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KJC3_008924-T1, KJC3_008924-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008924-T1
Unique NameKJC3_008924-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3489734..3491205+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008924-T1 ID=KJC3_008924-T1|Name=KJC3_008924-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1472bp|location=Sequence derived from alignment at ch6:3489734..3491205+ (Aspergillus niger KJC3)
TGGGCTGAGCCTTGTACTACTCCCTGTCCCCTCTCATCACTTGAACAGGG
ACAACCCAACGACTCGCTACAATGGACCGCATCCGCGGGCTTATCGCTCG
CCGGCCTACGTATGAAGCAATCGAGCAGCCGGTTGACGCCGACGATGAGA
GCATCCGCTCAACTCGTGAAGAGGAGCAGCATCCCCGTTTCTCCAAATAT
GAATACGCAGTATTCTTTCTCCTGGGAGTATCTATGCTATGGGCATGGTA
TGTCCGACCTTACAACATCCGCATTGACTGCATCTATCTGACTAGACCGG
GACGTCATAGGAACATGTTCCTCGCCGCTGCACCATACTTCTACCACCGT
TTCCACACAGACGACTGGGCAGCAACCCATTATCAGCCTTCAATATTGAC
CGTATCCACCGTTACTAACCTAGGTTCCTCGTTCATCCTAGCCAAACTAC
AGAAGGGAGCGTCCTATCCGAAGCGTGTCACCATCTCTCTGCTTATCAAC
ATCGTGGTGTTCACGCTCCTGGCCTTCTCCACTATCCTGATGAAGGATGT
CGCAGTGAGCACATACTTCAGCTTTCTCATGATCATGGTGTTCGGGGCCA
GTCTTGCGACCGGAATAAACCAGAATGGCGTGTACGCTTACGTCTCCGGC
TTTGGAAGAGAGGAGTATACCCAAGCCATCATGGGCGGCCAAGGCGTAGC
GGGTGTCCTACCCTGCATTGTCCAGATCCTCTCCGTGGTCTCCGTGCCAA
GTAAGAAGGAAGGACAAAAAGCACCACAGGAGTCCTCCAAATCCGCTTTC
GCCTACTTTATCACGGCGACAGCCGTGTCGTCCTTTGCTCTGCTAGCCTT
CCTATCCCTCGTCAAGCGACGCGCATCCTCAACCCTCTTAGACCCAACGG
ACGACCACAGCGACCCAGATGTGCCTGAGAACAAGTCCGTCAGCCTCTGG
ACGCTCTTCAAAAAGCTCCGCTTCATGGCCTCGGCCATCTTCCTCTGCTT
CACAGTCACCATGACCTTCCCCGTCTTTACAGCGGAGATCGAATCCGTCC
ACGACATTCCCGGACGATCTCGACTCTTTGATCAGGCTGTCTTCATCCCT
CTTGCATTCTTCTTCTGGAATGCAGGTGATCTGATGGGCCGAATGCTCGT
CCTGTTTCCCCGTCTCTCCCTTGTTAACCGTCCCTTCGTGTTGTTCCTCT
TTTCGATTGCTCGAGCCGCATTCATCCCGCTGTATCTTCTCTGCAACATT
CGCGGCCGGGGTGCAGTCGTCGAGAGCGATTTCTTCTACCTATTTATCGT
GCAGTTGCTGTTCGGCATAAGCAACGGGTACCTGGGAAGTAATTGCATGA
TGGGCGCTGGACAGTGGGTGTCTCCTGATGAACGTGAACCTGCAGGTGGG
TTCATGGGATTGATGCTCGTAGGTGGGCTAACTGCGGGAAGCTTGATGAG
CTTTCTGGTTGCTGGTGCTTGA
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Coding sequence (CDS) from alignment at ch6:3489734..3491205+

>KJC3_008924-T1 ID=KJC3_008924-T1|Name=KJC3_008924-T1|organism=Aspergillus niger KJC3|type=CDS|length=2676bp|location=Sequence derived from alignment at ch6:3489734..3491205+ (Aspergillus niger KJC3)
ATGGACCGCATCCGCGGGCTTATCGCTCGCCGGCCTACGTATGAAGCAAT
CGAGCAGCCGGTTGACGCCGACGATGAGAGCATCCGCTCAACTCGTGAAG
AGGAGCAGCATCCCCGTTTCTCCAAATATGAATACGCAGTATTCTTTCTC
CTGGGAGTATCTATGCTATGGGCATGGAACATGTTCCTCGCCGCTGCACC
ATACTTCTACCACCGTTTCCACACAGACGACTGGGCAGCAACCCATTATC
AGCCTTCAATATTGACCGTATCCACCGTTACTAACCTAGGTTCCTCGTTC
ATCCTAGCCAAACTACAGAAGGGAGCGTCCTATCCGAAGCGTGTCACCAT
CTCTCTGCTTATCAACATCGTGGTGTTCACGCTCCTGGCCTTCTCCACTA
TCCTGATGAAGGATGTCGCAGTGAGCACATACTTCAGCTTTCTCATGATC
ATGGTGTTCGGGGCCAGTCTTGCGACCGGAATAAACCAGAATGGCGTGTA
CGCTTACGTCTCCGGCTTTGGAAGAGAGGAGTATACCCAAGCCATCATGG
GCGGCCAAGGCGTAGCGGGTGTCCTACCCTGCATTGTCCAGATCCTCTCC
GTGGTCTCCGTGCCAAGTAAGAAGGAAGGACAAAAAGCACCACAGGAGTC
CTCCAAATCCGCTTTCGCCTACTTTATCACGGCGACAGCCGTGTCGTCCT
TTGCTCTGCTAGCCTTCCTATCCCTCGTCAAGCGACGCGCATCCTCAACC
CTCTTAGACCCAACGGACGACCACAGCGACCCAGATGTGCCTGAGAACAA
GTCCGTCAGCCTCTGGACGCTCTTCAAAAAGCTCCGCTTCATGGCCTCGG
CCATCTTCCTCTGCTTCACAGTCACCATGACCTTCCCCGTCTTTACAGCG
GAGATCGAATCCGTCCACGACATTCCCGGACGATCTCGACTCTTTGATCA
GGCTGTCTTCATCCCTCTTGCATTCTTCTTCTGGAATGCAGGTGATCTGA
TGGGCCGAATGCTCGTCCTGTTTCCCCGTCTCTCCCTTGTTAACCGTCCC
TTCGTGTTGTTCCTCTTTTCGATTGCTCGAGCCGCATTCATCCCGCTGTA
TCTTCTCTGCAACATTCGCGGCCGGGGTGCAGTCGTCGAGAGCGATTTCT
TCTACCTATTTATCGTGCAGTTGCTGTTCGGCATAAGCAACGGGTACCTG
GGAAGTAATTGCATGATGGGCGCTGGACAGTGGGTGTCTCCTGATGAACG
TGAACCTGCAGGTGGGTTCATGGGATTGATGCTCGTAGGTGGGCTAACTG
CGGGAAGCTTGATGAGCTTTCTGGTTGCTGGTGCTTGAATGGACCGCATC
CGCGGGCTTATCGCTCGCCGGCCTACGTATGAAGCAATCGAGCAGCCGGT
TGACGCCGACGATGAGAGCATCCGCTCAACTCGTGAAGAGGAGCAGCATC
CCCGTTTCTCCAAATATGAATACGCAGTATTCTTTCTCCTGGGAGTATCT
ATGCTATGGGCATGGAACATGTTCCTCGCCGCTGCACCATACTTCTACCA
CCGTTTCCACACAGACGACTGGGCAGCAACCCATTATCAGCCTTCAATAT
TGACCGTATCCACCGTTACTAACCTAGGTTCCTCGTTCATCCTAGCCAAA
CTACAGAAGGGAGCGTCCTATCCGAAGCGTGTCACCATCTCTCTGCTTAT
CAACATCGTGGTGTTCACGCTCCTGGCCTTCTCCACTATCCTGATGAAGG
ATGTCGCAGTGAGCACATACTTCAGCTTTCTCATGATCATGGTGTTCGGG
GCCAGTCTTGCGACCGGAATAAACCAGAATGGCGTGTACGCTTACGTCTC
CGGCTTTGGAAGAGAGGAGTATACCCAAGCCATCATGGGCGGCCAAGGCG
TAGCGGGTGTCCTACCCTGCATTGTCCAGATCCTCTCCGTGGTCTCCGTG
CCAAGTAAGAAGGAAGGACAAAAAGCACCACAGGAGTCCTCCAAATCCGC
TTTCGCCTACTTTATCACGGCGACAGCCGTGTCGTCCTTTGCTCTGCTAG
CCTTCCTATCCCTCGTCAAGCGACGCGCATCCTCAACCCTCTTAGACCCA
ACGGACGACCACAGCGACCCAGATGTGCCTGAGAACAAGTCCGTCAGCCT
CTGGACGCTCTTCAAAAAGCTCCGCTTCATGGCCTCGGCCATCTTCCTCT
GCTTCACAGTCACCATGACCTTCCCCGTCTTTACAGCGGAGATCGAATCC
GTCCACGACATTCCCGGACGATCTCGACTCTTTGATCAGGCTGTCTTCAT
CCCTCTTGCATTCTTCTTCTGGAATGCAGGTGATCTGATGGGCCGAATGC
TCGTCCTGTTTCCCCGTCTCTCCCTTGTTAACCGTCCCTTCGTGTTGTTC
CTCTTTTCGATTGCTCGAGCCGCATTCATCCCGCTGTATCTTCTCTGCAA
CATTCGCGGCCGGGGTGCAGTCGTCGAGAGCGATTTCTTCTACCTATTTA
TCGTGCAGTTGCTGTTCGGCATAAGCAACGGGTACCTGGGAAGTAATTGC
ATGATGGGCGCTGGACAGTGGGTGTCTCCTGATGAACGTGAACCTGCAGG
TGGGTTCATGGGATTGATGCTCGTAGGTGGGCTAACTGCGGGAAGCTTGA
TGAGCTTTCTGGTTGCTGGTGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:1901642nucleoside transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005337nucleoside transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008924KJC3_008924Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008924-T1.utr5p1KJC3_008924-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008924-T1.exon1KJC3_008924-T1.exon1Aspergillus niger KJC3exon
KJC3_008924-T1.exon2KJC3_008924-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008924-T1.cdsKJC3_008924-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008924-T1KJC3_008924-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR002259
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3489734..3491205 +
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