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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3587281..3588952- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008962-T1 ID=KJC3_008962-T1|Name=KJC3_008962-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1672bp|location=Sequence derived from alignment at ch6:3587281..3588952- (Aspergillus niger KJC3)
ATGTCCATTTCGGTAGTGAGGAGCCCAGTCCAAGGTGCTTGTGATGCTCG
AGTCATAGAAACTGGAAACAGCAGGTTTAAAGAGTGTCTGACTGCCACCC
CACCGTCTAGACAGACGTCTCAAGACTCGCAAGAAGACGACCCAAACGAC
TCAGCCCCTGATGGTGGTACAGCAGCGTGGCTAATCGTGGTGGGTGGATG
GTGTGCGATGTTTTCCAGTTATGGATGGCTTCATAGTAAGTTGCTGTATG
GACGATGGTTGAGGAGGCTGGGATATTCGGGTTCACTAATAATCAAGATG
AAAATTTACAATAGGCATCGGCGTGTTCCAGAACTACTATCAGAATGTCA
TGTTTCCTGGATATTCTGCAAGTACGATCGCGTGGATCTCTTCCCTCGAA
GTCTTTCTCATGCTTGCTTTAGTAAGATATAGCTTGCTCGTGGGTCTTCG
TGTTCAACATACTGATGGTGCGAGATTTATACAGGGCCCTATTGTCGGCT
GGCTGAGTGATACCTTTGGACCGCGCGCAGTCGTCATCGGAGGCTCATTC
TTCCATATCTTCGGTGTCATGATGGCTTCTATATCCACCAAATACTATCA
GATTTTGCTCGCGCAGGGAATCTGTAGTCCAATAGGTCTCTGTGCCATAG
CGCAGCCAGTCTTGAGTGTCATGCCCAACTGGTTCAACAAACGGTGCGGA
TTGGCGTACGGGATCATCTCTACTTCCGCCGGTATAGCAGGTATAATATT
GCCGATTATGATCAATCGACTCATTCCCAAAGTCGGCTTCGGTTGGGCCA
TGCGAATTGTCGCATTCATGATGTTGTTCTTTCTCATTATCGCTGCTCTC
ACTGTGAGGGAGCGCGTGCCTCCACGTCCAGAAGTGCTAAACAGAGAGAT
CCTCTTGCGCCCTTTCTGTGATGTGAAGATGGTCTTGCTTCTTGTAAGCG
GCATTTTGCTGAGCTTTGGGGTGTGGTGCCCAAGTAATTATATTGTCACA
TCGTCATTGGCTGTGGGAGTGCAGACCAATCTGTCACAGTACCTCGTGTC
CATACAGAATGCAGGAAGGTGAGTCTCTGCCCCCACTCTTTAATAGTACC
AGGAACAATATATTGATGTACGCTGTAGTCTTTTTGGACGTTTCTTTTGT
GGCGTGTTCGCAGATAAGTTCGGCACATACAACAGTTATATCTCTCTCAA
TGTCTGCTCCGGTATCCTGGTGTTGGCACTTTGGATCCCGGCTACCAGCA
ACTCAGCCATCATCGTCTTTGATGTACTGTTTGGATTCACGTCGGGCGCC
TACTACACTCTTCTCGTGGCATTGGTGGCACCCGTAGCCCCGCCTCGAGA
GATTGGATATTGGGCTGGACTGAACTTCTTTTTCGCATCAATCGCTGGAC
TTGTGACAGGGCCCATTGGAGGCGCAATATTAGCCCAAGATGACGGATCT
TACTGGGGAATGAAGGTCTACTCCGGCGTTCTCCTGCTTGCGGGAAGTGT
AGTTGTGCTGGGGACGCGACTGCGACTGACGGGAATGGTACTGTGGGCAA
AGTGTTGAGTGTCTAAAGCGTCATCTCAATACTTCTGTGTATGTATCTGG
TATCTCACGTCGCTGCATGGGAATCTGGTCTGGTGTTATCGGTCGCCACG
TGTGGTGGATGACGCATTCGTT back to topCoding sequence (CDS) from alignment at ch6:3587281..3588952- >KJC3_008962-T1 ID=KJC3_008962-T1|Name=KJC3_008962-T1|organism=Aspergillus niger KJC3|type=CDS|length=5424bp|location=Sequence derived from alignment at ch6:3587281..3588952- (Aspergillus niger KJC3)
TCTTTTTGGACGTTTCTTTTGTGGCGTGTTCGCAGATAAGTTCGGCACAT
ACAACAGTTATATCTCTCTCAATGTCTGCTCCGGTATCCTGGTGTTGGCA
CTTTGGATCCCGGCTACCAGCAACTCAGCCATCATCGTCTTTGATGTACT
GTTTGGATTCACGTCGGGCGCCTACTACACTCTTCTCGTGGCATTGGTGG
CACCCGTAGCCCCGCCTCGAGAGATTGGATATTGGGCTGGACTGAACTTC
TTTTTCGCATCAATCGCTGGACTTGTGACAGGGCCCATTGGAGGCGCAAT
ATTAGCCCAAGATGACGGATCTTACTGGGGAATGAAGGTCTACTCCGGCG
TTCTCCTGCTTGCGGGAAGTGTAGTTGTGCTGGGGACGCGACTGCGACTG
ACGGGAATGGTACTGTGGGCAAAGTGTTGAGGCCCTATTGTCGGCTGGCT
GAGTGATACCTTTGGACCGCGCGCAGTCGTCATCGGAGGCTCATTCTTCC
ATATCTTCGGTGTCATGATGGCTTCTATATCCACCAAATACTATCAGATT
TTGCTCGCGCAGGGAATCTGTAGTCCAATAGGTCTCTGTGCCATAGCGCA
GCCAGTCTTGAGTGTCATGCCCAACTGGTTCAACAAACGGTGCGGATTGG
CGTACGGGATCATCTCTACTTCCGCCGGTATAGCAGGTATAATATTGCCG
ATTATGATCAATCGACTCATTCCCAAAGTCGGCTTCGGTTGGGCCATGCG
AATTGTCGCATTCATGATGTTGTTCTTTCTCATTATCGCTGCTCTCACTG
TGAGGGAGCGCGTGCCTCCACGTCCAGAAGTGCTAAACAGAGAGATCCTC
TTGCGCCCTTTCTGTGATGTGAAGATGGTCTTGCTTCTTGTAAGCGGCAT
TTTGCTGAGCTTTGGGGTGTGGTGCCCAAGTAATTATATTGTCACATCGT
CATTGGCTGTGGGAGTGCAGACCAATCTGTCACAGTACCTCGTGTCCATA
CAGAATGCAGGAAGGCATCGGCGTGTTCCAGAACTACTATCAGAATGTCA
TGTTTCCTGGATATTCTGCAAGTACGATCGCGTGGATCTCTTCCCTCGAA
GTCTTTCTCATGCTTGCTTTAATGTCCATTTCGGTAGTGAGGAGCCCAGT
CCAAGGTGCTTGTGATGCTCGAGTCATAGAAACTGGAAACAGCAGGTTTA
AAGAGTGTCTGACTGCCACCCCACCGTCTAGACAGACGTCTCAAGACTCG
CAAGAAGACGACCCAAACGACTCAGCCCCTGATGGTGGTACAGCAGCGTG
GCTAATCGTGGTGGGTGGATGGTGTGCGATGTTTTCCAGTTATGGATGGC
TTCATATCTTTTTGGACGTTTCTTTTGTGGCGTGTTCGCAGATAAGTTCG
GCACATACAACAGTTATATCTCTCTCAATGTCTGCTCCGGTATCCTGGTG
TTGGCACTTTGGATCCCGGCTACCAGCAACTCAGCCATCATCGTCTTTGA
TGTACTGTTTGGATTCACGTCGGGCGCCTACTACACTCTTCTCGTGGCAT
TGGTGGCACCCGTAGCCCCGCCTCGAGAGATTGGATATTGGGCTGGACTG
AACTTCTTTTTCGCATCAATCGCTGGACTTGTGACAGGGCCCATTGGAGG
CGCAATATTAGCCCAAGATGACGGATCTTACTGGGGAATGAAGGTCTACT
CCGGCGTTCTCCTGCTTGCGGGAAGTGTAGTTGTGCTGGGGACGCGACTG
CGACTGACGGGAATGGTACTGTGGGCAAAGTGTTGAGGCCCTATTGTCGG
CTGGCTGAGTGATACCTTTGGACCGCGCGCAGTCGTCATCGGAGGCTCAT
TCTTCCATATCTTCGGTGTCATGATGGCTTCTATATCCACCAAATACTAT
CAGATTTTGCTCGCGCAGGGAATCTGTAGTCCAATAGGTCTCTGTGCCAT
AGCGCAGCCAGTCTTGAGTGTCATGCCCAACTGGTTCAACAAACGGTGCG
GATTGGCGTACGGGATCATCTCTACTTCCGCCGGTATAGCAGGTATAATA
TTGCCGATTATGATCAATCGACTCATTCCCAAAGTCGGCTTCGGTTGGGC
CATGCGAATTGTCGCATTCATGATGTTGTTCTTTCTCATTATCGCTGCTC
TCACTGTGAGGGAGCGCGTGCCTCCACGTCCAGAAGTGCTAAACAGAGAG
ATCCTCTTGCGCCCTTTCTGTGATGTGAAGATGGTCTTGCTTCTTGTAAG
CGGCATTTTGCTGAGCTTTGGGGTGTGGTGCCCAAGTAATTATATTGTCA
CATCGTCATTGGCTGTGGGAGTGCAGACCAATCTGTCACAGTACCTCGTG
TCCATACAGAATGCAGGAAGGCATCGGCGTGTTCCAGAACTACTATCAGA
ATGTCATGTTTCCTGGATATTCTGCAAGTACGATCGCGTGGATCTCTTCC
CTCGAAGTCTTTCTCATGCTTGCTTTAATGTCCATTTCGGTAGTGAGGAG
CCCAGTCCAAGGTGCTTGTGATGCTCGAGTCATAGAAACTGGAAACAGCA
GGTTTAAAGAGTGTCTGACTGCCACCCCACCGTCTAGACAGACGTCTCAA
GACTCGCAAGAAGACGACCCAAACGACTCAGCCCCTGATGGTGGTACAGC
AGCGTGGCTAATCGTGGTGGGTGGATGGTGTGCGATGTTTTCCAGTTATG
GATGGCTTCATATCTTTTTGGACGTTTCTTTTGTGGCGTGTTCGCAGATA
AGTTCGGCACATACAACAGTTATATCTCTCTCAATGTCTGCTCCGGTATC
CTGGTGTTGGCACTTTGGATCCCGGCTACCAGCAACTCAGCCATCATCGT
CTTTGATGTACTGTTTGGATTCACGTCGGGCGCCTACTACACTCTTCTCG
TGGCATTGGTGGCACCCGTAGCCCCGCCTCGAGAGATTGGATATTGGGCT
GGACTGAACTTCTTTTTCGCATCAATCGCTGGACTTGTGACAGGGCCCAT
TGGAGGCGCAATATTAGCCCAAGATGACGGATCTTACTGGGGAATGAAGG
TCTACTCCGGCGTTCTCCTGCTTGCGGGAAGTGTAGTTGTGCTGGGGACG
CGACTGCGACTGACGGGAATGGTACTGTGGGCAAAGTGTTGAGGCCCTAT
TGTCGGCTGGCTGAGTGATACCTTTGGACCGCGCGCAGTCGTCATCGGAG
GCTCATTCTTCCATATCTTCGGTGTCATGATGGCTTCTATATCCACCAAA
TACTATCAGATTTTGCTCGCGCAGGGAATCTGTAGTCCAATAGGTCTCTG
TGCCATAGCGCAGCCAGTCTTGAGTGTCATGCCCAACTGGTTCAACAAAC
GGTGCGGATTGGCGTACGGGATCATCTCTACTTCCGCCGGTATAGCAGGT
ATAATATTGCCGATTATGATCAATCGACTCATTCCCAAAGTCGGCTTCGG
TTGGGCCATGCGAATTGTCGCATTCATGATGTTGTTCTTTCTCATTATCG
CTGCTCTCACTGTGAGGGAGCGCGTGCCTCCACGTCCAGAAGTGCTAAAC
AGAGAGATCCTCTTGCGCCCTTTCTGTGATGTGAAGATGGTCTTGCTTCT
TGTAAGCGGCATTTTGCTGAGCTTTGGGGTGTGGTGCCCAAGTAATTATA
TTGTCACATCGTCATTGGCTGTGGGAGTGCAGACCAATCTGTCACAGTAC
CTCGTGTCCATACAGAATGCAGGAAGGCATCGGCGTGTTCCAGAACTACT
ATCAGAATGTCATGTTTCCTGGATATTCTGCAAGTACGATCGCGTGGATC
TCTTCCCTCGAAGTCTTTCTCATGCTTGCTTTAATGTCCATTTCGGTAGT
GAGGAGCCCAGTCCAAGGTGCTTGTGATGCTCGAGTCATAGAAACTGGAA
ACAGCAGGTTTAAAGAGTGTCTGACTGCCACCCCACCGTCTAGACAGACG
TCTCAAGACTCGCAAGAAGACGACCCAAACGACTCAGCCCCTGATGGTGG
TACAGCAGCGTGGCTAATCGTGGTGGGTGGATGGTGTGCGATGTTTTCCA
GTTATGGATGGCTTCATATCTTTTTGGACGTTTCTTTTGTGGCGTGTTCG
CAGATAAGTTCGGCACATACAACAGTTATATCTCTCTCAATGTCTGCTCC
GGTATCCTGGTGTTGGCACTTTGGATCCCGGCTACCAGCAACTCAGCCAT
CATCGTCTTTGATGTACTGTTTGGATTCACGTCGGGCGCCTACTACACTC
TTCTCGTGGCATTGGTGGCACCCGTAGCCCCGCCTCGAGAGATTGGATAT
TGGGCTGGACTGAACTTCTTTTTCGCATCAATCGCTGGACTTGTGACAGG
GCCCATTGGAGGCGCAATATTAGCCCAAGATGACGGATCTTACTGGGGAA
TGAAGGTCTACTCCGGCGTTCTCCTGCTTGCGGGAAGTGTAGTTGTGCTG
GGGACGCGACTGCGACTGACGGGAATGGTACTGTGGGCAAAGTGTTGAGG
CCCTATTGTCGGCTGGCTGAGTGATACCTTTGGACCGCGCGCAGTCGTCA
TCGGAGGCTCATTCTTCCATATCTTCGGTGTCATGATGGCTTCTATATCC
ACCAAATACTATCAGATTTTGCTCGCGCAGGGAATCTGTAGTCCAATAGG
TCTCTGTGCCATAGCGCAGCCAGTCTTGAGTGTCATGCCCAACTGGTTCA
ACAAACGGTGCGGATTGGCGTACGGGATCATCTCTACTTCCGCCGGTATA
GCAGGTATAATATTGCCGATTATGATCAATCGACTCATTCCCAAAGTCGG
CTTCGGTTGGGCCATGCGAATTGTCGCATTCATGATGTTGTTCTTTCTCA
TTATCGCTGCTCTCACTGTGAGGGAGCGCGTGCCTCCACGTCCAGAAGTG
CTAAACAGAGAGATCCTCTTGCGCCCTTTCTGTGATGTGAAGATGGTCTT
GCTTCTTGTAAGCGGCATTTTGCTGAGCTTTGGGGTGTGGTGCCCAAGTA
ATTATATTGTCACATCGTCATTGGCTGTGGGAGTGCAGACCAATCTGTCA
CAGTACCTCGTGTCCATACAGAATGCAGGAAGGCATCGGCGTGTTCCAGA
ACTACTATCAGAATGTCATGTTTCCTGGATATTCTGCAAGTACGATCGCG
TGGATCTCTTCCCTCGAAGTCTTTCTCATGCTTGCTTTAATGTCCATTTC
GGTAGTGAGGAGCCCAGTCCAAGGTGCTTGTGATGCTCGAGTCATAGAAA
CTGGAAACAGCAGGTTTAAAGAGTGTCTGACTGCCACCCCACCGTCTAGA
CAGACGTCTCAAGACTCGCAAGAAGACGACCCAAACGACTCAGCCCCTGA
TGGTGGTACAGCAGCGTGGCTAATCGTGGTGGGTGGATGGTGTGCGATGT
TTTCCAGTTATGGATGGCTTCATA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008962-T1.utr3p1 | KJC3_008962-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3587281..3588952 - |
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