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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3995243..3999703- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009022-T1 ID=KJC3_009022-T1|Name=KJC3_009022-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4461bp|location=Sequence derived from alignment at ch6:3995243..3999703- (Aspergillus niger KJC3)
CTGACGGATCGATGGCAGACCACAACTCGCCAGATTACAAGGCTCTCTTT
CTGCAGGCAGAGCAGAGACGCAAGCAAGAAGAAGAGAAGAGGAAGCAGGA
AGAAGAGAGAAGGAAGCACGCTGAAGATGAAGGAAGACGCGAGAAAGAGA
GGCGTGAGCTGGCCGAAGAGCGCACCCGTCGGACAACTTTCCTGGAATTC
CTACGCCACTGCCACAACCTACTCTCCCGACAGTTGAAAGTCGCAACCCC
GTCTCGCTCGACCACCGGGACGATACCCCTTCCGAAGGGCAAACATTGCC
CGACTCGACTGCGTCCATGGACGGATTGTGTCCGTCAACAGCAAGCCATC
TACGACAGGGTATGCACCTACCTACAATCCACTGATGAATCCCGAGCACA
ACTCTTCCCTCCCGTGATTGCGCTTGAAGAGCTGGCTAGGCGTTTCGCTC
TTCGACCTATCAGCAGTGAACAGGGCATCGAGACCTACGAGCGGATTGCC
GTGGAAGACCATGTGCGCGATATCATTTCAGAGCTGTGCAAGATCCCGGC
TGCTCGAGAAGAGTTCATGCTTGGCGATGGTATTTGGTTCGATAACCACA
CCAACGCGTTGACCGAAAGCCAGGCTGAATTAGACGCAAATCATCCTCCC
ATTTTACGCCGTCCGCGGCCCGATCAATTTTGCATTCATCGTGTGGACGG
CAGCACTAATTCTCTCCTCCTCACCGTTGAATATAAGCCACCGCATAAAC
TCTCCGTGGAGACCCTCCGGGCAGGACTGCGACCGATGGAATTGTGGGAG
GAGATGGTCAAATGCAACACAGTGCCTACGGACCCTGTGGAGAAACTTAA
ATATAATGCGGAGCGGCTGGTTGACTCAGCTATAGTCCAGGCATATGATG
TTATGATTGAAGAAGGTCGTGCGGATGCGATTTTGACGAACGGACTTGCT
CGTGTCCTCCTCCATGTACCATACGATGATCCGGCCACGTTGTTCTATCA
CTTTTGTGAACCTAACACCGAGATCGACGAAGAAGATTTGCAGAATCTAC
GGCAGCCGAAAACTTCCGTCGCTAGGGTGTTGTGCCATTGCTTACGAAGT
TTTCGTTCTCCCACGCGTGACCAAGAGTGGCGGAATTCTGCTCGATCGCA
GCTTCATGTCTGGGAAACCAGTTTCGACCATGCTCGCTCTTTGATTCCCG
ATGAAGAGCTACGGAAAACTCCTCCGCACTCCGAAAATATAACTTCAAGT
CCCGAGCTGACTTCCTCAGACTACCAACCGTCGTCTTCTCCACTCGAATC
GCCCACGGAAAGTGGTCGTCGAGTGCCCACAAGATCTCAAGCAAGATGTA
TGCCACTTAGTCCCCAACATCGTTCGCAGTCACCGGACTCGTCCGGCTCC
GACTCAAACCAAGCGACGGGGCGCAAACGCGGCTTCAGCCAAGTCACATC
TTCTCCGTCTGCCCAACGAGCAGCTCGTCAACGCGAGACTAGTAATAATC
AAGACAACCAGTTTCGCCACCGTGATGCGCAATTTTGCACCCAGCGATGT
TTACTTGGACTGCAGTCCGGTGGTGCTCTTGACGATCGCTGTCCAAATGT
GATGCTCCATCGTCGAAGCAAAGACGATCTCCAACATCGGATTACTTCGG
AAGATTTGATGCGTTTACTCAAAGCCCAATTGGACGAAAATATTGACCGG
TGCACGCCCCTTAGAGGTTGCGGGGCGTATGGTGCGCCATTCAAACTTAC
TTGTATCACATATGGCTATACTGTTGTCGGGAAAGGAACCACGTCTGGGC
TGTGGAAAGAAGTCTCCCGCGAAGCGGAGGTATACCGAATTCTGCAGAAA
GCGCAAGGGTCCGCTGTTCCTGTTTTCTTGGGTACGATCGACTTGGCGAA
AATTTATTTCCTTCACGGGGCTGGAGAGATTCGCCATATGCTCGTAATGG
CCTGGGGGGGAGAAAGTACGGCATCGATGGAACTGACGCCGAAGCTTCTG
CAGAGGATTCACCAATCGAACAAGGAAATCAGAGCTTTGGGAATCATCCA
TGAAGACCTTCGGCGTGACAATGTCCTGTGGAATGAAGAACTTGAGCGAG
CGTTAATTATCGACTTTCACCGCTCTACATTGAAATGCCGGCCGACTTTG
CAGCGGCCACGAGCCATAAAACGACGACTACGTCAACCAGAGATGGGTGA
TGCAAAACGTCTTCGTGTGACGTGAGGAGGGTGCTTATCTTAGTGGATTA
GCAATTCAATTATGCATGATAATGAAGCATGAAGCATTTCCGGCCTGCAT
CTGCGTGAATGTCTATCTATTATAATTATTGATGCCCGCATCTCCACTGC
GCCCGCTGATATACGATGCTATATGTGTTGACAATGACGAATTGATCATC
CAATTCTGGCTCTCGGACTTGACTTTATGTGATGCTATGAATGATATGAA
AACATTGATTCAACTATGAAGCTTCAGGACCGGTATTATGGACTGTCGTG
TACTAACCGAAAATATTGCGATAAACGCCCACCGCTCGACAACCTTGAGG
AACGAGACTATCCACATTCACTTTCCCAGGTATGCTGTTAAACATACATT
CCATCAGCAGGCCTCTCTCTACCAAACTCCTTCGAAAATTTCTTATTCGA
TTCGGCAGCTAACTCCAAGTATTTGTAGTTCACCTGGTTGATGTCAGCCT
CAGCGAGAGCATGTGCAATTGCCGCAATGTTTTTGATCTAGTCCACGATT
AGTCAGCAGGTGGGGCGTCCTGGCCAGCGTTTAGATACCTACCTCTCTTC
CATTCAGAGCTAGAGACTCCAATCGTCGGAGGTCGTGCTCCGCAACAAGC
GCTGGTCCTTGCATCGTACATGCCTTGGACAGAAAAGTCGACCAGAGATC
TCTGCGAAACTCTTTTGTCAAGTTTTTATACTCGATGATTAAATGGATCC
TGCTAAGAATTGCATCATCAAACTGAATACCCCGATTCGAGGTCAAGAAA
AGAATTCCCTGATAATACTCTAGCTTTCGCAGGAAAATTGTCACCAGTCG
ATTGTGGCTATCATGGAGCGCTGTACGACTTGCCATGAACGCATCCGCTT
CGTCTAACAGAAGTATAGCATTGAAGTGCTTTGCGATCTTGAAGATGACT
TCAAGCTGTGATTCAAGTGCGTTAGAATCTCCATGGTCGACAACAAGTTC
ACCTGCGGATATCTAAGAAAGTAAGTAAGGCCACAATCAGCGTGACAAAT
GGTTCATACCGAATAGAGGGGGAGCTGGAAATACTCTGAGGTTGCTTCAA
CCGTGAATGTCTTTCCGACGCCTGGTGGGCCACTAGCACGAGTTAGGCTC
CAAGTCACGGTATGGTATAGCCACTTGCTGACATACTTCAGAAGGATGTT
GAGTCCTTGCCCCTTTCCGTCAATCACGTCGTCGAATGGTACCGTCGGTA
TCAGGCCTAGGCGGGTTTTCGCCATCGACAAGAGGAGCGTCTTGTTCTCC
GAAGGGATTTGCAGGCAGTCGAACGATTCAGGTGACCAATCCACGTCCCT
CAGAGCACTGACTGCGCACTCCACTAGAATCACATTAGTCGGATGCCAAA
CATTGTCAGTCGTGTAACATACAAAACATTTTCTCCTTGAAGCTGAAACA
GCATACTGTTGGGCAGGCGATCAAGAAATCGGTCTCGCGCAGCTTTCGTG
CCTCCATACCGTCTCCTTGCATTCTCTCCTTCTCTCGCTCGCGGTCCTCC
ATGAGCATCGCACCGATGTCAATGAATGCAATGCCATTCTTGTCTTTTAC
TCCTATGTCGCGGAGTGACGGTCGGGAGTAGTTTGGCTGCATTTCATGGA
AAAATGCGGCATCCACTGCTACTTGGCTGTTGATGTTGATTTTGAAAATC
TTTCCCTTGTTCACAAAGAATGCACTGCCTTTACAGTGCTGAACGTGCGA
GCCAGCCAAATCCCGAAATCTTTGACCTCGCTCGACTAGGTCCTTTCGGA
CCTGCTCGTGGCTCGGATGGTGGCAGAGAGGGTAAGCCTCAAGAGTCGCG
GTCGGCTTTGACCCCCGGAACTTTGGCACACGCAGAAAGGTTCCGGCCTC
ACCGAACTTGACTCCGTCATAATCAAGAAATCGGCATTCGAGATTAAACC
ACGTCTCGTCATTCTGGGTTATTTCTTCCCCCGCATCGAATACGACACAT
CGCGGCTCTTTTGTGCCAATGCATGTGGTATAAACATGGCAACCGGGCTT
GAAAAGTGCCCAAAGAAGGTCATAAGTAATATGACCGTGCTGCAACATTG
ACGAGAGACGCTGCGAGACAGCTGCATATGCGCGCTTGAGGTGGTCGATG
AGCAAACGCAGATGCTGCGCCGCTGCCGATCTATGATCCGAACTGTTGTC
CATGTTCTCCGCGCATCTGTCGAGCTCTGAGAGGAAATGAAAAAGGACGT
TTTGCTCGATC back to topCoding sequence (CDS) from alignment at ch6:3995243..3999703- >KJC3_009022-T1 ID=KJC3_009022-T1|Name=KJC3_009022-T1|organism=Aspergillus niger KJC3|type=CDS|length=2214bp|location=Sequence derived from alignment at ch6:3995243..3999703- (Aspergillus niger KJC3)
ATGGCAGACCACAACTCGCCAGATTACAAGGCTCTCTTTCTGCAGGCAGA
GCAGAGACGCAAGCAAGAAGAAGAGAAGAGGAAGCAGGAAGAAGAGAGAA
GGAAGCACGCTGAAGATGAAGGAAGACGCGAGAAAGAGAGGCGTGAGCTG
GCCGAAGAGCGCACCCGTCGGACAACTTTCCTGGAATTCCTACGCCACTG
CCACAACCTACTCTCCCGACAGTTGAAAGTCGCAACCCCGTCTCGCTCGA
CCACCGGGACGATACCCCTTCCGAAGGGCAAACATTGCCCGACTCGACTG
CGTCCATGGACGGATTGTGTCCGTCAACAGCAAGCCATCTACGACAGGGT
ATGCACCTACCTACAATCCACTGATGAATCCCGAGCACAACTCTTCCCTC
CCGTGATTGCGCTTGAAGAGCTGGCTAGGCGTTTCGCTCTTCGACCTATC
AGCAGTGAACAGGGCATCGAGACCTACGAGCGGATTGCCGTGGAAGACCA
TGTGCGCGATATCATTTCAGAGCTGTGCAAGATCCCGGCTGCTCGAGAAG
AGTTCATGCTTGGCGATGGTATTTGGTTCGATAACCACACCAACGCGTTG
ACCGAAAGCCAGGCTGAATTAGACGCAAATCATCCTCCCATTTTACGCCG
TCCGCGGCCCGATCAATTTTGCATTCATCGTGTGGACGGCAGCACTAATT
CTCTCCTCCTCACCGTTGAATATAAGCCACCGCATAAACTCTCCGTGGAG
ACCCTCCGGGCAGGACTGCGACCGATGGAATTGTGGGAGGAGATGGTCAA
ATGCAACACAGTGCCTACGGACCCTGTGGAGAAACTTAAATATAATGCGG
AGCGGCTGGTTGACTCAGCTATAGTCCAGGCATATGATGTTATGATTGAA
GAAGGTCGTGCGGATGCGATTTTGACGAACGGACTTGCTCGTGTCCTCCT
CCATGTACCATACGATGATCCGGCCACGTTGTTCTATCACTTTTGTGAAC
CTAACACCGAGATCGACGAAGAAGATTTGCAGAATCTACGGCAGCCGAAA
ACTTCCGTCGCTAGGGTGTTGTGCCATTGCTTACGAAGTTTTCGTTCTCC
CACGCGTGACCAAGAGTGGCGGAATTCTGCTCGATCGCAGCTTCATGTCT
GGGAAACCAGTTTCGACCATGCTCGCTCTTTGATTCCCGATGAAGAGCTA
CGGAAAACTCCTCCGCACTCCGAAAATATAACTTCAAGTCCCGAGCTGAC
TTCCTCAGACTACCAACCGTCGTCTTCTCCACTCGAATCGCCCACGGAAA
GTGGTCGTCGAGTGCCCACAAGATCTCAAGCAAGATGTATGCCACTTAGT
CCCCAACATCGTTCGCAGTCACCGGACTCGTCCGGCTCCGACTCAAACCA
AGCGACGGGGCGCAAACGCGGCTTCAGCCAAGTCACATCTTCTCCGTCTG
CCCAACGAGCAGCTCGTCAACGCGAGACTAGTAATAATCAAGACAACCAG
TTTCGCCACCGTGATGCGCAATTTTGCACCCAGCGATGTTTACTTGGACT
GCAGTCCGGTGGTGCTCTTGACGATCGCTGTCCAAATGTGATGCTCCATC
GTCGAAGCAAAGACGATCTCCAACATCGGATTACTTCGGAAGATTTGATG
CGTTTACTCAAAGCCCAATTGGACGAAAATATTGACCGGTGCACGCCCCT
TAGAGGTTGCGGGGCGTATGGTGCGCCATTCAAACTTACTTGTATCACAT
ATGGCTATACTGTTGTCGGGAAAGGAACCACGTCTGGGCTGTGGAAAGAA
GTCTCCCGCGAAGCGGAGGTATACCGAATTCTGCAGAAAGCGCAAGGGTC
CGCTGTTCCTGTTTTCTTGGGTACGATCGACTTGGCGAAAATTTATTTCC
TTCACGGGGCTGGAGAGATTCGCCATATGCTCGTAATGGCCTGGGGGGGA
GAAAGTACGGCATCGATGGAACTGACGCCGAAGCTTCTGCAGAGGATTCA
CCAATCGAACAAGGAAATCAGAGCTTTGGGAATCATCCATGAAGACCTTC
GGCGTGACAATGTCCTGTGGAATGAAGAACTTGAGCGAGCGTTAATTATC
GACTTTCACCGCTCTACATTGAAATGCCGGCCGACTTTGCAGCGGCCACG
AGCCATAAAACGACGACTACGTCAACCAGAGATGGGTGATGCAAAACGTC
TTCGTGTGACGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009022-T1.utr5p1 | KJC3_009022-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:3995243..3999703 - |
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