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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3479308..3480894+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008919-T1 ID=KJC3_008919-T1|Name=KJC3_008919-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1587bp|location=Sequence derived from alignment at ch6:3479308..3480894+ (Aspergillus niger KJC3) ATCGAATACACCCAACGACACTCAATTCTACGACGCGGAAACGGCCTATA
CACCTCGCTCCCATACCACATGTCCGGATATTCTGCTCTGAGCCTATTGT
GACTTGAATCTCGCTATTCATTCTAACCACATCCCTGGCTGGACCATGAT
CAGGGTGGCCTAAGAGTGTCCCCGACGAAGGATCACCGCAGACCATCAAC
CCTCTCTACCTATCCTTCACAATGTGGCGGGACCGTACCAACCTGTAATG
CATCCCGGGCTAAGTTATGGTGGATAGCGAAGATAAGGAACTAACAACTA
TCTCAAAACAGCTACATTTCCTACCGCCAGTCGTTCGCGCATCATCCAGC
CAAGAAGCCACGTTATCTCGGAGCGTCCAATGGCTTCTCGGATAGCCTAT
CGCAGCCCGAGGAGAGCCGACGACTTATTTCAGAAACAGGAGGACTCGAC
GATGATGGCGATGCAATCATTGAGATGGACGTTTTACCCCCGCGCTGGGT
CGACGTACAGGAGGAAGTGACGGAGCTACTTGCGGACATTGCGCAGAAGT
CCTCCCACCTCGATAAGCTACACCAGAAACACCTTCTACCTGGATTCGGA
GACGAGGACGTACGAAAGCAAGACGAGGTAGTTATAGAGCGGCTAACGCA
GGACATCACGCGCGCCTTCCATGAATGCCAGAAAGCGGTAAAGAAGATTG
AGACGATGGTACGGGAAGCCCAACAACAGGGTGGAGTTAGCAGCGGCGAT
GAAACTATGGCCAAGAACTTGCAGATATCCCTTGCTGCTAGGGTGCAAGA
GGCTAGTGCTCGGTTTCGGAAGAAACAGAGTACCTATTTGAAGAGTGAGT
TTATCCTGGGCTCAGCTGCGTCTGTTCGTTGAGCTAACCGAGTTGCCTGG
TAGAATTACGAGGATTGGAGGGCGGATCAGCGCCATTTGAACGGTCCCCG
ACACCGATGCAGAATCCATACACAGACCCGTCGCTAATGGAATCCGATGC
GGACAAGTCGTTCTCGCAATCTACACTAATGCAAACGTCTCAACGACTGA
CGGGCCAGAACGATGCCGCCATTGAACAGCGGGAGCGGGAAATCAACGAC
ATCGCGAAAGGAATTATCGAGCTGTCGGATATTTTCCGTGAGTTGCAGTC
TATGGTTATCGACCAGGGTACTATGCTGGATCGGATAGACTATAATATTG
AGCGGATGGGCACGGAGGTCAAGGCCGCGGATAAGGAGTTGAAAGTGGTA
CGTTTGCGTCCGGTGCAGCCACCCGAAGTTAAGTTTCCACTAACCAATCT
GCATATTGTAGGCTACGAACTACCAACGACGTACAGTGAAGCGCAAGATC
ATGCTCCTGCTGGTGATCATAGTCGCAGGCCTGTTTATCGTTCTACTGGT
CAAGCCGAAGAAGCACAGTTCCCCGGATCCCGCTCCCGCCCCGGCGCCGC
CACCTCCCCCGCAAACTAATGAACAGCCGCCCGCAATGGCTCCTCGTGCC
TTCCATACTATATACCGCCGCAAGAGGAGTCCCTCTTCGTTACGGACTGC
GAGAAACAAATGGGGTGATCCGGATATATTTCGATAG back to topCoding sequence (CDS) from alignment at ch6:3479308..3480894+ >KJC3_008919-T1 ID=KJC3_008919-T1|Name=KJC3_008919-T1|organism=Aspergillus niger KJC3|type=CDS|length=4704bp|location=Sequence derived from alignment at ch6:3479308..3480894+ (Aspergillus niger KJC3) ATGTGGCGGGACCGTACCAACCTCTACATTTCCTACCGCCAGTCGTTCGC GCATCATCCAGCCAAGAAGCCACGTTATCTCGGAGCGTCCAATGGCTTCT CGGATAGCCTATCGCAGCCCGAGGAGAGCCGACGACTTATTTCAGAAACA GGAGGACTCGACGATGATGGCGATGCAATCATTGAGATGGACGTTTTACC CCCGCGCTGGGTCGACGTACAGGAGGAAGTGACGGAGCTACTTGCGGACA TTGCGCAGAAGTCCTCCCACCTCGATAAGCTACACCAGAAACACCTTCTA CCTGGATTCGGAGACGAGGACGTACGAAAGCAAGACGAGGTAGTTATAGA GCGGCTAACGCAGGACATCACGCGCGCCTTCCATGAATGCCAGAAAGCGG TAAAGAAGATTGAGACGATGGTACGGGAAGCCCAACAACAGGGTGGAGTT AGCAGCGGCGATGAAACTATGGCCAAGAACTTGCAGATATCCCTTGCTGC TAGGGTGCAAGAGGCTAGTGCTCGGTTTCGGAAGAAACAGAGTACCTATT TGAAGAAATTACGAGGATTGGAGGGCGGATCAGCGCCATTTGAACGGTCC CCGACACCGATGCAGAATCCATACACAGACCCGTCGCTAATGGAATCCGA TGCGGACAAGTCGTTCTCGCAATCTACACTAATGCAAACGTCTCAACGAC TGACGGGCCAGAACGATGCCGCCATTGAACAGCGGGAGCGGGAAATCAAC GACATCGCGAAAGGAATTATCGAGCTGTCGGATATTTTCCGTGAGTTGCA GTCTATGGTTATCGACCAGGGTACTATGCTGGATCGGATAGACTATAATA TTGAGCGGATGGGCACGGAGGTCAAGGCCGCGGATAAGGAGTTGAAAGTG GCTACGAACTACCAACGACGTACAGTGAAGCGCAAGATCATGCTCCTGCT GGTGATCATAGTCGCAGGCCTGTTTATCGTTCTACTGGTCAAGCCGAAGA AGCACAGTTCCCCGGATCCCGCTCCCGCCCCGGCGCCGCCACCTCCCCCG CAAACTAATGAACAGCCGCCCGCAATGGCTCCTCGTGCCTTCCATACTAT ATACCGCCGCAAGAGGAGTCCCTCTTCGTTACGGACTGCGAGAAACAAAT GGGGTGATCCGGATATATTTCGATAGATGTGGCGGGACCGTACCAACCTC TACATTTCCTACCGCCAGTCGTTCGCGCATCATCCAGCCAAGAAGCCACG TTATCTCGGAGCGTCCAATGGCTTCTCGGATAGCCTATCGCAGCCCGAGG AGAGCCGACGACTTATTTCAGAAACAGGAGGACTCGACGATGATGGCGAT GCAATCATTGAGATGGACGTTTTACCCCCGCGCTGGGTCGACGTACAGGA GGAAGTGACGGAGCTACTTGCGGACATTGCGCAGAAGTCCTCCCACCTCG ATAAGCTACACCAGAAACACCTTCTACCTGGATTCGGAGACGAGGACGTA CGAAAGCAAGACGAGGTAGTTATAGAGCGGCTAACGCAGGACATCACGCG CGCCTTCCATGAATGCCAGAAAGCGGTAAAGAAGATTGAGACGATGGTAC GGGAAGCCCAACAACAGGGTGGAGTTAGCAGCGGCGATGAAACTATGGCC AAGAACTTGCAGATATCCCTTGCTGCTAGGGTGCAAGAGGCTAGTGCTCG GTTTCGGAAGAAACAGAGTACCTATTTGAAGAAATTACGAGGATTGGAGG GCGGATCAGCGCCATTTGAACGGTCCCCGACACCGATGCAGAATCCATAC ACAGACCCGTCGCTAATGGAATCCGATGCGGACAAGTCGTTCTCGCAATC TACACTAATGCAAACGTCTCAACGACTGACGGGCCAGAACGATGCCGCCA TTGAACAGCGGGAGCGGGAAATCAACGACATCGCGAAAGGAATTATCGAG CTGTCGGATATTTTCCGTGAGTTGCAGTCTATGGTTATCGACCAGGGTAC TATGCTGGATCGGATAGACTATAATATTGAGCGGATGGGCACGGAGGTCA AGGCCGCGGATAAGGAGTTGAAAGTGGCTACGAACTACCAACGACGTACA GTGAAGCGCAAGATCATGCTCCTGCTGGTGATCATAGTCGCAGGCCTGTT TATCGTTCTACTGGTCAAGCCGAAGAAGCACAGTTCCCCGGATCCCGCTC CCGCCCCGGCGCCGCCACCTCCCCCGCAAACTAATGAACAGCCGCCCGCA ATGGCTCCTCGTGCCTTCCATACTATATACCGCCGCAAGAGGAGTCCCTC TTCGTTACGGACTGCGAGAAACAAATGGGGTGATCCGGATATATTTCGAT AGATGTGGCGGGACCGTACCAACCTCTACATTTCCTACCGCCAGTCGTTC GCGCATCATCCAGCCAAGAAGCCACGTTATCTCGGAGCGTCCAATGGCTT CTCGGATAGCCTATCGCAGCCCGAGGAGAGCCGACGACTTATTTCAGAAA CAGGAGGACTCGACGATGATGGCGATGCAATCATTGAGATGGACGTTTTA CCCCCGCGCTGGGTCGACGTACAGGAGGAAGTGACGGAGCTACTTGCGGA CATTGCGCAGAAGTCCTCCCACCTCGATAAGCTACACCAGAAACACCTTC TACCTGGATTCGGAGACGAGGACGTACGAAAGCAAGACGAGGTAGTTATA GAGCGGCTAACGCAGGACATCACGCGCGCCTTCCATGAATGCCAGAAAGC GGTAAAGAAGATTGAGACGATGGTACGGGAAGCCCAACAACAGGGTGGAG TTAGCAGCGGCGATGAAACTATGGCCAAGAACTTGCAGATATCCCTTGCT GCTAGGGTGCAAGAGGCTAGTGCTCGGTTTCGGAAGAAACAGAGTACCTA TTTGAAGAAATTACGAGGATTGGAGGGCGGATCAGCGCCATTTGAACGGT CCCCGACACCGATGCAGAATCCATACACAGACCCGTCGCTAATGGAATCC GATGCGGACAAGTCGTTCTCGCAATCTACACTAATGCAAACGTCTCAACG ACTGACGGGCCAGAACGATGCCGCCATTGAACAGCGGGAGCGGGAAATCA ACGACATCGCGAAAGGAATTATCGAGCTGTCGGATATTTTCCGTGAGTTG CAGTCTATGGTTATCGACCAGGGTACTATGCTGGATCGGATAGACTATAA TATTGAGCGGATGGGCACGGAGGTCAAGGCCGCGGATAAGGAGTTGAAAG TGGCTACGAACTACCAACGACGTACAGTGAAGCGCAAGATCATGCTCCTG CTGGTGATCATAGTCGCAGGCCTGTTTATCGTTCTACTGGTCAAGCCGAA GAAGCACAGTTCCCCGGATCCCGCTCCCGCCCCGGCGCCGCCACCTCCCC CGCAAACTAATGAACAGCCGCCCGCAATGGCTCCTCGTGCCTTCCATACT ATATACCGCCGCAAGAGGAGTCCCTCTTCGTTACGGACTGCGAGAAACAA ATGGGGTGATCCGGATATATTTCGATAGATGTGGCGGGACCGTACCAACC TCTACATTTCCTACCGCCAGTCGTTCGCGCATCATCCAGCCAAGAAGCCA CGTTATCTCGGAGCGTCCAATGGCTTCTCGGATAGCCTATCGCAGCCCGA GGAGAGCCGACGACTTATTTCAGAAACAGGAGGACTCGACGATGATGGCG ATGCAATCATTGAGATGGACGTTTTACCCCCGCGCTGGGTCGACGTACAG GAGGAAGTGACGGAGCTACTTGCGGACATTGCGCAGAAGTCCTCCCACCT CGATAAGCTACACCAGAAACACCTTCTACCTGGATTCGGAGACGAGGACG TACGAAAGCAAGACGAGGTAGTTATAGAGCGGCTAACGCAGGACATCACG CGCGCCTTCCATGAATGCCAGAAAGCGGTAAAGAAGATTGAGACGATGGT ACGGGAAGCCCAACAACAGGGTGGAGTTAGCAGCGGCGATGAAACTATGG CCAAGAACTTGCAGATATCCCTTGCTGCTAGGGTGCAAGAGGCTAGTGCT CGGTTTCGGAAGAAACAGAGTACCTATTTGAAGAAATTACGAGGATTGGA GGGCGGATCAGCGCCATTTGAACGGTCCCCGACACCGATGCAGAATCCAT ACACAGACCCGTCGCTAATGGAATCCGATGCGGACAAGTCGTTCTCGCAA TCTACACTAATGCAAACGTCTCAACGACTGACGGGCCAGAACGATGCCGC CATTGAACAGCGGGAGCGGGAAATCAACGACATCGCGAAAGGAATTATCG AGCTGTCGGATATTTTCCGTGAGTTGCAGTCTATGGTTATCGACCAGGGT ACTATGCTGGATCGGATAGACTATAATATTGAGCGGATGGGCACGGAGGT CAAGGCCGCGGATAAGGAGTTGAAAGTGGCTACGAACTACCAACGACGTA CAGTGAAGCGCAAGATCATGCTCCTGCTGGTGATCATAGTCGCAGGCCTG TTTATCGTTCTACTGGTCAAGCCGAAGAAGCACAGTTCCCCGGATCCCGC TCCCGCCCCGGCGCCGCCACCTCCCCCGCAAACTAATGAACAGCCGCCCG CAATGGCTCCTCGTGCCTTCCATACTATATACCGCCGCAAGAGGAGTCCC TCTTCGTTACGGACTGCGAGAAACAAATGGGGTGATCCGGATATATTTCG ATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0016020 | membrane |
Vocabulary: Biological Process
Term | Definition |
GO:0016192 | vesicle-mediated transport |
GO:0006886 | intracellular protein transport |
Vocabulary: Molecular Function
Term | Definition |
GO:0005484 | SNAP receptor activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_008919-T1.utr5p1 | KJC3_008919-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR010989 |
DBxref | InterPro:IPR006012 |
DBxref | InterPro:IPR000727 |
DBxref | PFAM:PF05739 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:3479308..3480894 + |
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