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KJC3_008921-T1, KJC3_008921-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008921-T1
Unique NameKJC3_008921-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3483067..3484502+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008921-T1 ID=KJC3_008921-T1|Name=KJC3_008921-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1436bp|location=Sequence derived from alignment at ch6:3483067..3484502+ (Aspergillus niger KJC3)
GCTGGAGCCTTACGTTCACATTCCCATCTCTCCTCATCTGACCCCTTTCT
CTTAGTCCAACTCCTTTGCAGAATCAATCTATAACTCAGTTTACGATAAT
TGAAAAGCATGGCGGATCGTTTCCCTTCATTGGAGGACTTCTCTGCGGGT
GAGCAGCCCGCATCATTCCCGCCAACACTACACAACACTAACCCCGGTGT
CTAGGCCAGACCGAAGTCGTCGAGACCAACGGTGCCTCTGATGAAAGTGA
CTTCCTAGCTCGCGAACGGGCTATGCTCGGTGATGATGCAGAACAATTTG
CGACTCCCCAAGATCATGTCGCCGACGACGTAAACAATGACGACGACTTA
CTGGGAGGTGCGGATGCCGCTCCGTCCGCGGGTGGTGTTGAGCCTCAGGA
GATCGCTGGATTCGAGTCTTCCTTCCCTGCTCTCGACACACAGAACGAGG
TATGAGATATGCTGGGTCTATTATCGGGGAGTACTCTAAAATAACCACCA
ATTCACAGCAAGTTGCCCCTGGCGGCACAATCACTGGGTCGGGTGCCCCC
TTTCCACCTACTGGGTATTCCAACTACACAACTCAAGCCCCGGAGGAGGA
GCCAGAGCCCGTTAGGTAGGTCTCGTCATATATCAGCAGCCAGGCAATCC
GTTCCTTGACTGTGTGTCATGTCGCTTGTAGGGGGTCCATGTGCTAATGG
AGATGTCTTGCAGGGAATGGCGTGAGCGGCGAGATGCGGATATCCAACGT
CGTGCGGAGATCTCGGAGGAGAAGAAGGAATCTACCATAAAGAAGGCGCG
CGAGGATATTGATGACTTTTATGTCTCATACAACAACAAGACGGACAAGC
TTCGTGCCCAAACCCGCGCTGAGGCAGATCAGTTCCTGTCCAACCGGGAG
GACACTTCTTCTGGAGGTACTAGCTGGGAACGCATTGCCAAGCTTGTCGA
CGTCTCCGGAAAGGGAACCAAGGGTGGTGCCAGCGGTTCTGGTAAGGAGC
GCTTCCGAGAGCTGCTCCTTGATCTTAAGAAGGACCAGAATGCCCCCGGT
GTCAGCGGCGTTTAAGCAGCTGAACGCATAGTGTGTTCTAATTACAAGGA
CTCTGGATACGAAGAAGGCCGAAGTCCACAAGATAAGTCTTCGGTCTGAT
GATACGATCTCAGAGAGTGGGGAACAGTTGTAGCACTGGAGGTTACCCTT
GTCCTCTGCATTCCAGCGCCTTTTATTATCATGACCGTCATCATTCATAC
CACCTCCGTGCGCCTCAGATTCTCGACCCGATCGTAACTTCTTATACAGG
AGTTCGTCAAGTACTTGAGCTAATGGCTATTTCTCAGTACATGTGTCTTC
TATTCAATTCTTAAACACATGTCTTTTTATGTTGCTTATTTCCCCTTGAT
GTAGGTAGATTACACACATTGGAACATTTTAATTGC
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Coding sequence (CDS) from alignment at ch6:3483067..3484502+

>KJC3_008921-T1 ID=KJC3_008921-T1|Name=KJC3_008921-T1|organism=Aspergillus niger KJC3|type=CDS|length=2976bp|location=Sequence derived from alignment at ch6:3483067..3484502+ (Aspergillus niger KJC3)
ATGGCGGATCGTTTCCCTTCATTGGAGGACTTCTCTGCGGGCCAGACCGA
AGTCGTCGAGACCAACGGTGCCTCTGATGAAAGTGACTTCCTAGCTCGCG
AACGGGCTATGCTCGGTGATGATGCAGAACAATTTGCGACTCCCCAAGAT
CATGTCGCCGACGACGTAAACAATGACGACGACTTACTGGGAGGTGCGGA
TGCCGCTCCGTCCGCGGGTGGTGTTGAGCCTCAGGAGATCGCTGGATTCG
AGTCTTCCTTCCCTGCTCTCGACACACAGAACGAGCAAGTTGCCCCTGGC
GGCACAATCACTGGGTCGGGTGCCCCCTTTCCACCTACTGGGTATTCCAA
CTACACAACTCAAGCCCCGGAGGAGGAGCCAGAGCCCGTTAGGGAATGGC
GTGAGCGGCGAGATGCGGATATCCAACGTCGTGCGGAGATCTCGGAGGAG
AAGAAGGAATCTACCATAAAGAAGGCGCGCGAGGATATTGATGACTTTTA
TGTCTCATACAACAACAAGACGGACAAGCTTCGTGCCCAAACCCGCGCTG
AGGCAGATCAGTTCCTGTCCAACCGGGAGGACACTTCTTCTGGAGGTACT
AGCTGGGAACGCATTGCCAAGCTTGTCGACGTCTCCGGAAAGGGAACCAA
GGGTGGTGCCAGCGGTTCTGGTAAGGAGCGCTTCCGAGAGCTGCTCCTTG
ATCTTAAGAAGGACCAGAATGCCCCCGGTGTCAGCGGCGTTTAAATGGCG
GATCGTTTCCCTTCATTGGAGGACTTCTCTGCGGGCCAGACCGAAGTCGT
CGAGACCAACGGTGCCTCTGATGAAAGTGACTTCCTAGCTCGCGAACGGG
CTATGCTCGGTGATGATGCAGAACAATTTGCGACTCCCCAAGATCATGTC
GCCGACGACGTAAACAATGACGACGACTTACTGGGAGGTGCGGATGCCGC
TCCGTCCGCGGGTGGTGTTGAGCCTCAGGAGATCGCTGGATTCGAGTCTT
CCTTCCCTGCTCTCGACACACAGAACGAGCAAGTTGCCCCTGGCGGCACA
ATCACTGGGTCGGGTGCCCCCTTTCCACCTACTGGGTATTCCAACTACAC
AACTCAAGCCCCGGAGGAGGAGCCAGAGCCCGTTAGGGAATGGCGTGAGC
GGCGAGATGCGGATATCCAACGTCGTGCGGAGATCTCGGAGGAGAAGAAG
GAATCTACCATAAAGAAGGCGCGCGAGGATATTGATGACTTTTATGTCTC
ATACAACAACAAGACGGACAAGCTTCGTGCCCAAACCCGCGCTGAGGCAG
ATCAGTTCCTGTCCAACCGGGAGGACACTTCTTCTGGAGGTACTAGCTGG
GAACGCATTGCCAAGCTTGTCGACGTCTCCGGAAAGGGAACCAAGGGTGG
TGCCAGCGGTTCTGGTAAGGAGCGCTTCCGAGAGCTGCTCCTTGATCTTA
AGAAGGACCAGAATGCCCCCGGTGTCAGCGGCGTTTAAATGGCGGATCGT
TTCCCTTCATTGGAGGACTTCTCTGCGGGCCAGACCGAAGTCGTCGAGAC
CAACGGTGCCTCTGATGAAAGTGACTTCCTAGCTCGCGAACGGGCTATGC
TCGGTGATGATGCAGAACAATTTGCGACTCCCCAAGATCATGTCGCCGAC
GACGTAAACAATGACGACGACTTACTGGGAGGTGCGGATGCCGCTCCGTC
CGCGGGTGGTGTTGAGCCTCAGGAGATCGCTGGATTCGAGTCTTCCTTCC
CTGCTCTCGACACACAGAACGAGCAAGTTGCCCCTGGCGGCACAATCACT
GGGTCGGGTGCCCCCTTTCCACCTACTGGGTATTCCAACTACACAACTCA
AGCCCCGGAGGAGGAGCCAGAGCCCGTTAGGGAATGGCGTGAGCGGCGAG
ATGCGGATATCCAACGTCGTGCGGAGATCTCGGAGGAGAAGAAGGAATCT
ACCATAAAGAAGGCGCGCGAGGATATTGATGACTTTTATGTCTCATACAA
CAACAAGACGGACAAGCTTCGTGCCCAAACCCGCGCTGAGGCAGATCAGT
TCCTGTCCAACCGGGAGGACACTTCTTCTGGAGGTACTAGCTGGGAACGC
ATTGCCAAGCTTGTCGACGTCTCCGGAAAGGGAACCAAGGGTGGTGCCAG
CGGTTCTGGTAAGGAGCGCTTCCGAGAGCTGCTCCTTGATCTTAAGAAGG
ACCAGAATGCCCCCGGTGTCAGCGGCGTTTAAATGGCGGATCGTTTCCCT
TCATTGGAGGACTTCTCTGCGGGCCAGACCGAAGTCGTCGAGACCAACGG
TGCCTCTGATGAAAGTGACTTCCTAGCTCGCGAACGGGCTATGCTCGGTG
ATGATGCAGAACAATTTGCGACTCCCCAAGATCATGTCGCCGACGACGTA
AACAATGACGACGACTTACTGGGAGGTGCGGATGCCGCTCCGTCCGCGGG
TGGTGTTGAGCCTCAGGAGATCGCTGGATTCGAGTCTTCCTTCCCTGCTC
TCGACACACAGAACGAGCAAGTTGCCCCTGGCGGCACAATCACTGGGTCG
GGTGCCCCCTTTCCACCTACTGGGTATTCCAACTACACAACTCAAGCCCC
GGAGGAGGAGCCAGAGCCCGTTAGGGAATGGCGTGAGCGGCGAGATGCGG
ATATCCAACGTCGTGCGGAGATCTCGGAGGAGAAGAAGGAATCTACCATA
AAGAAGGCGCGCGAGGATATTGATGACTTTTATGTCTCATACAACAACAA
GACGGACAAGCTTCGTGCCCAAACCCGCGCTGAGGCAGATCAGTTCCTGT
CCAACCGGGAGGACACTTCTTCTGGAGGTACTAGCTGGGAACGCATTGCC
AAGCTTGTCGACGTCTCCGGAAAGGGAACCAAGGGTGGTGCCAGCGGTTC
TGGTAAGGAGCGCTTCCGAGAGCTGCTCCTTGATCTTAAGAAGGACCAGA
ATGCCCCCGGTGTCAGCGGCGTTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030132clathrin coat of coated pit
GO:0030130clathrin coat of trans-Golgi network vesicle
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008921KJC3_008921Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008921-T1KJC3_008921-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008921-T1.utr5p1KJC3_008921-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008921-T1.exon1KJC3_008921-T1.exon1Aspergillus niger KJC3exon
KJC3_008921-T1.exon2KJC3_008921-T1.exon2Aspergillus niger KJC3exon
KJC3_008921-T1.exon3KJC3_008921-T1.exon3Aspergillus niger KJC3exon
KJC3_008921-T1.exon4KJC3_008921-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008921-T1.cdsKJC3_008921-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008921-T1.utr3p1KJC3_008921-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264XOC
DBxrefInterPro:IPR000996
DBxrefPFAM:PF01086
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3483067..3484502 +
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