|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4007156..4010144- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009025-T1 ID=KJC3_009025-T1|Name=KJC3_009025-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2989bp|location=Sequence derived from alignment at ch6:4007156..4010144- (Aspergillus niger KJC3)
GTTAGTGATTGTGCTGAATAATAAGGCGTAAAAAGAGCCTCAAATAAAAT
CATCTACTCCATACCTCCAATAGGATTGCGACACGACACTTCCACAACAC
TATGCGGGACTTATCTGCATGTTACGTGGCAATAACATTTTGGTCTACGT
AGCAATCATGATTGACGACCCCGCAAATTTCTTGCATGAACAGCCAAAGA
AGACGTGACGCATCAGCCTATCATTTCCACGAAGTGGAACGCCTAAAACA
TTTATGAATAGGACTTCATAGTTTTTTTCAAATGAGCAACGCTCCTCTAT
AGGTGCATTCGGTGAGATAAGGGAACGTTTGGACTTAGATGGCTGAATGG
TAGATAGCACTTTCTCCGTGAAGCTTTAGATCGAGACCCATACAGGTGCT
CCATAATTTAAGACTTATCTTCAGCAACTGACAGTTTTACATATTTCCCA
GCCAATCAACGGAGATCGGAGCGTCTTGCTCTGCAACATTGACGCAACCA
GAATTCCGCCGTGGTTGAAACTATGAGCGGATTTGCCGCCTCAGCCTCAA
GACCAGGAAGGAACTTGGGGTCCTTTATGCAAATTGACCAGGTTCAATTG
GAGCCACAATGATTACTCTAAATGGCTTTGGCCCTTTTTTCCCCCAAAGT
GTGGATGCTTTCCGACTTGGGTCCTGTATACTCTGCGGGAGAGGAGGCGC
CTCAACAAGGCGTGTCATCCTGTGGGTCGTGCGGGCACCCGCAGAGGCTA
TAACACGTTTCCAAGAGACTATGCCTTGCAGGAACATGAAGCAGCTCATC
TGCGGTTCTGCCGTGGGCTCATGTTATGACAGGACAGATGTTCATATGCC
GAATTTAGAAGGGAGTTCTATGCAACTTCTCAAGTTCACCTTGTCCGCCT
TGACTGGTTTCCTTTGCATCGTGTAGGGCGAGCTATAGGAAGAGAACAGG
AAAGGCAAGGTAAAAGCTAGTTGGATATTGGAAAAATTATAAATTCGAGC
TCGATCCCTCAGAAAATTCTTATCTCAGAGCGGAGGGCATCTTTTTGGCC
ACCTTGATCTATATTCACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCACCATGTCTTTGGAAAGCAAAGTCCAAGTTCTTCCACAGCAGGATAGA
ATTTCACCGAGTGACCATATGAAGAATGCTGTGGAGCAAATAGTCCTACT
CGCCGCTAGACCCGAGCTACAGAGCACTGCTAGTATTTTCGATGAAATTA
ATCGTCACCAGGCAGAAATAAAAGCCAAGGAAGCAGAGCTCGTCAAAGCC
CAAAATGATCTCAAGGCCAGAGAAGGCAAGACAGAAGACGCTGTCGAAAT
GATGTTTACTGCAAATGAAAAGCTCAAGGTCAGGTTAAGAGGTATCGAAA
AGGAGAATGGGTCACTGCTCAAGACCCTTGAAGACAGGGATAAGGATCTT
AACGAGCGTGCTGAGCAGATTAGCGGACTCGAAAGCGACCTGAAGAATCT
ACAGGCTAGCCATACCCAAGAAATTAAGAAAGCTGCACAATTATGTCGCG
ATATTTCCTCTCCTCAGGAAAACATCAAGGAGAAAGAAAAGATAATCGAC
AAAATGAAGGCTGCTGGCTCGAATCTGAAGACATTACTATCTGACGAACA
AAAGAAGAGTGCGCAACTTGAGAACGAGAGAAGATTACTCCAGGCAGAAG
GGCAGAAGACTTTGGAACAGCTCCGAAAGCTGGAGAGTTTCGTCGTACGC
GATAGTGAAGCTGACGAAGATTTAATGTAAGTTGCCACTTGATAGTTCAG
ACAATGTATTTGACCATCATATACTAGGATGGATGAATTTTCAAATCTTT
GGGATTATGCCACTTCTGAGGTCGCCCAAATCTTGACTCAAAACCTCAGT
GTTGAGACTCTCAATGTGAGTGCCCATATTACTGTACCTCTTATTGCGAG
CTGCGACTAACATCACCCGGAGAATAAAATGCGTTGGGATAAATTTCAAA
GGGACACCGAGCTCGCAGTCCGGCATCATGTCCCTTTACTTGCTTCTGAC
TCTCCTGCTGCCAAGGGAATGAGATTGGCTGTCATACTTGCAATTCTAGC
CCGGGAAATTGACAAGCATATCTTCCAACCAAATTATCTTTTCTCGGACA
CAGAATTCAGGACGATTCTATGTAACCTCGCTGCAGTTGACGGCGAGAAA
GAGTCGTTCTGTAGGTCCATGTTACTTTCCATCGATCACAGCGTCCAACA
AACATCTATCCAGTCTAGGATACAAACCGTGGTCCGCAACGTGTCAAACC
ATTTATTCGATATGCTGTCAGAAGCCCAATTTAGCGAGTTTCGACAGAGC
ATAGAAAAGGTCGCGAAGAGGGCTGTTGATGCTTGGCGTCCCATCCAGCA
TGCTAGCAAGAAGTACGAGCCAGATTTTGAACCCCTCAAGTGGGACGATA
ATGATTGGTCTCTGTTTCAATTTCCAGGAGACAATGATGATCAAACCGAA
GTGGCTAACAGCCACCAAGGCCGCAACCTTCTCACCATCTTCCCACGCAT
CTCTTGGGTGAACAATGATAAGCGCCATCCTCAAACCTTTGCTATCCAGC
TCATGGGATCGCAAAAGCAGTGTTTAGTCGCAGAACAGGAGAGAGATCGA
CAGACTCCTAGTCCCAAGATCAATCGAACGGCATCCAAGGGATCGAGGAG
AGCTTCCATTGCCCAAGGAGCGGCTCGCCCAAATGGTGAACATTTTTTAG
GGTAATTGTGAATCGGTGCACGAAGTACTGGAGAAGTACATCCTAATCAC
AACCTACAAAGTTGCCGCCTTTGAGATTTCGGGTATATTTTTAGCCATAT
TTTTAGCCTCATGATTGCCGCGTATTTCTTTCTTATGACAGTGAAATTTT
AAGCCATGCATTCTAAGCGAGATAAGGTGATCAGCAAGCTAAATCAGTAA
TGGCTAGCATAAAGCCCAGCATACTGCCTCTCATCGGGC back to topCoding sequence (CDS) from alignment at ch6:4007156..4010144- >KJC3_009025-T1 ID=KJC3_009025-T1|Name=KJC3_009025-T1|organism=Aspergillus niger KJC3|type=CDS|length=4626bp|location=Sequence derived from alignment at ch6:4007156..4010144- (Aspergillus niger KJC3)
AATAAAATGCGTTGGGATAAATTTCAAAGGGACACCGAGCTCGCAGTCCG
GCATCATGTCCCTTTACTTGCTTCTGACTCTCCTGCTGCCAAGGGAATGA
GATTGGCTGTCATACTTGCAATTCTAGCCCGGGAAATTGACAAGCATATC
TTCCAACCAAATTATCTTTTCTCGGACACAGAATTCAGGACGATTCTATG
TAACCTCGCTGCAGTTGACGGCGAGAAAGAGTCGTTCTGTAGGTCCATGT
TACTTTCCATCGATCACAGCGTCCAACAAACATCTATCCAGTCTAGGATA
CAAACCGTGGTCCGCAACGTGTCAAACCATTTATTCGATATGCTGTCAGA
AGCCCAATTTAGCGAGTTTCGACAGAGCATAGAAAAGGTCGCGAAGAGGG
CTGTTGATGCTTGGCGTCCCATCCAGCATGCTAGCAAGAAGTACGAGCCA
GATTTTGAACCCCTCAAGTGGGACGATAATGATTGGTCTCTGTTTCAATT
TCCAGGAGACAATGATGATCAAACCGAAGTGGCTAACAGCCACCAAGGCC
GCAACCTTCTCACCATCTTCCCACGCATCTCTTGGGTGAACAATGATAAG
CGCCATCCTCAAACCTTTGCTATCCAGCTCATGGGATCGCAAAAGCAGTG
TTTAGTCGCAGAACAGGAGAGAGATCGACAGACTCCTAGTCCCAAGATCA
ATCGAACGGCATCCAAGGGATCGAGGAGAGCTTCCATTGCCCAAGGAGCG
GCTCGCCCAAATGGTGAACATTTTTTAGGGTAAGATGGATGAATTTTCAA
ATCTTTGGGATTATGCCACTTCTGAGGTCGCCCAAATCTTGACTCAAAAC
CTCAGTGTTGAGACTCTCAATATGTCTTTGGAAAGCAAAGTCCAAGTTCT
TCCACAGCAGGATAGAATTTCACCGAGTGACCATATGAAGAATGCTGTGG
AGCAAATAGTCCTACTCGCCGCTAGACCCGAGCTACAGAGCACTGCTAGT
ATTTTCGATGAAATTAATCGTCACCAGGCAGAAATAAAAGCCAAGGAAGC
AGAGCTCGTCAAAGCCCAAAATGATCTCAAGGCCAGAGAAGGCAAGACAG
AAGACGCTGTCGAAATGATGTTTACTGCAAATGAAAAGCTCAAGGTCAGG
TTAAGAGGTATCGAAAAGGAGAATGGGTCACTGCTCAAGACCCTTGAAGA
CAGGGATAAGGATCTTAACGAGCGTGCTGAGCAGATTAGCGGACTCGAAA
GCGACCTGAAGAATCTACAGGCTAGCCATACCCAAGAAATTAAGAAAGCT
GCACAATTATGTCGCGATATTTCCTCTCCTCAGGAAAACATCAAGGAGAA
AGAAAAGATAATCGACAAAATGAAGGCTGCTGGCTCGAATCTGAAGACAT
TACTATCTGACGAACAAAAGAAGAGTGCGCAACTTGAGAACGAGAGAAGA
TTACTCCAGGCAGAAGGGCAGAAGACTTTGGAACAGCTCCGAAAGCTGGA
GAGTTTCGTCGTACGCGATAGTGAAGCTGACGAAGATTTAATAATAAAAT
GCGTTGGGATAAATTTCAAAGGGACACCGAGCTCGCAGTCCGGCATCATG
TCCCTTTACTTGCTTCTGACTCTCCTGCTGCCAAGGGAATGAGATTGGCT
GTCATACTTGCAATTCTAGCCCGGGAAATTGACAAGCATATCTTCCAACC
AAATTATCTTTTCTCGGACACAGAATTCAGGACGATTCTATGTAACCTCG
CTGCAGTTGACGGCGAGAAAGAGTCGTTCTGTAGGTCCATGTTACTTTCC
ATCGATCACAGCGTCCAACAAACATCTATCCAGTCTAGGATACAAACCGT
GGTCCGCAACGTGTCAAACCATTTATTCGATATGCTGTCAGAAGCCCAAT
TTAGCGAGTTTCGACAGAGCATAGAAAAGGTCGCGAAGAGGGCTGTTGAT
GCTTGGCGTCCCATCCAGCATGCTAGCAAGAAGTACGAGCCAGATTTTGA
ACCCCTCAAGTGGGACGATAATGATTGGTCTCTGTTTCAATTTCCAGGAG
ACAATGATGATCAAACCGAAGTGGCTAACAGCCACCAAGGCCGCAACCTT
CTCACCATCTTCCCACGCATCTCTTGGGTGAACAATGATAAGCGCCATCC
TCAAACCTTTGCTATCCAGCTCATGGGATCGCAAAAGCAGTGTTTAGTCG
CAGAACAGGAGAGAGATCGACAGACTCCTAGTCCCAAGATCAATCGAACG
GCATCCAAGGGATCGAGGAGAGCTTCCATTGCCCAAGGAGCGGCTCGCCC
AAATGGTGAACATTTTTTAGGGTAAGATGGATGAATTTTCAAATCTTTGG
GATTATGCCACTTCTGAGGTCGCCCAAATCTTGACTCAAAACCTCAGTGT
TGAGACTCTCAATATGTCTTTGGAAAGCAAAGTCCAAGTTCTTCCACAGC
AGGATAGAATTTCACCGAGTGACCATATGAAGAATGCTGTGGAGCAAATA
GTCCTACTCGCCGCTAGACCCGAGCTACAGAGCACTGCTAGTATTTTCGA
TGAAATTAATCGTCACCAGGCAGAAATAAAAGCCAAGGAAGCAGAGCTCG
TCAAAGCCCAAAATGATCTCAAGGCCAGAGAAGGCAAGACAGAAGACGCT
GTCGAAATGATGTTTACTGCAAATGAAAAGCTCAAGGTCAGGTTAAGAGG
TATCGAAAAGGAGAATGGGTCACTGCTCAAGACCCTTGAAGACAGGGATA
AGGATCTTAACGAGCGTGCTGAGCAGATTAGCGGACTCGAAAGCGACCTG
AAGAATCTACAGGCTAGCCATACCCAAGAAATTAAGAAAGCTGCACAATT
ATGTCGCGATATTTCCTCTCCTCAGGAAAACATCAAGGAGAAAGAAAAGA
TAATCGACAAAATGAAGGCTGCTGGCTCGAATCTGAAGACATTACTATCT
GACGAACAAAAGAAGAGTGCGCAACTTGAGAACGAGAGAAGATTACTCCA
GGCAGAAGGGCAGAAGACTTTGGAACAGCTCCGAAAGCTGGAGAGTTTCG
TCGTACGCGATAGTGAAGCTGACGAAGATTTAATAATAAAATGCGTTGGG
ATAAATTTCAAAGGGACACCGAGCTCGCAGTCCGGCATCATGTCCCTTTA
CTTGCTTCTGACTCTCCTGCTGCCAAGGGAATGAGATTGGCTGTCATACT
TGCAATTCTAGCCCGGGAAATTGACAAGCATATCTTCCAACCAAATTATC
TTTTCTCGGACACAGAATTCAGGACGATTCTATGTAACCTCGCTGCAGTT
GACGGCGAGAAAGAGTCGTTCTGTAGGTCCATGTTACTTTCCATCGATCA
CAGCGTCCAACAAACATCTATCCAGTCTAGGATACAAACCGTGGTCCGCA
ACGTGTCAAACCATTTATTCGATATGCTGTCAGAAGCCCAATTTAGCGAG
TTTCGACAGAGCATAGAAAAGGTCGCGAAGAGGGCTGTTGATGCTTGGCG
TCCCATCCAGCATGCTAGCAAGAAGTACGAGCCAGATTTTGAACCCCTCA
AGTGGGACGATAATGATTGGTCTCTGTTTCAATTTCCAGGAGACAATGAT
GATCAAACCGAAGTGGCTAACAGCCACCAAGGCCGCAACCTTCTCACCAT
CTTCCCACGCATCTCTTGGGTGAACAATGATAAGCGCCATCCTCAAACCT
TTGCTATCCAGCTCATGGGATCGCAAAAGCAGTGTTTAGTCGCAGAACAG
GAGAGAGATCGACAGACTCCTAGTCCCAAGATCAATCGAACGGCATCCAA
GGGATCGAGGAGAGCTTCCATTGCCCAAGGAGCGGCTCGCCCAAATGGTG
AACATTTTTTAGGGTAAGATGGATGAATTTTCAAATCTTTGGGATTATGC
CACTTCTGAGGTCGCCCAAATCTTGACTCAAAACCTCAGTGTTGAGACTC
TCAATATGTCTTTGGAAAGCAAAGTCCAAGTTCTTCCACAGCAGGATAGA
ATTTCACCGAGTGACCATATGAAGAATGCTGTGGAGCAAATAGTCCTACT
CGCCGCTAGACCCGAGCTACAGAGCACTGCTAGTATTTTCGATGAAATTA
ATCGTCACCAGGCAGAAATAAAAGCCAAGGAAGCAGAGCTCGTCAAAGCC
CAAAATGATCTCAAGGCCAGAGAAGGCAAGACAGAAGACGCTGTCGAAAT
GATGTTTACTGCAAATGAAAAGCTCAAGGTCAGGTTAAGAGGTATCGAAA
AGGAGAATGGGTCACTGCTCAAGACCCTTGAAGACAGGGATAAGGATCTT
AACGAGCGTGCTGAGCAGATTAGCGGACTCGAAAGCGACCTGAAGAATCT
ACAGGCTAGCCATACCCAAGAAATTAAGAAAGCTGCACAATTATGTCGCG
ATATTTCCTCTCCTCAGGAAAACATCAAGGAGAAAGAAAAGATAATCGAC
AAAATGAAGGCTGCTGGCTCGAATCTGAAGACATTACTATCTGACGAACA
AAAGAAGAGTGCGCAACTTGAGAACGAGAGAAGATTACTCCAGGCAGAAG
GGCAGAAGACTTTGGAACAGCTCCGAAAGCTGGAGAGTTTCGTCGTACGC
GATAGTGAAGCTGACGAAGATTTAAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009025-T1.utr3p1 | KJC3_009025-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4007156..4010144 - |
|
