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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3721614..3722317- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008978-T1 ID=KJC3_008978-T1|Name=KJC3_008978-T1|organism=Aspergillus niger KJC3|type=mRNA|length=704bp|location=Sequence derived from alignment at ch6:3721614..3722317- (Aspergillus niger KJC3)
CGCAATTTGATTCCAAAACTATCCCCCGCACCATCACGTCCAATATTCCA
ACAATATGGGCATTTACACTCGGCTCCCTGAAAGCATCGACGAGGTCGAC
ATCATCATTGCCGCCGGTGTGTTGCCCCACCTCTCTGCTCCTCATAAGTT
TATACTAACGAGCTCTTTCTCTCTCTCGTTAGGCGGTACCGCGGGGTGCG
TCGTTGCTTCCAGGCTCGGCGATGCCGACCTCTCGCTGTCTATCCTCGTC
GTAGGGGGCGGACAGAACAATAAGGGCAACCACATGATTGCTTTCCCGCT
CCTTTTCCCAACTGCACTGCTTCCCACCAGTACCGCAACCCTGTTTCACA
AGGGGAATGCGGAGCCACAGTTTGACAACCGCGAAATGATCGTCCCAACC
GGTGGTGTTCTGGGCGGAGGTTCGTTAATCAACTTGATGATGTACAGTCG
TGCTCAACGGCTTAATTGGGACTCTTGGGCCACTTCCGGATGATCGACGG
ATGAAATGACCCTTTTCTTGAAAAGGTAGGTTATTGGATTGCTATCTTGT
GCTGCAGTGTTGACTAACCCACCTTTACTCGTTGTCGCTTGAGACGTATC
ATGGCCCTGGTTCTGATTCTGTTCATGGAAAAGATGGCTCTGTTGTTATG
CCTTAGGAACTATTCTGCTATGAGCATACTATAGATGAATATATTAATGC
CGCC back to topCoding sequence (CDS) from alignment at ch6:3721614..3722317- >KJC3_008978-T1 ID=KJC3_008978-T1|Name=KJC3_008978-T1|organism=Aspergillus niger KJC3|type=CDS|length=744bp|location=Sequence derived from alignment at ch6:3721614..3722317- (Aspergillus niger KJC3)
GCGGTACCGCGGGGTGCGTCGTTGCTTCCAGGCTCGGCGATGCCGACCTC
TCGCTGTCTATCCTCGTCGTAGGGGGCGGACAGAACAATAAGGGCAACCA
CATGATTGCTTTCCCGCTCCTTTTCCCAACTGCACTGCTTCCCACCAGTA
CCGCAACCCTGTTTCACAAGGGGAATGCGGAGCCACAGTTTGACAACCGC
GAAATGATCGTCCCAACCGGTGGTGTTCTGGGCGGAGGTTCGTTAATCAA
CTTGATGATGTACAGTCGTGCTCAACGGCTTAATTGGGACTCTTGGGCCA
CTTCCGGATGAATGGGCATTTACACTCGGCTCCCTGAAAGCATCGACGAG
GTCGACATCATCATTGCCGCCGGCGGTACCGCGGGGTGCGTCGTTGCTTC
CAGGCTCGGCGATGCCGACCTCTCGCTGTCTATCCTCGTCGTAGGGGGCG
GACAGAACAATAAGGGCAACCACATGATTGCTTTCCCGCTCCTTTTCCCA
ACTGCACTGCTTCCCACCAGTACCGCAACCCTGTTTCACAAGGGGAATGC
GGAGCCACAGTTTGACAACCGCGAAATGATCGTCCCAACCGGTGGTGTTC
TGGGCGGAGGTTCGTTAATCAACTTGATGATGTACAGTCGTGCTCAACGG
CTTAATTGGGACTCTTGGGCCACTTCCGGATGAATGGGCATTTACACTCG
GCTCCCTGAAAGCATCGACGAGGTCGACATCATCATTGCCGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008978-T1.utr5p1 | KJC3_008978-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000172 |
| DBxref | InterPro:IPR036188 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3721614..3722317 - |
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