACTGGTGTGGGATCTGGATATCTCGAGCGCGTTGCACGACGACTG
ATTGACGCTGAAAAGAAGGGCATCGACCCGCAGACTCTTGACCTCCACGT
ACCTATGTTCCGAGGCCTGATGGCCAACCCTCTAGCCAAGCGCTTCGCAT
CCGATGGCCCTATGCTGCTTATCGGCGCGGGAGTTGGCATTGCTCCGTTC
CGCGGTTTCGTGCAGCGACGCCTGCAGTCTGCCAACTGTGCGAACAAGGT
CTGGGTGCTGCAGGGTGTTCGCGACTCTTTGCTGGACGAGCTCTACCGCG
GCGAGTGGGGTGTCGAAGAAGAAAAGGTGCGAACAGTCGTCCAGAGCCGT
CGCGGCGAGAGCAAGTACGTGCAAGAGGAGGTCCGGAACCAAGCTGATCT
TGTCTGGTACGTGATCAACGCTTTGGACGGGCGTGTCTTTGTCTGCGGTA
GCGGAAAGGGCATGGGAGAGGGCGTTGAAGCCGCCTTGATCGACGTAGCC
ATGGCCAAGGGTAACCTCAACATGGAAGAAGCGACATTGTTCTGGGAGAA
CAAGAAGGAAGCTGGACAGTACATTGCAATGGGAAACATGGTAATTCACG
CCGTTCTTCCTCCACCGCCGCCGTCGAGGCCTGTGACGTCGCGGACGTCT
CTTGTTCCTCATGTGGAGCATGCGATTGTTCCCCGGTCGTCTACCTCCCA
CCCTGACAATCCGGTTCCAGAGGAGCCTCGTGGCGTTCGCTCGCTCTCGA
TAACTGATGTGAACTTCAGTGTCTCCACGCCGTCTTCGCCGGAGACAGAC
ACTACCAGCTCAGAGACAGCGTCGGGGGTCCAGACTCCTGCCACTGAAAT
TCAATCCGAAGCTGAAGAATCCACTCGCGATGGCCCCGAAAAGCAACGAC
GAGCATCTACCGTGCTCATCTCCCAGAACTCTGATGACATGAGACGTATC
TTGGAAAATGTGGGATCTAGCGGTACACAGAAGCTTCAGCCGCTTTGCTG
TGGTGGTGGATGCTGCCGCAGCAAGCCCTTGGTGAACTTCACACCTCCAC
TGGCCGGAGTGAAAGCAATCACTCCCCCAGACAACAAGGCCTATCAATGT
TTGAAGCTCAATGTCGATTACCTCACTTTGGACAGCGAGCTGAGCAACGT
CGCTCCTTTGCCCGAGAAGACGGTCTCCTTCTCGTCCGTCCCAGGCTACG
CAGTAGATGTGGAGCTGGGACCCGCAGACCATCCTCCTTCTTTCGTCCAG
CCTCACCCACCATACAATGTCTACCGGGCGCCCTTGTACCATGCGCGCGA
GCTGACAGGGTCAGGTGCGGAGAAGCGGACGTATCACTTTGACATTGACG
TCACCGACTACCCTGCAGAGAGTGGAAATGTCGACTTCATAGTCGGTGGT
GCCATTGGGGTGTGTCCTAAGAACAAGGAAGAGGAGGTCGATGACATCTT
TAACCAGCTTGGTGTTCCTAAGTTTATCCGTGATAAGAAAATCGTCGTAC
GCACTGAGAAGGGCCGCTGGCCCACCATCTGGGGTGATGACCAGCCCCGT
GAGCTGATCACGACCCGAAGAGAATTGTTGAGCTGGTGCTCTGATATCCA
GAGTTATGCCCCTAACAAGGCTCTGTTCCGCTTACTCGGCGAGTATGCCA
GCGATCCTAGCGAAAAGAAGATCCTCCTGTTCCTTTCCTCCGCCCAAGGC
CAAGGTGCTTTCTGTGACCTGCGCACCAGCTCCCACGTCACCGTCTCCCA
GCTGCTTCACGCATTCCCTTCCTCTCACCCTCCCTTGGATCACCTTCTCT
CCGTCCTGAACACCCTCATGCCCCGCTTCTACTCACTATCCCAAGATCCC
CTTCTGTCATGCAAGCAGAAGGGCTCCGTGACTCGTCGTGTGATCGAAGT
TGCGGTAACCGTGGCCGAGTCTGATGATTGGAAGGGAGGCCTCCGCACTG
GTGTGGGATCTGGATATCTCGAGCGCGTTGCACGACGACTGATTGACGCT
GAAAAGAAGGGCATCGACCCGCAGACTCTTGACCTCCACGTACCTATGTT
CCGAGGCCTGATGGCCAACCCTCTAGCCAAGCGCTTCGCATCCGATGGCC
CTATGCTGCTTATCGGCGCGGGAGTTGGCATTGCTCCGTTCCGCGGTTTC
GTGCAGCGACGCCTGCAGTCTGCCAACTGTGCGAACAAGGTCTGGGTGCT
GCAGGGTGTTCGCGACTCTTTGCTGGACGAGCTCTACCGCGGCGAGTGGG
GTGTCGAAGAAGAAAAGGTGCGAACAGTCGTCCAGAGCCGTCGCGGCGAG
AGCAAGTACGTGCAAGAGGAGGTCCGGAACCAAGCTGATCTTGTCTGGTA
CGTGATCAACGCTTTGGACGGGCGTGTCTTTGTCTGCGGTAGCGGAAAGG
GCATGGGAGAGGGCGTTGAAGCCGCCTTGATCGACGTAGCCATGGCCAAG
GGTAACCTCAACATGGAAGAAGCGACATTGTTCTGGGAGAACAAGAAGGA
AGCTGGACAGTACATTGCAATGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008913-T1.utr3p1 | KJC3_008913-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008913-T1.utr5p1 | KJC3_008913-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR017938 |
| DBxref | InterPro:IPR017927 |
| DBxref | InterPro:IPR023173 |
| DBxref | InterPro:IPR001433 |
| DBxref | InterPro:IPR003097 |
| DBxref | InterPro:IPR039261 |
| DBxref | InterPro:IPR001709 |
| DBxref | PFAM:PF00175 |
| DBxref | PFAM:PF00667 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3460580..3463713 - |
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