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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3797864..3800351+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008985-T1 ID=KJC3_008985-T1|Name=KJC3_008985-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2488bp|location=Sequence derived from alignment at ch6:3797864..3800351+ (Aspergillus niger KJC3)
TGGCGGGCCTGTGTCGTACGATCTCCTCGGAGATAGCCCCTGACAGGAGT
GGTGGGCCTGTTTAGTATCATTCTCCTCCGGAGATAGCCCATGACAGGAG
TGGTGGGCCTGTTTAGTATCAATCTCCCCGGAGATAGCCCCTCACAGGAG
TGGTGGGCCTGTGTAGTATCATCCCCTTCATGGCCATGGCCCCATGTCTA
TTGCCGGTGCCCTGGACCGTTCCCAGATGAACAGGTTCTTTCTGTTCTTA
GGACCCTGTTCTGAGACACCCCAGCTATGGGCAGCCACCTCTACGCGGTG
CTGGGGACTAGTACTTGCCAGAGTATATCCACTCGTCATGACGCAAGGAA
GCCAAGGTCTGCTCGCGCCATGCCGCGGTTCTCACCAGCATTGGTGCAAT
ATCGTGCATCGCAAGTCAGAACGGACGTCAAGATCCGTCCATGCCCGCTG
CCAGTCATGTACTGTACAATAGTCAGCTTATTTTTTGTGGTACAATATAT
ATTCAGTGACAATAGACCCCATTTATAGTACAGTCGGTCTCGAAATTCCA
CTGACCTTGAAACACACAACAATTGTTTTCGTGCCCCACTGCCAAGAGTC
TAGCGGGGGAGTTATAGAGAGCCACCCGCTTGCAAATAGGGGTGGCCGGA
AAACTTGTACACTATCATACATGAAATGCTGATAAGACGGTATTGAATTA
TGCCCGTATGCTAATGGCTTATTAATTTGCACAACCCCACCACGAGAACG
GTCAACCATGGGAGACACCCATGGAAGTGCATGGAACCTCCCGCCCAGGC
ACCGTAGATCTCAGGGAGCCAGGAACGCCTGTTCCTGGCCCCTCGCAGAC
GGGCCATGTGGCATCAACTTCCCCTTTCTGGCAACCACGTACCTCTGCCT
TGTTGTAACTCATGCAGTCGATAAACGCACAGTACATTTTCAATTGTTTG
ATGTGACAAAATAAGACGGTCGTTTCATAGTCCTCTCCGCCTGCAGCTGT
TGTTTGCTAACCGTTGTTCGCCGGCGAACAACAGCTGCTGAGGCAGCGTA
GTGTGCGAGTTCTGACCCGATATTGCTAACCACAGGAGTCTCAATCACTA
AAGAGATGAGCTCGAGCTTATGCCCCGGAAATGATGACGACACATACCGA
AACGGATCGTGGCGATGCGATGAGTCGCCATGGTATGCACCCACTCCCGG
AAATTTCAGTCGTACCTCCTCGCCGTCAAGTCTTAGCCTTATCAACGCCA
ACTCTCCGTCCCCCTTTGAGTATCCAGCCCCTCAACCACGCGCCTCCCAC
ACAGATAAACTTCCGCTCCTCCAGTACGGAGACTGGGTTGAAGGGAAGAC
GTATGATGAGGACCCACCCACCTGTATTCACTATTGGATTGAATGGAAGG
TTACTCTCAACACAAAGACTGTGATCAAAGATACGGAACAAGATCTGGTT
CTTGCCCCTGGATTTTATTGGAGGCTGTTCCTCCAACCAAAGTTGAGAGA
GAAGCTATGCCTCAAATATCCACACAAAAAGATTGCATTGGATGACACGT
CCATTGTGGTGACGGTTCCTCGGCGTGACAAACTTACTCGACAGTTTGAT
AAAACAGATATTGACTGGCCTGATATCGAGAGACAGCTTCTCGAATGGGG
CCATCACTTCCTTGCCGGCAAGAAATTGAAACTCTTAATATCATTCAACT
ATGTAGATGACACTCAGGACTCTACAGCCAGTCGCAGAGCGACTGACAAA
CGAGGTGCATCTTCTGCCACCCAGGGTATGCTCCAGGATCTTGATCGGGA
GGTCAACACGGAGGAGGAACTAACCGGAGAGCCTGCGGCCTGGAGGCATG
TCTACATGGTAATGCGCTGCCCCGGGTCGTGTGAGTTAGGGCCGCACTGT
TGGCAGGATCCATACGGGAAGAAACATTATAAACTGTACAGAGATGAGCT
TTTGAGCCTGGTCCGGTACGTGAAGAGTGGGAAGAGATTAGAGTCCCATG
AAGACGTGCCTGGCATGATCCGTGAGCAAATCTATAGGGCTGAGAGGCGG
CGGCTTGAAGGGGCAAAGAGTCGTAGTCGCCTTCCATCAGAGTCAGCCTA
CCCGCCGATTACCATCACAAATGTGCTTCCCGCACACGCCACGCAGCCGG
GTATGTCATCGTCGCCACCCACACCGGAAGACGCATCCATCTGTTCCACC
AAGGCTTCGCGGCTTAAAATAGCAGGATTTCGTGACGCCAATGTCCTGGC
CTACTGTGACTGGCAACAGTCACAGGTTGCGAACGAGTCGTGGAAGGATG
AATTTCGCAAAGCATGTAATGTGGCTCTGGGTGATGGGTTAGACTTGGAC
CAAATTGAGGAGTTGAGTGATCCTGAATACTTCAAAAATCGCGGAGTAAA
ATGGGGTATTGCTCGTCGATTTGTGAGGGATATCAGATACTGGGTAGACA
ACTTTTATTGTTATGTGAATGGTGGGGAGTCAGATTGA back to topCoding sequence (CDS) from alignment at ch6:3797864..3800351+ >KJC3_008985-T1 ID=KJC3_008985-T1|Name=KJC3_008985-T1|organism=Aspergillus niger KJC3|type=CDS|length=1383bp|location=Sequence derived from alignment at ch6:3797864..3800351+ (Aspergillus niger KJC3)
ATGAGCTCGAGCTTATGCCCCGGAAATGATGACGACACATACCGAAACGG
ATCGTGGCGATGCGATGAGTCGCCATGGTATGCACCCACTCCCGGAAATT
TCAGTCGTACCTCCTCGCCGTCAAGTCTTAGCCTTATCAACGCCAACTCT
CCGTCCCCCTTTGAGTATCCAGCCCCTCAACCACGCGCCTCCCACACAGA
TAAACTTCCGCTCCTCCAGTACGGAGACTGGGTTGAAGGGAAGACGTATG
ATGAGGACCCACCCACCTGTATTCACTATTGGATTGAATGGAAGGTTACT
CTCAACACAAAGACTGTGATCAAAGATACGGAACAAGATCTGGTTCTTGC
CCCTGGATTTTATTGGAGGCTGTTCCTCCAACCAAAGTTGAGAGAGAAGC
TATGCCTCAAATATCCACACAAAAAGATTGCATTGGATGACACGTCCATT
GTGGTGACGGTTCCTCGGCGTGACAAACTTACTCGACAGTTTGATAAAAC
AGATATTGACTGGCCTGATATCGAGAGACAGCTTCTCGAATGGGGCCATC
ACTTCCTTGCCGGCAAGAAATTGAAACTCTTAATATCATTCAACTATGTA
GATGACACTCAGGACTCTACAGCCAGTCGCAGAGCGACTGACAAACGAGG
TGCATCTTCTGCCACCCAGGGTATGCTCCAGGATCTTGATCGGGAGGTCA
ACACGGAGGAGGAACTAACCGGAGAGCCTGCGGCCTGGAGGCATGTCTAC
ATGGTAATGCGCTGCCCCGGGTCGTGTGAGTTAGGGCCGCACTGTTGGCA
GGATCCATACGGGAAGAAACATTATAAACTGTACAGAGATGAGCTTTTGA
GCCTGGTCCGGTACGTGAAGAGTGGGAAGAGATTAGAGTCCCATGAAGAC
GTGCCTGGCATGATCCGTGAGCAAATCTATAGGGCTGAGAGGCGGCGGCT
TGAAGGGGCAAAGAGTCGTAGTCGCCTTCCATCAGAGTCAGCCTACCCGC
CGATTACCATCACAAATGTGCTTCCCGCACACGCCACGCAGCCGGGTATG
TCATCGTCGCCACCCACACCGGAAGACGCATCCATCTGTTCCACCAAGGC
TTCGCGGCTTAAAATAGCAGGATTTCGTGACGCCAATGTCCTGGCCTACT
GTGACTGGCAACAGTCACAGGTTGCGAACGAGTCGTGGAAGGATGAATTT
CGCAAAGCATGTAATGTGGCTCTGGGTGATGGGTTAGACTTGGACCAAAT
TGAGGAGTTGAGTGATCCTGAATACTTCAAAAATCGCGGAGTAAAATGGG
GTATTGCTCGTCGATTTGTGAGGGATATCAGATACTGGGTAGACAACTTT
TATTGTTATGTGAATGGTGGGGAGTCAGATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_008985-T1.utr5p1 | KJC3_008985-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3797864..3800351 + |
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