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KJC3_009019-T1, KJC3_009019-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009019-T1
Unique NameKJC3_009019-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3989604..3990736-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009019-T1 ID=KJC3_009019-T1|Name=KJC3_009019-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1133bp|location=Sequence derived from alignment at ch6:3989604..3990736- (Aspergillus niger KJC3)
TTTTACTAGTCAAATATCATGTACTATCCCTGAACATGACCGAACAGTCT
TCCGAATTCCAACATGACGAGGAACCTGCAGGTGGCGTCGGCGCCGGCAT
ATACAGATGGGTTAGGGGCAAGCAGTACGAGCGCTTTATGCTGCTCATCC
TCGAAGGCTGACGAGCGCCGAACGAATACTTAAAGACCACCCATCACTTC
CTCAGCTAGAGCGTCTCATTCTCTCTCCATAAACTGGTACACCCACAATC
AATAACTTCTTCCTAAGTTCATTTCCACCATGGCAGTCGCTGTAGCTTCT
CCCATCGTTATCCCTGGCCTTCATGCTCCTCCTACTATTAAGGACCTTTT
ACAGTCCTCTCGGGCGTAGGTTAACCTCAATGACTTGTAATAGACTGGCC
GTGCGCTAATCACACTGAAAAGTTACAATCTTCTACCAGACGATGGAGAC
CAGCCACAAGTGCAGAAGATTCACCTTCAGGAGCTTGCTAGACTCTTTGC
ACGTTTCAACGTCCAGAAAATATTTGGACTCCATCTCATCCACGGGCACT
TCCAAATGGAGGAAGACAAAATCATGCTGGGGACGCCCCTCAAATCCGTT
CGGGGATGCTGGACCCAGCCCACTTCTATCGCAGATATCAACCCGGCAGA
GATCCATGGTCACATCTTCAAGCTGACAGCCGGCGGCGAGATGCAAGCCT
ACGAGTATCGCCAAGGACCAACAGTTAGTCTGGATGATATCGATCCCATG
TTCTTCCAGGAACTGGTTAGATACCTTCAAACCCGTCACCTGATTGATCT
CCTCGGGCTTCAAGTCCTTACTAATGATGCGCCGGCGATGATGAGTGAGT
TTGTCCTCGCGAATAACGGCACCGTCATGTTGGATGAGAGAGATGTGAAA
AACTGTGGGACACCTTTCCGCATCACCGGGTTCTTTCTTGAAGAGCCAGA
CATGACTGAGTTCAAGGACGGAGAGACCCATGCACCAACTGTCAGGGGTA
CCCACCAAGTCTTTACCAGCGACAAGATCGAAACGGAGAACCAGCTTATG
GCTATCCTCCGAAGGGAGGACATTGTCTTTTGAGCGTATCTTTTAGCTAG
AGATAGGATCGAGATAGTTCAATATTGGGGGTG
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Coding sequence (CDS) from alignment at ch6:3989604..3990736-

>KJC3_009019-T1 ID=KJC3_009019-T1|Name=KJC3_009019-T1|organism=Aspergillus niger KJC3|type=CDS|length=1494bp|location=Sequence derived from alignment at ch6:3989604..3990736- (Aspergillus niger KJC3)
TTACAATCTTCTACCAGACGATGGAGACCAGCCACAAGTGCAGAAGATTC
ACCTTCAGGAGCTTGCTAGACTCTTTGCACGTTTCAACGTCCAGAAAATA
TTTGGACTCCATCTCATCCACGGGCACTTCCAAATGGAGGAAGACAAAAT
CATGCTGGGGACGCCCCTCAAATCCGTTCGGGGATGCTGGACCCAGCCCA
CTTCTATCGCAGATATCAACCCGGCAGAGATCCATGGTCACATCTTCAAG
CTGACAGCCGGCGGCGAGATGCAAGCCTACGAGTATCGCCAAGGACCAAC
AGTTAGTCTGGATGATATCGATCCCATGTTCTTCCAGGAACTGGTTAGAT
ACCTTCAAACCCGTCACCTGATTGATCTCCTCGGGCTTCAAGTCCTTACT
AATGATGCGCCGGCGATGATGAGTGAGTTTGTCCTCGCGAATAACGGCAC
CGTCATGTTGGATGAGAGAGATGTGAAAAACTGTGGGACACCTTTCCGCA
TCACCGGGTTCTTTCTTGAAGAGCCAGACATGACTGAGTTCAAGGACGGA
GAGACCCATGCACCAACTGTCAGGGGTACCCACCAAGTCTTTACCAGCGA
CAAGATCGAAACGGAGAACCAGCTTATGGCTATCCTCCGAAGGGAGGACA
TTGTCTTTTGAATGGCAGTCGCTGTAGCTTCTCCCATCGTTATCCCTGGC
CTTCATGCTCCTCCTACTATTAAGGACCTTTTACAGTCCTCTCGGGCTTA
CAATCTTCTACCAGACGATGGAGACCAGCCACAAGTGCAGAAGATTCACC
TTCAGGAGCTTGCTAGACTCTTTGCACGTTTCAACGTCCAGAAAATATTT
GGACTCCATCTCATCCACGGGCACTTCCAAATGGAGGAAGACAAAATCAT
GCTGGGGACGCCCCTCAAATCCGTTCGGGGATGCTGGACCCAGCCCACTT
CTATCGCAGATATCAACCCGGCAGAGATCCATGGTCACATCTTCAAGCTG
ACAGCCGGCGGCGAGATGCAAGCCTACGAGTATCGCCAAGGACCAACAGT
TAGTCTGGATGATATCGATCCCATGTTCTTCCAGGAACTGGTTAGATACC
TTCAAACCCGTCACCTGATTGATCTCCTCGGGCTTCAAGTCCTTACTAAT
GATGCGCCGGCGATGATGAGTGAGTTTGTCCTCGCGAATAACGGCACCGT
CATGTTGGATGAGAGAGATGTGAAAAACTGTGGGACACCTTTCCGCATCA
CCGGGTTCTTTCTTGAAGAGCCAGACATGACTGAGTTCAAGGACGGAGAG
ACCCATGCACCAACTGTCAGGGGTACCCACCAAGTCTTTACCAGCGACAA
GATCGAAACGGAGAACCAGCTTATGGCTATCCTCCGAAGGGAGGACATTG
TCTTTTGAATGGCAGTCGCTGTAGCTTCTCCCATCGTTATCCCTGGCCTT
CATGCTCCTCCTACTATTAAGGACCTTTTACAGTCCTCTCGGGC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009019KJC3_009019Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009019-T1KJC3_009019-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009019-T1.cdsKJC3_009019-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009019-T1.utr3p1KJC3_009019-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009019-T1.exon2KJC3_009019-T1.exon2Aspergillus niger KJC3exon
KJC3_009019-T1.exon1KJC3_009019-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009019-T1.utr5p1KJC3_009019-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3989604..3990736 -
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