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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3674363..3676000+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008972-T1 ID=KJC3_008972-T1|Name=KJC3_008972-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1638bp|location=Sequence derived from alignment at ch6:3674363..3676000+ (Aspergillus niger KJC3)
GTCATGGCCTGTGATTACCAGGGCAACTGCTCCAACAGTAAGCATGATCA
GTTTTGGTCCTCCCGGCATCGCTGTGATCTGACAAACAGGCAAAAGTCGT
CGAGGGTCTCTCGAAAAGCGCAGAAATCCAACTAAACGATGACCATGCCA
TTTTCCATTATTCTGAAGACATCTTCTCTAGATTACCGTTGAATATCTTT
CAAATGATACAGGAGGCTTGGCTTAATGATGCAAAGATCAACCTTCACCA
TGAACGCCGCCTAGTTAGCGAAAGTGTGTTATGACCAACAGCTCAACTGT
GTTCCCATAGCTCACTACCAGATTCTCAGCACAAATCCGCCACTTAGTCG
GAATCCTACTTCGAAGTGATGCCAAATCTCCACGGTTTATACTTGACCAG
CTGAAAACGGACCACTTGTGGAGGTTTGGAAGAATGGTGGAGCATGTGCT
CGATATACGTGATAGACAGGATGCATACCATAACTGCCCCTCTGGTACGT
GACGATATTCTGGTTGTGATTCGCGGTAGGGCTCACATAGATGTCTGAAA
TAGACAGCAATACGACTATTCCAATCCGGCATCTGCACCTTCCTCTGGTC
ACCCCTGGCACACACACTTCTACGATTTCGGATCAGAGTATAGTCGACCT
TGGACAAACTATGCTGAGCGCTGCCCCGAGCTCGGATATGGATCAACCTA
ACCAATATTGCACCTTTTATAGCGAGCAATTTAGGAAACTCAGATTCTGG
TCACTGGAAATGACAGCCTGGGCGATTATAGAGTATATTGAGCCGACTAA
GGCTTCCACATATCCGTATGGAGGGAAAGGACCGGGGTGGTGGCCACCAT
ATGTGTCTCACCAACGTCCTCGATACCTCAAAAAAGAAGGTCAGTTCGAC
TGCCCGGCATTCGTTACCAGCTCTAACACGCCCAAAGGCACGATTAAGTT
ATTGCTTTTCTTGTTACGCGAGTTATACCAGCAGGGGCTTAGAATAATCC
ATTGGAAGGATGCTATGCGTTCAGTGTCACTTGATGATCAGAGTCATACA
ATACTCGAAGGGATATTCTATCTCCGTGAAATCGAGGAAAAGCAGCTTGA
GGAATGCTCTGGTGAGTACAGTAGCTTTGAGGCGATCCGTTTTATCATGG
AATATCCAGCTAAAGTTTAGTTGGTACAGGAAAAGCGCATCGAGACACTG
GTAGCGAGCATCCCAAGCAGAGTGCCAAAAAGAGACGGCTGACAGAGAGT
AGTCTTGTGTTCACTGACTACGTGTTACTCGCAATTGATGAAAGTGGAAA
GTACATTCGATCCAGTACCATTAGTTTTCGGGACGTGATAGACATCAATA
GTGAGAAGAAGTTCAAATTGGAAGTCATTAAAAATCGGATGCAGCAAAGT
AAGTACTATGGAGGGGTTTGAACGACGGCAGGGAAACTCACCATACTTAA
GGGCCCATACCCACACAGAAAGTGATGCAGCTTGCTCGAGAGTGCTCAGT
CTCAAACAAATATGTTCGCTTCTGTCCCGAAGAGAGCACAAATGCCAAAG
CACAATCCTATGGTAGGTGGCATGCAAGACCCGGATGAGGAGCACCTAAC
ATCTAGTACAGGGAAGCATGAGACGTCAAAGGAAGTAG back to topCoding sequence (CDS) from alignment at ch6:3674363..3676000+ >KJC3_008972-T1 ID=KJC3_008972-T1|Name=KJC3_008972-T1|organism=Aspergillus niger KJC3|type=CDS|length=9072bp|location=Sequence derived from alignment at ch6:3674363..3676000+ (Aspergillus niger KJC3)
ATGGCCTGTGATTACCAGGGCAACTGCTCCAACATCGTCGAGGGTCTCTC
GAAAAGCGCAGAAATCCAACTAAACGATGACCATGCCATTTTCCATTATT
CTGAAGACATCTTCTCTAGATTACCGTTGAATATCTTTCAAATGATACAG
GAGGCTTGGCTTAATGATGCAAAGATCAACCTTCACCATGAACGCCGCCT
AGTTAGCGAAACACAAATCCGCCACTTAGTCGGAATCCTACTTCGAAGTG
ATGCCAAATCTCCACGGTTTATACTTGACCAGCTGAAAACGGACCACTTG
TGGAGGTTTGGAAGAATGGTGGAGCATGTGCTCGATATACGTGATAGACA
GGATGCATACCATAACTGCCCCTCTGACAGCAATACGACTATTCCAATCC
GGCATCTGCACCTTCCTCTGGTCACCCCTGGCACACACACTTCTACGATT
TCGGATCAGAGTATAGTCGACCTTGGACAAACTATGCTGAGCGCTGCCCC
GAGCTCGGATATGGATCAACCTAACCAATATTGCACCTTTTATAGCGAGC
AATTTAGGAAACTCAGATTCTGGTCACTGGAAATGACAGCCTGGGCGATT
ATAGAGTATATTGAGCCGACTAAGGCTTCCACATATCCGTATGGAGGGAA
AGGACCGGGGTGGTGGCCACCATATGTGTCTCACCAACGTCCTCGATACC
TCAAAAAAGAAGGTCAGTTCGACTGCCCGGCATTCGTTACCAGCTCTAAC
ACGCCCAAAGGCACGATTAAGTTATTGCTTTTCTTGTTACGCGAGTTATA
CCAGCAGGGGCTTAGAATAATCCATTGGAAGGATGCTATGCGTTCAGTGT
CACTTGATGATCAGAGTCATACAATACTCGAAGGGATATTCTATCTCCGT
GAAATCGAGGAAAAGCAGCTTGAGGAATGCTCTGGAAAAGCGCATCGAGA
CACTGGTAGCGAGCATCCCAAGCAGAGTGCCAAAAAGAGACGGCTGACAG
AGAGTAGTCTTGTGTTCACTGACTACGTGTTACTCGCAATTGATGAAAGT
GGAAAGTACATTCGATCCAGTACCATTAGTTTTCGGGACGTGATAGACAT
CAATAGTGAGAAGAAGTTCAAATTGGAAGTCATTAAAAATCGGATGCAGC
AAAGGCCCATACCCACACAGAAAGTGATGCAGCTTGCTCGAGAGTGCTCA
GTCTCAAACAAATATGTTCGCTTCTGTCCCGAAGAGAGCACAAATGCCAA
AGCACAATCCTATGTACAGGGAAGCATGAGACGTCAAAGGAAGTAGATGG
CCTGTGATTACCAGGGCAACTGCTCCAACATCGTCGAGGGTCTCTCGAAA
AGCGCAGAAATCCAACTAAACGATGACCATGCCATTTTCCATTATTCTGA
AGACATCTTCTCTAGATTACCGTTGAATATCTTTCAAATGATACAGGAGG
CTTGGCTTAATGATGCAAAGATCAACCTTCACCATGAACGCCGCCTAGTT
AGCGAAACACAAATCCGCCACTTAGTCGGAATCCTACTTCGAAGTGATGC
CAAATCTCCACGGTTTATACTTGACCAGCTGAAAACGGACCACTTGTGGA
GGTTTGGAAGAATGGTGGAGCATGTGCTCGATATACGTGATAGACAGGAT
GCATACCATAACTGCCCCTCTGACAGCAATACGACTATTCCAATCCGGCA
TCTGCACCTTCCTCTGGTCACCCCTGGCACACACACTTCTACGATTTCGG
ATCAGAGTATAGTCGACCTTGGACAAACTATGCTGAGCGCTGCCCCGAGC
TCGGATATGGATCAACCTAACCAATATTGCACCTTTTATAGCGAGCAATT
TAGGAAACTCAGATTCTGGTCACTGGAAATGACAGCCTGGGCGATTATAG
AGTATATTGAGCCGACTAAGGCTTCCACATATCCGTATGGAGGGAAAGGA
CCGGGGTGGTGGCCACCATATGTGTCTCACCAACGTCCTCGATACCTCAA
AAAAGAAGGTCAGTTCGACTGCCCGGCATTCGTTACCAGCTCTAACACGC
CCAAAGGCACGATTAAGTTATTGCTTTTCTTGTTACGCGAGTTATACCAG
CAGGGGCTTAGAATAATCCATTGGAAGGATGCTATGCGTTCAGTGTCACT
TGATGATCAGAGTCATACAATACTCGAAGGGATATTCTATCTCCGTGAAA
TCGAGGAAAAGCAGCTTGAGGAATGCTCTGGAAAAGCGCATCGAGACACT
GGTAGCGAGCATCCCAAGCAGAGTGCCAAAAAGAGACGGCTGACAGAGAG
TAGTCTTGTGTTCACTGACTACGTGTTACTCGCAATTGATGAAAGTGGAA
AGTACATTCGATCCAGTACCATTAGTTTTCGGGACGTGATAGACATCAAT
AGTGAGAAGAAGTTCAAATTGGAAGTCATTAAAAATCGGATGCAGCAAAG
GCCCATACCCACACAGAAAGTGATGCAGCTTGCTCGAGAGTGCTCAGTCT
CAAACAAATATGTTCGCTTCTGTCCCGAAGAGAGCACAAATGCCAAAGCA
CAATCCTATGTACAGGGAAGCATGAGACGTCAAAGGAAGTAGATGGCCTG
TGATTACCAGGGCAACTGCTCCAACATCGTCGAGGGTCTCTCGAAAAGCG
CAGAAATCCAACTAAACGATGACCATGCCATTTTCCATTATTCTGAAGAC
ATCTTCTCTAGATTACCGTTGAATATCTTTCAAATGATACAGGAGGCTTG
GCTTAATGATGCAAAGATCAACCTTCACCATGAACGCCGCCTAGTTAGCG
AAACACAAATCCGCCACTTAGTCGGAATCCTACTTCGAAGTGATGCCAAA
TCTCCACGGTTTATACTTGACCAGCTGAAAACGGACCACTTGTGGAGGTT
TGGAAGAATGGTGGAGCATGTGCTCGATATACGTGATAGACAGGATGCAT
ACCATAACTGCCCCTCTGACAGCAATACGACTATTCCAATCCGGCATCTG
CACCTTCCTCTGGTCACCCCTGGCACACACACTTCTACGATTTCGGATCA
GAGTATAGTCGACCTTGGACAAACTATGCTGAGCGCTGCCCCGAGCTCGG
ATATGGATCAACCTAACCAATATTGCACCTTTTATAGCGAGCAATTTAGG
AAACTCAGATTCTGGTCACTGGAAATGACAGCCTGGGCGATTATAGAGTA
TATTGAGCCGACTAAGGCTTCCACATATCCGTATGGAGGGAAAGGACCGG
GGTGGTGGCCACCATATGTGTCTCACCAACGTCCTCGATACCTCAAAAAA
GAAGGTCAGTTCGACTGCCCGGCATTCGTTACCAGCTCTAACACGCCCAA
AGGCACGATTAAGTTATTGCTTTTCTTGTTACGCGAGTTATACCAGCAGG
GGCTTAGAATAATCCATTGGAAGGATGCTATGCGTTCAGTGTCACTTGAT
GATCAGAGTCATACAATACTCGAAGGGATATTCTATCTCCGTGAAATCGA
GGAAAAGCAGCTTGAGGAATGCTCTGGAAAAGCGCATCGAGACACTGGTA
GCGAGCATCCCAAGCAGAGTGCCAAAAAGAGACGGCTGACAGAGAGTAGT
CTTGTGTTCACTGACTACGTGTTACTCGCAATTGATGAAAGTGGAAAGTA
CATTCGATCCAGTACCATTAGTTTTCGGGACGTGATAGACATCAATAGTG
AGAAGAAGTTCAAATTGGAAGTCATTAAAAATCGGATGCAGCAAAGGCCC
ATACCCACACAGAAAGTGATGCAGCTTGCTCGAGAGTGCTCAGTCTCAAA
CAAATATGTTCGCTTCTGTCCCGAAGAGAGCACAAATGCCAAAGCACAAT
CCTATGTACAGGGAAGCATGAGACGTCAAAGGAAGTAGATGGCCTGTGAT
TACCAGGGCAACTGCTCCAACATCGTCGAGGGTCTCTCGAAAAGCGCAGA
AATCCAACTAAACGATGACCATGCCATTTTCCATTATTCTGAAGACATCT
TCTCTAGATTACCGTTGAATATCTTTCAAATGATACAGGAGGCTTGGCTT
AATGATGCAAAGATCAACCTTCACCATGAACGCCGCCTAGTTAGCGAAAC
ACAAATCCGCCACTTAGTCGGAATCCTACTTCGAAGTGATGCCAAATCTC
CACGGTTTATACTTGACCAGCTGAAAACGGACCACTTGTGGAGGTTTGGA
AGAATGGTGGAGCATGTGCTCGATATACGTGATAGACAGGATGCATACCA
TAACTGCCCCTCTGACAGCAATACGACTATTCCAATCCGGCATCTGCACC
TTCCTCTGGTCACCCCTGGCACACACACTTCTACGATTTCGGATCAGAGT
ATAGTCGACCTTGGACAAACTATGCTGAGCGCTGCCCCGAGCTCGGATAT
GGATCAACCTAACCAATATTGCACCTTTTATAGCGAGCAATTTAGGAAAC
TCAGATTCTGGTCACTGGAAATGACAGCCTGGGCGATTATAGAGTATATT
GAGCCGACTAAGGCTTCCACATATCCGTATGGAGGGAAAGGACCGGGGTG
GTGGCCACCATATGTGTCTCACCAACGTCCTCGATACCTCAAAAAAGAAG
GTCAGTTCGACTGCCCGGCATTCGTTACCAGCTCTAACACGCCCAAAGGC
ACGATTAAGTTATTGCTTTTCTTGTTACGCGAGTTATACCAGCAGGGGCT
TAGAATAATCCATTGGAAGGATGCTATGCGTTCAGTGTCACTTGATGATC
AGAGTCATACAATACTCGAAGGGATATTCTATCTCCGTGAAATCGAGGAA
AAGCAGCTTGAGGAATGCTCTGGAAAAGCGCATCGAGACACTGGTAGCGA
GCATCCCAAGCAGAGTGCCAAAAAGAGACGGCTGACAGAGAGTAGTCTTG
TGTTCACTGACTACGTGTTACTCGCAATTGATGAAAGTGGAAAGTACATT
CGATCCAGTACCATTAGTTTTCGGGACGTGATAGACATCAATAGTGAGAA
GAAGTTCAAATTGGAAGTCATTAAAAATCGGATGCAGCAAAGGCCCATAC
CCACACAGAAAGTGATGCAGCTTGCTCGAGAGTGCTCAGTCTCAAACAAA
TATGTTCGCTTCTGTCCCGAAGAGAGCACAAATGCCAAAGCACAATCCTA
TGTACAGGGAAGCATGAGACGTCAAAGGAAGTAGATGGCCTGTGATTACC
AGGGCAACTGCTCCAACATCGTCGAGGGTCTCTCGAAAAGCGCAGAAATC
CAACTAAACGATGACCATGCCATTTTCCATTATTCTGAAGACATCTTCTC
TAGATTACCGTTGAATATCTTTCAAATGATACAGGAGGCTTGGCTTAATG
ATGCAAAGATCAACCTTCACCATGAACGCCGCCTAGTTAGCGAAACACAA
ATCCGCCACTTAGTCGGAATCCTACTTCGAAGTGATGCCAAATCTCCACG
GTTTATACTTGACCAGCTGAAAACGGACCACTTGTGGAGGTTTGGAAGAA
TGGTGGAGCATGTGCTCGATATACGTGATAGACAGGATGCATACCATAAC
TGCCCCTCTGACAGCAATACGACTATTCCAATCCGGCATCTGCACCTTCC
TCTGGTCACCCCTGGCACACACACTTCTACGATTTCGGATCAGAGTATAG
TCGACCTTGGACAAACTATGCTGAGCGCTGCCCCGAGCTCGGATATGGAT
CAACCTAACCAATATTGCACCTTTTATAGCGAGCAATTTAGGAAACTCAG
ATTCTGGTCACTGGAAATGACAGCCTGGGCGATTATAGAGTATATTGAGC
CGACTAAGGCTTCCACATATCCGTATGGAGGGAAAGGACCGGGGTGGTGG
CCACCATATGTGTCTCACCAACGTCCTCGATACCTCAAAAAAGAAGGTCA
GTTCGACTGCCCGGCATTCGTTACCAGCTCTAACACGCCCAAAGGCACGA
TTAAGTTATTGCTTTTCTTGTTACGCGAGTTATACCAGCAGGGGCTTAGA
ATAATCCATTGGAAGGATGCTATGCGTTCAGTGTCACTTGATGATCAGAG
TCATACAATACTCGAAGGGATATTCTATCTCCGTGAAATCGAGGAAAAGC
AGCTTGAGGAATGCTCTGGAAAAGCGCATCGAGACACTGGTAGCGAGCAT
CCCAAGCAGAGTGCCAAAAAGAGACGGCTGACAGAGAGTAGTCTTGTGTT
CACTGACTACGTGTTACTCGCAATTGATGAAAGTGGAAAGTACATTCGAT
CCAGTACCATTAGTTTTCGGGACGTGATAGACATCAATAGTGAGAAGAAG
TTCAAATTGGAAGTCATTAAAAATCGGATGCAGCAAAGGCCCATACCCAC
ACAGAAAGTGATGCAGCTTGCTCGAGAGTGCTCAGTCTCAAACAAATATG
TTCGCTTCTGTCCCGAAGAGAGCACAAATGCCAAAGCACAATCCTATGTA
CAGGGAAGCATGAGACGTCAAAGGAAGTAGATGGCCTGTGATTACCAGGG
CAACTGCTCCAACATCGTCGAGGGTCTCTCGAAAAGCGCAGAAATCCAAC
TAAACGATGACCATGCCATTTTCCATTATTCTGAAGACATCTTCTCTAGA
TTACCGTTGAATATCTTTCAAATGATACAGGAGGCTTGGCTTAATGATGC
AAAGATCAACCTTCACCATGAACGCCGCCTAGTTAGCGAAACACAAATCC
GCCACTTAGTCGGAATCCTACTTCGAAGTGATGCCAAATCTCCACGGTTT
ATACTTGACCAGCTGAAAACGGACCACTTGTGGAGGTTTGGAAGAATGGT
GGAGCATGTGCTCGATATACGTGATAGACAGGATGCATACCATAACTGCC
CCTCTGACAGCAATACGACTATTCCAATCCGGCATCTGCACCTTCCTCTG
GTCACCCCTGGCACACACACTTCTACGATTTCGGATCAGAGTATAGTCGA
CCTTGGACAAACTATGCTGAGCGCTGCCCCGAGCTCGGATATGGATCAAC
CTAACCAATATTGCACCTTTTATAGCGAGCAATTTAGGAAACTCAGATTC
TGGTCACTGGAAATGACAGCCTGGGCGATTATAGAGTATATTGAGCCGAC
TAAGGCTTCCACATATCCGTATGGAGGGAAAGGACCGGGGTGGTGGCCAC
CATATGTGTCTCACCAACGTCCTCGATACCTCAAAAAAGAAGGTCAGTTC
GACTGCCCGGCATTCGTTACCAGCTCTAACACGCCCAAAGGCACGATTAA
GTTATTGCTTTTCTTGTTACGCGAGTTATACCAGCAGGGGCTTAGAATAA
TCCATTGGAAGGATGCTATGCGTTCAGTGTCACTTGATGATCAGAGTCAT
ACAATACTCGAAGGGATATTCTATCTCCGTGAAATCGAGGAAAAGCAGCT
TGAGGAATGCTCTGGAAAAGCGCATCGAGACACTGGTAGCGAGCATCCCA
AGCAGAGTGCCAAAAAGAGACGGCTGACAGAGAGTAGTCTTGTGTTCACT
GACTACGTGTTACTCGCAATTGATGAAAGTGGAAAGTACATTCGATCCAG
TACCATTAGTTTTCGGGACGTGATAGACATCAATAGTGAGAAGAAGTTCA
AATTGGAAGTCATTAAAAATCGGATGCAGCAAAGGCCCATACCCACACAG
AAAGTGATGCAGCTTGCTCGAGAGTGCTCAGTCTCAAACAAATATGTTCG
CTTCTGTCCCGAAGAGAGCACAAATGCCAAAGCACAATCCTATGTACAGG
GAAGCATGAGACGTCAAAGGAAGTAGATGGCCTGTGATTACCAGGGCAAC
TGCTCCAACATCGTCGAGGGTCTCTCGAAAAGCGCAGAAATCCAACTAAA
CGATGACCATGCCATTTTCCATTATTCTGAAGACATCTTCTCTAGATTAC
CGTTGAATATCTTTCAAATGATACAGGAGGCTTGGCTTAATGATGCAAAG
ATCAACCTTCACCATGAACGCCGCCTAGTTAGCGAAACACAAATCCGCCA
CTTAGTCGGAATCCTACTTCGAAGTGATGCCAAATCTCCACGGTTTATAC
TTGACCAGCTGAAAACGGACCACTTGTGGAGGTTTGGAAGAATGGTGGAG
CATGTGCTCGATATACGTGATAGACAGGATGCATACCATAACTGCCCCTC
TGACAGCAATACGACTATTCCAATCCGGCATCTGCACCTTCCTCTGGTCA
CCCCTGGCACACACACTTCTACGATTTCGGATCAGAGTATAGTCGACCTT
GGACAAACTATGCTGAGCGCTGCCCCGAGCTCGGATATGGATCAACCTAA
CCAATATTGCACCTTTTATAGCGAGCAATTTAGGAAACTCAGATTCTGGT
CACTGGAAATGACAGCCTGGGCGATTATAGAGTATATTGAGCCGACTAAG
GCTTCCACATATCCGTATGGAGGGAAAGGACCGGGGTGGTGGCCACCATA
TGTGTCTCACCAACGTCCTCGATACCTCAAAAAAGAAGGTCAGTTCGACT
GCCCGGCATTCGTTACCAGCTCTAACACGCCCAAAGGCACGATTAAGTTA
TTGCTTTTCTTGTTACGCGAGTTATACCAGCAGGGGCTTAGAATAATCCA
TTGGAAGGATGCTATGCGTTCAGTGTCACTTGATGATCAGAGTCATACAA
TACTCGAAGGGATATTCTATCTCCGTGAAATCGAGGAAAAGCAGCTTGAG
GAATGCTCTGGAAAAGCGCATCGAGACACTGGTAGCGAGCATCCCAAGCA
GAGTGCCAAAAAGAGACGGCTGACAGAGAGTAGTCTTGTGTTCACTGACT
ACGTGTTACTCGCAATTGATGAAAGTGGAAAGTACATTCGATCCAGTACC
ATTAGTTTTCGGGACGTGATAGACATCAATAGTGAGAAGAAGTTCAAATT
GGAAGTCATTAAAAATCGGATGCAGCAAAGGCCCATACCCACACAGAAAG
TGATGCAGCTTGCTCGAGAGTGCTCAGTCTCAAACAAATATGTTCGCTTC
TGTCCCGAAGAGAGCACAAATGCCAAAGCACAATCCTATGTACAGGGAAG
CATGAGACGTCAAAGGAAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008972-T1.utr5p1 | KJC3_008972-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021264 |
| DBxref | PFAM:PF11001 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3674363..3676000 + |
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