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KJC3_008918-T1, KJC3_008918-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008918-T1
Unique NameKJC3_008918-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3476372..3477931-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008918-T1 ID=KJC3_008918-T1|Name=KJC3_008918-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1560bp|location=Sequence derived from alignment at ch6:3476372..3477931- (Aspergillus niger KJC3)
TTTATTATTATGATGGATTCGGGTTCCCCTTAAATCATCTTCCACCAACA
CCACCACCACCTTCTCCTCCCCCCACAGCCCTTTACCGCTACCGTTTAGG
CCACCAGCTTTCCTGTTTCCTTTCTACTCAGCTTCACTTCCTTCCCGTGA
CTTATCACATCCCGTATCAACCATGGTATGTGCCTTCTTCCTCGCTGTCC
CGGCCAGTTGTGTTGAAAATCCCCCACTTTGCGGGGCAGATCTGCCTGGC
ATTCTCAACAGGATTGCTGACATCGCATCGTCTAGGCCGACTCTCTGACC
GAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTGTGAGTGC
TCCCTGAATGACCCTCCGATCATCCTGATCGATGAGCTATCTTTACCGGA
GCATAATGCTAATGTGTTTTCGGACTTAATAGGACAAGGATGGCGATGGT
GGGTGGAATTCTATCCCCTTCACATTATACCTGTAGCGCTCGATCCGACT
GCGGGATTTCGACAGCATTTTCCAGAACGATTTGGATCATAATACTAATT
TAAATCGGTGAATCAGGCCAGATCACCACCAAGGAGCTCGGCACTGTGAT
GCGCTCCCTTGGCCAGAACCCCTCCGAGTCTGAGCTTCAGGACATGATCA
ACGAGGTTGACGCTGACAACAACGGAACGATCGACTTCCCCGGTATGTGT
TAGATTTACGCCTGTAAGGCGGAAATGCGGGCTGGATTGTGATTGACTTT
TGCCGCCAGAATTCCTTACCATGATGGCTCGTAAGATGAAGGACACCGAC
TCCGAGGAGGAAATCCGCGAGGCTTTCAAGGTCTTCGACCGCGACAACAA
TGGTTTTATCTCCGCCGCGGAGCTGCGCCACGTCATGACCTCCATTGGCG
AGAAGCTCACCGACGACGAAGTCGATGAGATGATCCGTGAGGCGGACCAG
GACGGTGATGGCCGCATCGACTGTATGTTTACCATGCCCGATTATACTCA
TAACATAACATACTGACTCTGCTACCAGACAACGAGTTCGTCCAGCTCAT
GATGCAAAAATAAACGGTTCTTCATGTTCTATTTGTCTTGTGTTAGCGGA
AAGGGTGGGGAGCAATGAAATATACTCCACAATGTCCCATCTTCTATCCC
ATCCCGTCCCTTGTAGTCTCATCATTTGGCTATGACTCTTATTCATCTTA
ATGGTCGAGCGCTTCGCATTACCAATGTTGGTTCTAATGTTGCAGGAATG
GTAGAGGCGACCATATAGGTCTAGACTGGTTTGAGCGAGCTGAGATTGAA
CATGTCAGATTGGGAGGGCTCTATCTTTTCTAGGGGTTCCTGCGTGATGT
GGCCCGCAAGAGTTTTTTGTCCCTCTCCATAATACCCTTTGTCCCTCTTA
CCCCTTTCACCATTGTCCATAGGTCCCATGTCGTGTTCGTGATTCTAATC
GATCGACATCTCGTAGTCGATTGCATCGGATAATGATCATTGGTATTATA
AGAGCGTTTTGATGTAGACAGGAGACAATGGCCTTATGCTGCTAGTTCAT
TGATTCTCAC
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Coding sequence (CDS) from alignment at ch6:3476372..3477931-

>KJC3_008918-T1 ID=KJC3_008918-T1|Name=KJC3_008918-T1|organism=Aspergillus niger KJC3|type=CDS|length=2700bp|location=Sequence derived from alignment at ch6:3476372..3477931- (Aspergillus niger KJC3)
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
ACAACGAGTTCGTCCAGCTCATGATGCAAAAATAAAATTCCTTACCATGA
TGGCTCGTAAGATGAAGGACACCGACTCCGAGGAGGAAATCCGCGAGGCT
TTCAAGGTCTTCGACCGCGACAACAATGGTTTTATCTCCGCCGCGGAGCT
GCGCCACGTCATGACCTCCATTGGCGAGAAGCTCACCGACGACGAAGTCG
ATGAGATGATCCGTGAGGCGGACCAGGACGGTGATGGCCGCATCGACTGC
CAGATCACCACCAAGGAGCTCGGCACTGTGATGCGCTCCCTTGGCCAGAA
CCCCTCCGAGTCTGAGCTTCAGGACATGATCAACGAGGTTGACGCTGACA
ACAACGGAACGATCGACTTCCCCGGACAAGGATGGCGATGGCCGACTCTC
TGACCGAAGAGCAAGTTTCTGAGTACAAGGAGGCCTTCTCCCTCTTTATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAM1KJC3_008918Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008918-T1KJC3_008918-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008918-T1.cdsKJC3_008918-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008918-T1.utr3p1KJC3_008918-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008918-T1.exon6KJC3_008918-T1.exon6Aspergillus niger KJC3exon
KJC3_008918-T1.exon5KJC3_008918-T1.exon5Aspergillus niger KJC3exon
KJC3_008918-T1.exon4KJC3_008918-T1.exon4Aspergillus niger KJC3exon
KJC3_008918-T1.exon3KJC3_008918-T1.exon3Aspergillus niger KJC3exon
KJC3_008918-T1.exon2KJC3_008918-T1.exon2Aspergillus niger KJC3exon
KJC3_008918-T1.exon1KJC3_008918-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008918-T1.utr5p1KJC3_008918-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR002048
DBxrefPFAM:PF08726
DBxrefPFAM:PF14658
DBxrefPFAM:PF13833
DBxrefPFAM:PF13499
DBxrefPFAM:PF13405
DBxrefPFAM:PF13202
DBxrefPFAM:PF00036
Producttranslation elongation factor EF1B gamma
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3476372..3477931 -
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