|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3747403..3750288+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008980-T1 ID=KJC3_008980-T1|Name=KJC3_008980-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2886bp|location=Sequence derived from alignment at ch6:3747403..3750288+ (Aspergillus niger KJC3)
CCCACCCGGCGGTTCATGATACGAATCCAAATTACCAGCAACATGGGCGT
CGCTGAAAGCAAAGAGTTAGCGCAGAATATATTATATGCTTGCCAGCGTG
CAGAAAACGAGGGGAAAAATAAGCTAGATGAAAGCTCATTATGGAAAGAT
GAGGTATGTGCTATGCCAGTATGACTGGAGCCACGTCTCACGGCTTCAGG
CTATCTCGAAAGCGGTGCGAAACATATGCGAGTATATTCCTCAGAAACTA
CGTGGAACAGCCGGCCGTTCCAAGATCAGAAGAGCTGCTTTGTGCCCGAA
TCCCGAAATTATCGTTCCGAAAGCCGTACAAGACTTACAAGAGAAGCGCG
CAGTCCTATTTCCATCAAGAGAGACGACTCGGGACAAAAATGCTGCAGGA
GGGGCTCAAAATGAGCTTCAAGTCTCTCAACATCATGAACTCCATCCAGG
TGAATCTCTTAGTAGTCTATACGAACTGACAGTCTTTTACGAGGAGCAGC
AAGAGCTGAACAAGATCCGCCTCAGGCTACTTTGTGTTGCGTTTTACCGA
CTAAAACAGGCGGTCGAACCTATAAGCCAAGCTCGGAATTATAACACTGC
CTATTATCTGGCAGAAGCTATACGAAAATCTAGACCGGATGTTGATAATA
TCGATGTGATTCACAGAAGAGTCCGGGCCTGGGTTCAAAAAGGAGAAAGG
TACGAGCTAATCGCAGAGGATCTTGGTGGAATTGGTGTACTTTACATTCT
TCCCGAAAGAGGCGGTGAAAACTTGTAAGATGATTTCTCTCTCCCTTTAG
TTTCTTATCTTCTAATAGGCTCAATAGGTGGACGAAAGAGCTCCCGAAAT
CGAGGGAGAATGCGAACAGGATATGCGTAATAGAGCGCTTGAAGGAACAA
AACTTACCTAATAACGCAAGATATTTGCATGCGTCTGCAGAGGCAGAGGT
TGACCGTATTATGGGACCTCTTGAAAGTGCTTTGAAAGAAGAACTCCACT
ATGGAGTCACCCGGTCATCATGTTCAACTATAGCAGAGAGTCGGTCATCA
AGTCAATACCGAGAGAATTCCGACAAATCACCCATGCACACACATACTAT
AGCGGAAAACGCAGTCGCTGGTATGGGCATCTCGTTTGATTAGGTAATGG
TTACTGACGTATCTTCAAGATGGCCAGTACTTTCAGCCTCAAAGACCTTT
ACAGCCTGACCAGTTCGATCCCCATCGGAATTCCCAACCGATACAGATGC
CAAACCTCTCTCATCCTCAAGGAGGTCAACTCGATAATGGATCCCTCATG
TTCGATCCACGACAGGGTGCCCAACCCATCGTCCCATCAGACATTGGCCT
TCAGATCAATCAGCTTGATAACGGATCTCTCATGTTCGATCCGCGACAGG
GCGCCCAGCCCATTATCCCATCAGACATGTCTGGCCTCCAGGTCAATCAG
CTCGATAACGGATCCCTCAATATGTTTGATCCACGACAGGGTGCCCAACC
CATCGTCCCATCAGACATTGGCCTTCAGATCAATCAGCTTGATAACGGAT
CTCTCATGTTCGATCCGCGACAGGGTGCCCAACCCATCCTTCCCTCAAAT
ATCTCTGGTCAGGACGATCACCTCAATAATAGGTCCCATAAGATGCTCGA
TAACCGGCAGTGTACCCAATCCATCATTCCTTCAGACATCCCAATGGCAG
TGTCATAGTTAACAGGTACTCCAACACGATCCCTAGCAGATAACCCCACC
TTATTCTGTCAGATTCTGCACAAGGAAGCCAAAACAAGCGTGAAAATAAC
TCCTACGCTATTTAACCCAGGGTACCGCATTCTCAAGTTCAATCCCTGTA
AAACATTCACGGCCTCCTTAAGGAAACAGAAGCTCCTAGAGGCCCATTCC
TCAGCTATGTTCCTAAGCTCTGAATTGGTGCTCAGATGTATTTTGCTCCT
CTGGGGGTCAGCACATTCTTAGTAATCAATAGTATCATGATTTAGTGCCA
CGAGGCCCACAAGAATAAGTTATTATAAATACACAGTCGCTCCTAACAAG
TTTCGTCTCAACGCCTTATAAAGACGATAACAGTTGCGTTCGCGCTGAGC
CAAGGTTCATCCGTGTGATAGGTATAGAAACCTTCTTCCAGCGGTCTTCC
TGGCGGTATGGTAATGTTTCCGGACAGAGGCACCAGATACATTTGTTCCT
TGTCATTTCTAACCTGCTTTACCTTCGAAAAGTGAACCAGGTTATACACC
CAACCCTGTCTCCTAGTCAGTATAGTCGTTATTCGTAAAAGTCCAAGCTA
TAGTACCTCTCCGATTTTCATCTTCCTTGTTAGATGATAGATTCGGTCCG
CCAACAGTTGCCCTCCGTAACTTTTGTTACCCTCCTTGTCTTCAGATATG
ATGCTAGCTTTGACAGTAACATCCCCGTCTAGTTCGGCCGAGGTCTCTGG
TATCATATTCTTGATTTGGTTTCGAATATCTTCAGCATCGCGAGAAAGTT
GGTGAGAATTCATCTCGATGAATGTTCTGCGGTTGCCGGAAGAGTGTCTC
GTTACGATTATCGATTTTGCGCAAATACACTAAACGTGTTTGTTAGCAGA
TAATGATAGGGTAGAGTTCGCCGTATGTTATACTAATTAGCCCTCAGTAC
CTTAAAGACATTTGCTGCGCATTCTCCGGGTAGAAATAAGTCGCAAGTTT
GCCATAAAGGAGGGGCACTGGTAGTGGGGTACGCAGGCCTGGGACGCGAA
AGTTGGGCATAAAGTCAGGTGACCGCCTGGTGGGGCCCGAATCTTCAGAC
GGATTCTGTTGCAGTGCAGGATTGACTAAGCAGTAGGAAAGAGGCAGCGA
GGTAACTAGCGATCATCGCCTTGCTTGACCGGACCG back to topCoding sequence (CDS) from alignment at ch6:3747403..3750288+ >KJC3_008980-T1 ID=KJC3_008980-T1|Name=KJC3_008980-T1|organism=Aspergillus niger KJC3|type=CDS|length=6180bp|location=Sequence derived from alignment at ch6:3747403..3750288+ (Aspergillus niger KJC3)
ATGATACGAATCCAAATTACCAGCAACATGGGCGTCGCTGAAAGCAAAGA
GTTAGCGCAGAATATATTATATGCTTGCCAGCGTGCAGAAAACGAGGGGA
AAAATAAGCTAGATGAAAGCTCATTATGGAAAGATGAGGCTATCTCGAAA
GCGGTGCGAAACATATGCGAGTATATTCCTCAGAAACTACGTGGAACAGC
CGGCCGTTCCAAGATCAGAAGAGCTGCTTTGTGCCCGAATCCCGAAATTA
TCGTTCCGAAAGCCGTACAAGACTTACAAGAGAAGCGCGCAGTCCTATTT
CCATCAAGAGAGACGACTCGGGACAAAAATGCTGCAGGAGGGGCTCAAAA
TGAGCTTCAAGTCTCTCAACATCATGAACTCCATCCAGGTGAATCTCTTA
GTAGTCTATACGAACTGACAGTCTTTTACGAGGAGCAGCAAGAGCTGAAC
AAGATCCGCCTCAGGCTACTTTGTGTTGCGTTTTACCGACTAAAACAGGC
GGTCGAACCTATAAGCCAAGCTCGGAATTATAACACTGCCTATTATCTGG
CAGAAGCTATACGAAAATCTAGACCGGATGTTGATAATATCGATGTGATT
CACAGAAGAGTCCGGGCCTGGGTTCAAAAAGGAGAAAGGTACGAGCTAAT
CGCAGAGGATCTTGGTGGAATTGGTGTACTTTACATTCTTCCCGAAAGAG
GCGGTGAAAACTTGTGGACGAAAGAGCTCCCGAAATCGAGGGAGAATGCG
AACAGGATATGCGTAATAGAGCGCTTGAAGGAACAAAACTTACCTAATAA
CGCAAGATATTTGCATGCGTCTGCAGAGGCAGAGGTTGACCGTATTATGG
GACCTCTTGAAAGTGCTTTGAAAGAAGAACTCCACTATGGAGTCACCCGG
TCATCATGTTCAACTATAGCAGAGAGTCGGTCATCAAGTCAATACCGAGA
GAATTCCGACAAATCACCCATGCACACACATACTATAGCGGAAAACGCAG
TCGCTGATGGCCAGTACTTTCAGCCTCAAAGACCTTTACAGCCTGACCAG
TTCGATCCCCATCGGAATTCCCAACCGATACAGATGCCAAACCTCTCTCA
TCCTCAAGGAGGTCAACTCGATAATGGATCCCTCATGTTCGATCCACGAC
AGGGTGCCCAACCCATCGTCCCATCAGACATTGGCCTTCAGATCAATCAG
CTTGATAACGGATCTCTCATGTTCGATCCGCGACAGGGCGCCCAGCCCAT
TATCCCATCAGACATGTCTGGCCTCCAGGTCAATCAGCTCGATAACGGAT
CCCTCAATATGTTTGATCCACGACAGGGTGCCCAACCCATCGTCCCATCA
GACATTGGCCTTCAGATCAATCAGCTTGATAACGGATCTCTCATGTTCGA
TCCGCGACAGGGTGCCCAACCCATCCTTCCCTCAAATATCTCTGGTCAGG
ACGATCACCTCAATAATAGGTCCCATAAGATGCTCGATAACCGGCAGTGT
ACCCAATCCATCATTCCTTCAGACATCCCAATGGCAGTGTCATAGATGAT
ACGAATCCAAATTACCAGCAACATGGGCGTCGCTGAAAGCAAAGAGTTAG
CGCAGAATATATTATATGCTTGCCAGCGTGCAGAAAACGAGGGGAAAAAT
AAGCTAGATGAAAGCTCATTATGGAAAGATGAGGCTATCTCGAAAGCGGT
GCGAAACATATGCGAGTATATTCCTCAGAAACTACGTGGAACAGCCGGCC
GTTCCAAGATCAGAAGAGCTGCTTTGTGCCCGAATCCCGAAATTATCGTT
CCGAAAGCCGTACAAGACTTACAAGAGAAGCGCGCAGTCCTATTTCCATC
AAGAGAGACGACTCGGGACAAAAATGCTGCAGGAGGGGCTCAAAATGAGC
TTCAAGTCTCTCAACATCATGAACTCCATCCAGGTGAATCTCTTAGTAGT
CTATACGAACTGACAGTCTTTTACGAGGAGCAGCAAGAGCTGAACAAGAT
CCGCCTCAGGCTACTTTGTGTTGCGTTTTACCGACTAAAACAGGCGGTCG
AACCTATAAGCCAAGCTCGGAATTATAACACTGCCTATTATCTGGCAGAA
GCTATACGAAAATCTAGACCGGATGTTGATAATATCGATGTGATTCACAG
AAGAGTCCGGGCCTGGGTTCAAAAAGGAGAAAGGTACGAGCTAATCGCAG
AGGATCTTGGTGGAATTGGTGTACTTTACATTCTTCCCGAAAGAGGCGGT
GAAAACTTGTGGACGAAAGAGCTCCCGAAATCGAGGGAGAATGCGAACAG
GATATGCGTAATAGAGCGCTTGAAGGAACAAAACTTACCTAATAACGCAA
GATATTTGCATGCGTCTGCAGAGGCAGAGGTTGACCGTATTATGGGACCT
CTTGAAAGTGCTTTGAAAGAAGAACTCCACTATGGAGTCACCCGGTCATC
ATGTTCAACTATAGCAGAGAGTCGGTCATCAAGTCAATACCGAGAGAATT
CCGACAAATCACCCATGCACACACATACTATAGCGGAAAACGCAGTCGCT
GATGGCCAGTACTTTCAGCCTCAAAGACCTTTACAGCCTGACCAGTTCGA
TCCCCATCGGAATTCCCAACCGATACAGATGCCAAACCTCTCTCATCCTC
AAGGAGGTCAACTCGATAATGGATCCCTCATGTTCGATCCACGACAGGGT
GCCCAACCCATCGTCCCATCAGACATTGGCCTTCAGATCAATCAGCTTGA
TAACGGATCTCTCATGTTCGATCCGCGACAGGGCGCCCAGCCCATTATCC
CATCAGACATGTCTGGCCTCCAGGTCAATCAGCTCGATAACGGATCCCTC
AATATGTTTGATCCACGACAGGGTGCCCAACCCATCGTCCCATCAGACAT
TGGCCTTCAGATCAATCAGCTTGATAACGGATCTCTCATGTTCGATCCGC
GACAGGGTGCCCAACCCATCCTTCCCTCAAATATCTCTGGTCAGGACGAT
CACCTCAATAATAGGTCCCATAAGATGCTCGATAACCGGCAGTGTACCCA
ATCCATCATTCCTTCAGACATCCCAATGGCAGTGTCATAGATGATACGAA
TCCAAATTACCAGCAACATGGGCGTCGCTGAAAGCAAAGAGTTAGCGCAG
AATATATTATATGCTTGCCAGCGTGCAGAAAACGAGGGGAAAAATAAGCT
AGATGAAAGCTCATTATGGAAAGATGAGGCTATCTCGAAAGCGGTGCGAA
ACATATGCGAGTATATTCCTCAGAAACTACGTGGAACAGCCGGCCGTTCC
AAGATCAGAAGAGCTGCTTTGTGCCCGAATCCCGAAATTATCGTTCCGAA
AGCCGTACAAGACTTACAAGAGAAGCGCGCAGTCCTATTTCCATCAAGAG
AGACGACTCGGGACAAAAATGCTGCAGGAGGGGCTCAAAATGAGCTTCAA
GTCTCTCAACATCATGAACTCCATCCAGGTGAATCTCTTAGTAGTCTATA
CGAACTGACAGTCTTTTACGAGGAGCAGCAAGAGCTGAACAAGATCCGCC
TCAGGCTACTTTGTGTTGCGTTTTACCGACTAAAACAGGCGGTCGAACCT
ATAAGCCAAGCTCGGAATTATAACACTGCCTATTATCTGGCAGAAGCTAT
ACGAAAATCTAGACCGGATGTTGATAATATCGATGTGATTCACAGAAGAG
TCCGGGCCTGGGTTCAAAAAGGAGAAAGGTACGAGCTAATCGCAGAGGAT
CTTGGTGGAATTGGTGTACTTTACATTCTTCCCGAAAGAGGCGGTGAAAA
CTTGTGGACGAAAGAGCTCCCGAAATCGAGGGAGAATGCGAACAGGATAT
GCGTAATAGAGCGCTTGAAGGAACAAAACTTACCTAATAACGCAAGATAT
TTGCATGCGTCTGCAGAGGCAGAGGTTGACCGTATTATGGGACCTCTTGA
AAGTGCTTTGAAAGAAGAACTCCACTATGGAGTCACCCGGTCATCATGTT
CAACTATAGCAGAGAGTCGGTCATCAAGTCAATACCGAGAGAATTCCGAC
AAATCACCCATGCACACACATACTATAGCGGAAAACGCAGTCGCTGATGG
CCAGTACTTTCAGCCTCAAAGACCTTTACAGCCTGACCAGTTCGATCCCC
ATCGGAATTCCCAACCGATACAGATGCCAAACCTCTCTCATCCTCAAGGA
GGTCAACTCGATAATGGATCCCTCATGTTCGATCCACGACAGGGTGCCCA
ACCCATCGTCCCATCAGACATTGGCCTTCAGATCAATCAGCTTGATAACG
GATCTCTCATGTTCGATCCGCGACAGGGCGCCCAGCCCATTATCCCATCA
GACATGTCTGGCCTCCAGGTCAATCAGCTCGATAACGGATCCCTCAATAT
GTTTGATCCACGACAGGGTGCCCAACCCATCGTCCCATCAGACATTGGCC
TTCAGATCAATCAGCTTGATAACGGATCTCTCATGTTCGATCCGCGACAG
GGTGCCCAACCCATCCTTCCCTCAAATATCTCTGGTCAGGACGATCACCT
CAATAATAGGTCCCATAAGATGCTCGATAACCGGCAGTGTACCCAATCCA
TCATTCCTTCAGACATCCCAATGGCAGTGTCATAGATGATACGAATCCAA
ATTACCAGCAACATGGGCGTCGCTGAAAGCAAAGAGTTAGCGCAGAATAT
ATTATATGCTTGCCAGCGTGCAGAAAACGAGGGGAAAAATAAGCTAGATG
AAAGCTCATTATGGAAAGATGAGGCTATCTCGAAAGCGGTGCGAAACATA
TGCGAGTATATTCCTCAGAAACTACGTGGAACAGCCGGCCGTTCCAAGAT
CAGAAGAGCTGCTTTGTGCCCGAATCCCGAAATTATCGTTCCGAAAGCCG
TACAAGACTTACAAGAGAAGCGCGCAGTCCTATTTCCATCAAGAGAGACG
ACTCGGGACAAAAATGCTGCAGGAGGGGCTCAAAATGAGCTTCAAGTCTC
TCAACATCATGAACTCCATCCAGGTGAATCTCTTAGTAGTCTATACGAAC
TGACAGTCTTTTACGAGGAGCAGCAAGAGCTGAACAAGATCCGCCTCAGG
CTACTTTGTGTTGCGTTTTACCGACTAAAACAGGCGGTCGAACCTATAAG
CCAAGCTCGGAATTATAACACTGCCTATTATCTGGCAGAAGCTATACGAA
AATCTAGACCGGATGTTGATAATATCGATGTGATTCACAGAAGAGTCCGG
GCCTGGGTTCAAAAAGGAGAAAGGTACGAGCTAATCGCAGAGGATCTTGG
TGGAATTGGTGTACTTTACATTCTTCCCGAAAGAGGCGGTGAAAACTTGT
GGACGAAAGAGCTCCCGAAATCGAGGGAGAATGCGAACAGGATATGCGTA
ATAGAGCGCTTGAAGGAACAAAACTTACCTAATAACGCAAGATATTTGCA
TGCGTCTGCAGAGGCAGAGGTTGACCGTATTATGGGACCTCTTGAAAGTG
CTTTGAAAGAAGAACTCCACTATGGAGTCACCCGGTCATCATGTTCAACT
ATAGCAGAGAGTCGGTCATCAAGTCAATACCGAGAGAATTCCGACAAATC
ACCCATGCACACACATACTATAGCGGAAAACGCAGTCGCTGATGGCCAGT
ACTTTCAGCCTCAAAGACCTTTACAGCCTGACCAGTTCGATCCCCATCGG
AATTCCCAACCGATACAGATGCCAAACCTCTCTCATCCTCAAGGAGGTCA
ACTCGATAATGGATCCCTCATGTTCGATCCACGACAGGGTGCCCAACCCA
TCGTCCCATCAGACATTGGCCTTCAGATCAATCAGCTTGATAACGGATCT
CTCATGTTCGATCCGCGACAGGGCGCCCAGCCCATTATCCCATCAGACAT
GTCTGGCCTCCAGGTCAATCAGCTCGATAACGGATCCCTCAATATGTTTG
ATCCACGACAGGGTGCCCAACCCATCGTCCCATCAGACATTGGCCTTCAG
ATCAATCAGCTTGATAACGGATCTCTCATGTTCGATCCGCGACAGGGTGC
CCAACCCATCCTTCCCTCAAATATCTCTGGTCAGGACGATCACCTCAATA
ATAGGTCCCATAAGATGCTCGATAACCGGCAGTGTACCCAATCCATCATT
CCTTCAGACATCCCAATGGCAGTGTCATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008980-T1.utr5p1 | KJC3_008980-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008980-T1.utr3p1 | KJC3_008980-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3747403..3750288 + |
|
