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KJC3_008967-T1, KJC3_008967-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008967-T1
Unique NameKJC3_008967-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3605104..3606666+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008967-T1 ID=KJC3_008967-T1|Name=KJC3_008967-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1563bp|location=Sequence derived from alignment at ch6:3605104..3606666+ (Aspergillus niger KJC3)
ACCGGATAGCTTTCAAAATGGTTAATCATCTAAAGAAACAACAAAAGTCG
AAAGAAGCTTTTAAGAAAATTGCGGATGTGCCAGTAGTCCTCTTTATATC
CTCTAATGTTGAAGACAGGGGAAGATCCCCAATGGAGAAGTTGGAGACAT
TTTATTGCACTCTGGGCGATCGCTTTGGGCGAGATCGTGAGTTCTATTCA
ACTACCAAAGATGAGGATGGTATGACGCCGCATCATTACGCAGCACGGTT
ATTGCCAACGGGTTCCATTTCATGGGCGGAACATGAGGAGGAGCGGCAGA
AATGGAACTTGCTTCTAAAAGGCCTTAATCAGGATAACCTGAACGTGCAG
GATGAAGATGGTCGTACCCCATTCTCTCATGCGGCAGAGGTTGGAAGCGC
ATGGGTTGTGGATAAGCTGATCAAAACTGGAGCTGATCTCTACCAATGCG
ACCAAAACGGACGATCGCCCTTATCTTGGGCAGCGCAATCCGGAGAAAGA
GAATCGATGGAGATACTGAGTTGGAATGCCGGTGTCTTTGATGACAAGGA
AAACCGAGGCTGGACGCCCTGTCATTATTTTCTACAACGGGAGCCTGAGT
CAGCTGAGGATACGATTTCAGGATTCTTCCACTTATCTGGGACAGAAGCC
ATTCCCAAGAGGTCGGACACCTTGCCTGGCGCAAGGTGTTCTCGAGTATT
AGCGTGTCGACGCGAGTGGCAGCCGACTATATCAGCACGTCCTTGTTATC
TACGCCTACTGCTTCTGGCCTCACTTTGCTGTCGCGTGCTGTCCAGCTTG
ATAGAATTCTGATCGTCGCAACACTCCTCACCATCGAGGATATCGACATA
GGCGTGCCAGACGGGGATGGTAAAACGCCACTCTGGAGAGCGATAGAAGC
CGGAAATCGCGAAATCACCGAGTTACTATGGAACTATGATGATGTGACTT
TGAGGCTACTAGCAACGAGTGCTCAAGCCCGATCTGACCCGCTAGAATGG
GTTGTAAACAACAGGTATCCATTCACCAGACGGCATGGTCCAGATAACCA
GACAGCGTTTCATATAATGCTTGACATCCCTAATATTGGCGTTATGGAGC
ATCACCTCATACAATTCATAATTGCCCAAGTACCCAATTTGCCCACGGAC
ACCGTTGAAGCCCCAACATACGTGAGTTCAGAATTTCGAGAGGGAACCGA
CAGGCGTGGCTTAACCCCCCTCGCCTTGGCAAAAGAGAAACGACTGCTAC
CTATCGTGAAGCTTTTTCTTCGATGGCGTGCCGGAATTGATTGGTTGTGG
GAATTGCTTGATTGTATTCTGCGCTGGTGGTCAAATGCTCTGACTTAAGT
GGCTGCGGACATCGCCGTAATGGTCATGGCCATTGACGGTGAGAATATCA
CATCTGGTCAGCTCATTCATGATGTGTCTTTGTTGCTCAGACCAAGCTAA
GCGGTAATAATAGGCTTACGCGAGCGATTTGGTATTGTTGTTGTTCGGAG
GAAGATTGATTGTTCCTATTTCCGTCGACAACCTAATGGCTTTATATACA
AAACGGATATCAG
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Coding sequence (CDS) from alignment at ch6:3605104..3606666+

>KJC3_008967-T1 ID=KJC3_008967-T1|Name=KJC3_008967-T1|organism=Aspergillus niger KJC3|type=CDS|length=795bp|location=Sequence derived from alignment at ch6:3605104..3606666+ (Aspergillus niger KJC3)
ATGGTTAATCATCTAAAGAAACAACAAAAGTCGAAAGAAGCTTTTAAGAA
AATTGCGGATGTGCCAGTAGTCCTCTTTATATCCTCTAATGTTGAAGACA
GGGGAAGATCCCCAATGGAGAAGTTGGAGACATTTTATTGCACTCTGGGC
GATCGCTTTGGGCGAGATCGTGAGTTCTATTCAACTACCAAAGATGAGGA
TGGTATGACGCCGCATCATTACGCAGCACGGTTATTGCCAACGGGTTCCA
TTTCATGGGCGGAACATGAGGAGGAGCGGCAGAAATGGAACTTGCTTCTA
AAAGGCCTTAATCAGGATAACCTGAACGTGCAGGATGAAGATGGTCGTAC
CCCATTCTCTCATGCGGCAGAGGTTGGAAGCGCATGGGTTGTGGATAAGC
TGATCAAAACTGGAGCTGATCTCTACCAATGCGACCAAAACGGACGATCG
CCCTTATCTTGGGCAGCGCAATCCGGAGAAAGAGAATCGATGGAGATACT
GAGTTGGAATGCCGGTGTCTTTGATGACAAGGAAAACCGAGGCTGGACGC
CCTGTCATTATTTTCTACAACGGGAGCCTGAGTCAGCTGAGGATACGATT
TCAGGATTCTTCCACTTATCTGGGACAGAAGCCATTCCCAAGAGGTCGGA
CACCTTGCCTGGCGCAAGGTGTTCTCGAGTATTAGCGTGTCGACGCGAGT
GGCAGCCGACTATATCAGCACGTCCTTGTTATCTACGCCTACTGCTTCTG
GCCTCACTTTGCTGTCGCGTGCTGTCCAGCTTGATAGAATTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008967KJC3_008967Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008967-T1KJC3_008967-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008967-T1.utr5p1KJC3_008967-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008967-T1.exon1KJC3_008967-T1.exon1Aspergillus niger KJC3exon
KJC3_008967-T1.exon2KJC3_008967-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008967-T1.cdsKJC3_008967-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008967-T1.utr3p1KJC3_008967-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_008967-T1.utr3p2KJC3_008967-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR002110
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefPFAM:PF12796
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3605104..3606666 +
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