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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4012223..4014871- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009026-T1 ID=KJC3_009026-T1|Name=KJC3_009026-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2649bp|location=Sequence derived from alignment at ch6:4012223..4014871- (Aspergillus niger KJC3)
CCGTTTAATAATGATCTCCGCCATTTTTGTCTTTTATATGTTTTCTTTCT
TCCTTGGCGAGCCGCCTACAGACGTATTCAAGATACAGAACCATTCAACC
CACTTCGCGACTTGCGTTGGTACTTTGACAGCGATCTTCAACGAGTTCTT
GGTAATCAAGCCCTTTTTTGGTGCAGGGTTTTGTCACTATCTTGGTATTG
CCTTGGGTCATCATGTTCGTGCTCTGGAAAGTGCATCGTCGGACCATCGT
CATTATAGGCTAGTGTGGTTTCGAGACTCTCTATTCCTGAGAGCTACGAG
CACTCTGGAAACCGAAATCATGGCTCCCGGGAACAAGCAACTAACGATCA
AGTTGACAGATTTGGAGACAGAAAAAGGCACTTCAACGCTGGGCCAACGT
TTACATAGGTCGACTCAAGAACATGATGACGGGTGGTCAGGCAAAACTTA
AAATGGGTGTTGGGATGGTGGTCTTTAAATGTGATTGGACAGTGTATAAG
TGGGGGTTTGGTTTCTGACTAACAGCAGTACGTCATGAACAGGGGCCGAG
AATCGTCTCGCCGGAGGTTTGGTTTCTGTTTCGCACTCAGGTTCTGCATT
TTTGCACATCCCAACTTCCATTTGTTTCGGTCGCACTTGGGAGGCAGGCT
CTAAGCTCCAATCCTACCTCTTTGGGATTAGTGCGACCTGTGCAATAGAA
TGGTCTATCCTCAATTCCCCCTCCCCTCCCCCATTTCCCCATTTCCTCAT
TTTCCTCTTTCCCCGACTTCCACTGAACTAGACAAAGTATGGAAGAAGTC
TTTCAATCTCTGACCGCAGGGAAGATCCACGAACTACTAGTGTTTTGTGG
GATCGGTGACTGTAGCGATGAGCCCATCAAACAGCATGTCCTCGCCATTT
CCAATTTTGGTGAGCTCTCGAGCCGCAGCATAGAAAAACTTGTATACTGA
CGCATCGAAGTCCATGATCAAAGGCTGCAGGTAGGACTTACAGATCCACT
GCCAATACTTACACCCCGACACAGCCCGACCCCTGACGCAGCGGCGAATG
AAAAGCGTGGATCATACCGATTCTTGTCGACATCAGATAAACGAAGCAGG
CCAGACTACACAGGGCTAGATGGGTCGCCTACGAAGAAGAAAAGGAGACG
TAAAGATAAAACTAAGGTCGACCGCGCGGCGAATGATAATACGCAGAAAG
AAAAAGACGCTGTGGTCACTCAGGAAGGTGGTACGCCTCTCCCGCATCCC
CCGACGAGTGAGAAATCAGCGGAGATTGCCCCCTGCCTCCAGCTTCAAGC
TCTCTCCAACCAGCCGGTCATTTCCATAAACACCCAAAGGATCGAAACGG
CTCTGAACAGGGTGCCAGATAGTATCCTGGAGAACATACTCATCAGTTGT
GTGCGGTTGAACGATCGGCTTGGAAGGTACGGGCAACGTTCTGCACAGAC
AACTGTGACAACCAGGGTCAAGACTATTCAAAGCTTCGTCGATGAAATTA
TCCAGCTAGACTACTCCGATGCCATCCAAGCGATCAAGCAAGAAAACGCC
TTTTCAGCCAGCAAGAGCATCCAGACTCGATACAACGAAACCGCGTATTG
GGAAATCATAGAGAAAGGTGCAGACCTCCTCGATCTGGAGAGCTTGCCAA
CCCCGAAAGGGCCTCTCGATGAGTTCACAATGGCCGAGAAGGTTGCGACC
GAACGCTTCATGAGAGAAGCAGGTTATGGCCTCAGCCTTGCTAACCAGCG
TCAGTGCCGCCTTTTCTGGAAGAGGCTTTGCGAGATGCGGAGAATGGGGG
TTGATAAGATTCTCCTTTATCGGACTAAGGAGTTTGATCGCTTTTGCAAA
ACCTATCCGTCAGAGGATGGGGCGTCCCTGGTACAAATGGTTTGGCTATG
GGAAGATATGTACGGTTTGCAGATCAAACAGCTGGAAAGCCGGGTAATTC
AACAGAGTATCGGCGATCATACGGGAAGACTATGGCTCAGCGAGCCTAAT
GTGGCAGATAGATTAAAGATTCCACATTCTGCGTGGGACAGTGGGAGTAA
CCCGTGGCACTCTGACGAGGAAGCTATCAATTTTCAATCGAGAACGCCAC
ATCAGCCATCATCTACTCAATTTGGTGGGTTTTTTGACTTGTATTCCGGG
GGCGAGGGGATGAGAAACAAGTCTATATTTGTGACCATACTACCCAAAGA
CAAGAACTTCTTCTCTGTATGCCCCATCATATCAGTCGAGGAAGGAGACT
GTCTCGGAGTGTTTGCTGGGGTGATTCGCTACTCGGGGCTTTGCAACGTT
ACATATGGTGTGCCCGGCCCTGAAGAAAGTCTCTGGTTGGATTATTCCAC
TGTCACCGGGGCACTCAACTTGATGGGTGTTTCGCGCCCTGGCGAAGATT
CCAATGTTCGCCTTGATTGGGAGCTCATTAGTGAGCGAAAATCAGAAAAA
CCGGTCTTGATGTGGAGGGTGACAGCTCGAGCCATCCGGTCGATTAGACC
GTTTGAGGAGATGATCAGAGCTGCTCCGCGAAAGGAGCAATACCTTTTAC
ATAAGTCAGCTGCCGCCGCAGAAAGGGGATTTAGGACATGTGGACAGTAA
TAGGCTCAGAAGTAATTGAATTTTTTTATCCATTCCATCTGTTCCAAAG back to topCoding sequence (CDS) from alignment at ch6:4012223..4014871- >KJC3_009026-T1 ID=KJC3_009026-T1|Name=KJC3_009026-T1|organism=Aspergillus niger KJC3|type=CDS|length=5094bp|location=Sequence derived from alignment at ch6:4012223..4014871- (Aspergillus niger KJC3)
TGCCGCCTTTTCTGGAAGAGGCTTTGCGAGATGCGGAGAATGGGGGTTGA
TAAGATTCTCCTTTATCGGACTAAGGAGTTTGATCGCTTTTGCAAAACCT
ATCCGTCAGAGGATGGGGCGTCCCTGGTACAAATGGTTTGGCTATGGGAA
GATATGTACGGTTTGCAGATCAAACAGCTGGAAAGCCGGGTAATTCAACA
GAGTATCGGCGATCATACGGGAAGACTATGGCTCAGCGAGCCTAATGTGG
CAGATAGATTAAAGATTCCACATTCTGCGTGGGACAGTGGGAGTAACCCG
TGGCACTCTGACGAGGAAGCTATCAATTTTCAATCGAGAACGCCACATCA
GCCATCATCTACTCAATTTGGTGGGTTTTTTGACTTGTATTCCGGGGGCG
AGGGGATGAGAAACAAGTCTATATTTGTGACCATACTACCCAAAGACAAG
AACTTCTTCTCTGTATGCCCCATCATATCAGTCGAGGAAGGAGACTGTCT
CGGAGTGTTTGCTGGGGTGATTCGCTACTCGGGGCTTTGCAACGTTACAT
ATGGTGTGCCCGGCCCTGAAGAAAGTCTCTGGTTGGATTATTCCACTGTC
ACCGGGGCACTCAACTTGATGGGTGTTTCGCGCCCTGGCGAAGATTCCAA
TGTTCGCCTTGATTGGGAGCTCATTAGTGAGCGAAAATCAGAAAAACCGG
TCTTGATGTGGAGGGTGACAGCTCGAGCCATCCGGTCGATTAGACCGTTT
GAGGAGATGATCAGAGCTGCTCCGCGAAAGGAGCAATACCTTTTACATAA
GTCAGCTGCCGCCGCAGAAAGGGGATTTAGGACATGTGGACAGTAATCCA
TGATCAAAGGCTGCAGGTAGGACTTACAGATCCACTGCCAATACTTACAC
CCCGACACAGCCCGACCCCTGACGCAGCGGCGAATGAAAAGCGTGGATCA
TACCGATTCTTGTCGACATCAGATAAACGAAGCAGGCCAGACTACACAGG
GCTAGATGGGTCGCCTACGAAGAAGAAAAGGAGACGTAAAGATAAAACTA
AGGTCGACCGCGCGGCGAATGATAATACGCAGAAAGAAAAAGACGCTGTG
GTCACTCAGGAAGGTGGTACGCCTCTCCCGCATCCCCCGACGAGTGAGAA
ATCAGCGGAGATTGCCCCCTGCCTCCAGCTTCAAGCTCTCTCCAACCAGC
CGGTCATTTCCATAAACACCCAAAGGATCGAAACGGCTCTGAACAGGGTG
CCAGATAGTATCCTGGAGAACATACTCATCAGTTGTGTGCGGTTGAACGA
TCGGCTTGGAAGGTACGGGCAACGTTCTGCACAGACAACTGTGACAACCA
GGGTCAAGACTATTCAAAGCTTCGTCGATGAAATTATCCAGCTAGACTAC
TCCGATGCCATCCAAGCGATCAAGCAAGAAAACGCCTTTTCAGCCAGCAA
GAGCATCCAGACTCGATACAACGAAACCGCGTATTGGGAAATCATAGAGA
AAGGTGCAGACCTCCTCGATCTGGAGAGCTTGCCAACCCCGAAAGGGCCT
CTCGATGAGTTCACAATGGCCGAGAAGATGGAAGAAGTCTTTCAATCTCT
GACCGCAGGGAAGATCCACGAACTACTAGTGTTTTGTGGGATCGGTGACT
GTAGCGATGAGCCCATCAAACAGCATGTCCTCGCCATTTCCAATTTTGTG
CCGCCTTTTCTGGAAGAGGCTTTGCGAGATGCGGAGAATGGGGGTTGATA
AGATTCTCCTTTATCGGACTAAGGAGTTTGATCGCTTTTGCAAAACCTAT
CCGTCAGAGGATGGGGCGTCCCTGGTACAAATGGTTTGGCTATGGGAAGA
TATGTACGGTTTGCAGATCAAACAGCTGGAAAGCCGGGTAATTCAACAGA
GTATCGGCGATCATACGGGAAGACTATGGCTCAGCGAGCCTAATGTGGCA
GATAGATTAAAGATTCCACATTCTGCGTGGGACAGTGGGAGTAACCCGTG
GCACTCTGACGAGGAAGCTATCAATTTTCAATCGAGAACGCCACATCAGC
CATCATCTACTCAATTTGGTGGGTTTTTTGACTTGTATTCCGGGGGCGAG
GGGATGAGAAACAAGTCTATATTTGTGACCATACTACCCAAAGACAAGAA
CTTCTTCTCTGTATGCCCCATCATATCAGTCGAGGAAGGAGACTGTCTCG
GAGTGTTTGCTGGGGTGATTCGCTACTCGGGGCTTTGCAACGTTACATAT
GGTGTGCCCGGCCCTGAAGAAAGTCTCTGGTTGGATTATTCCACTGTCAC
CGGGGCACTCAACTTGATGGGTGTTTCGCGCCCTGGCGAAGATTCCAATG
TTCGCCTTGATTGGGAGCTCATTAGTGAGCGAAAATCAGAAAAACCGGTC
TTGATGTGGAGGGTGACAGCTCGAGCCATCCGGTCGATTAGACCGTTTGA
GGAGATGATCAGAGCTGCTCCGCGAAAGGAGCAATACCTTTTACATAAGT
CAGCTGCCGCCGCAGAAAGGGGATTTAGGACATGTGGACAGTAATCCATG
ATCAAAGGCTGCAGGTAGGACTTACAGATCCACTGCCAATACTTACACCC
CGACACAGCCCGACCCCTGACGCAGCGGCGAATGAAAAGCGTGGATCATA
CCGATTCTTGTCGACATCAGATAAACGAAGCAGGCCAGACTACACAGGGC
TAGATGGGTCGCCTACGAAGAAGAAAAGGAGACGTAAAGATAAAACTAAG
GTCGACCGCGCGGCGAATGATAATACGCAGAAAGAAAAAGACGCTGTGGT
CACTCAGGAAGGTGGTACGCCTCTCCCGCATCCCCCGACGAGTGAGAAAT
CAGCGGAGATTGCCCCCTGCCTCCAGCTTCAAGCTCTCTCCAACCAGCCG
GTCATTTCCATAAACACCCAAAGGATCGAAACGGCTCTGAACAGGGTGCC
AGATAGTATCCTGGAGAACATACTCATCAGTTGTGTGCGGTTGAACGATC
GGCTTGGAAGGTACGGGCAACGTTCTGCACAGACAACTGTGACAACCAGG
GTCAAGACTATTCAAAGCTTCGTCGATGAAATTATCCAGCTAGACTACTC
CGATGCCATCCAAGCGATCAAGCAAGAAAACGCCTTTTCAGCCAGCAAGA
GCATCCAGACTCGATACAACGAAACCGCGTATTGGGAAATCATAGAGAAA
GGTGCAGACCTCCTCGATCTGGAGAGCTTGCCAACCCCGAAAGGGCCTCT
CGATGAGTTCACAATGGCCGAGAAGATGGAAGAAGTCTTTCAATCTCTGA
CCGCAGGGAAGATCCACGAACTACTAGTGTTTTGTGGGATCGGTGACTGT
AGCGATGAGCCCATCAAACAGCATGTCCTCGCCATTTCCAATTTTGTGCC
GCCTTTTCTGGAAGAGGCTTTGCGAGATGCGGAGAATGGGGGTTGATAAG
ATTCTCCTTTATCGGACTAAGGAGTTTGATCGCTTTTGCAAAACCTATCC
GTCAGAGGATGGGGCGTCCCTGGTACAAATGGTTTGGCTATGGGAAGATA
TGTACGGTTTGCAGATCAAACAGCTGGAAAGCCGGGTAATTCAACAGAGT
ATCGGCGATCATACGGGAAGACTATGGCTCAGCGAGCCTAATGTGGCAGA
TAGATTAAAGATTCCACATTCTGCGTGGGACAGTGGGAGTAACCCGTGGC
ACTCTGACGAGGAAGCTATCAATTTTCAATCGAGAACGCCACATCAGCCA
TCATCTACTCAATTTGGTGGGTTTTTTGACTTGTATTCCGGGGGCGAGGG
GATGAGAAACAAGTCTATATTTGTGACCATACTACCCAAAGACAAGAACT
TCTTCTCTGTATGCCCCATCATATCAGTCGAGGAAGGAGACTGTCTCGGA
GTGTTTGCTGGGGTGATTCGCTACTCGGGGCTTTGCAACGTTACATATGG
TGTGCCCGGCCCTGAAGAAAGTCTCTGGTTGGATTATTCCACTGTCACCG
GGGCACTCAACTTGATGGGTGTTTCGCGCCCTGGCGAAGATTCCAATGTT
CGCCTTGATTGGGAGCTCATTAGTGAGCGAAAATCAGAAAAACCGGTCTT
GATGTGGAGGGTGACAGCTCGAGCCATCCGGTCGATTAGACCGTTTGAGG
AGATGATCAGAGCTGCTCCGCGAAAGGAGCAATACCTTTTACATAAGTCA
GCTGCCGCCGCAGAAAGGGGATTTAGGACATGTGGACAGTAATCCATGAT
CAAAGGCTGCAGGTAGGACTTACAGATCCACTGCCAATACTTACACCCCG
ACACAGCCCGACCCCTGACGCAGCGGCGAATGAAAAGCGTGGATCATACC
GATTCTTGTCGACATCAGATAAACGAAGCAGGCCAGACTACACAGGGCTA
GATGGGTCGCCTACGAAGAAGAAAAGGAGACGTAAAGATAAAACTAAGGT
CGACCGCGCGGCGAATGATAATACGCAGAAAGAAAAAGACGCTGTGGTCA
CTCAGGAAGGTGGTACGCCTCTCCCGCATCCCCCGACGAGTGAGAAATCA
GCGGAGATTGCCCCCTGCCTCCAGCTTCAAGCTCTCTCCAACCAGCCGGT
CATTTCCATAAACACCCAAAGGATCGAAACGGCTCTGAACAGGGTGCCAG
ATAGTATCCTGGAGAACATACTCATCAGTTGTGTGCGGTTGAACGATCGG
CTTGGAAGGTACGGGCAACGTTCTGCACAGACAACTGTGACAACCAGGGT
CAAGACTATTCAAAGCTTCGTCGATGAAATTATCCAGCTAGACTACTCCG
ATGCCATCCAAGCGATCAAGCAAGAAAACGCCTTTTCAGCCAGCAAGAGC
ATCCAGACTCGATACAACGAAACCGCGTATTGGGAAATCATAGAGAAAGG
TGCAGACCTCCTCGATCTGGAGAGCTTGCCAACCCCGAAAGGGCCTCTCG
ATGAGTTCACAATGGCCGAGAAGATGGAAGAAGTCTTTCAATCTCTGACC
GCAGGGAAGATCCACGAACTACTAGTGTTTTGTGGGATCGGTGACTGTAG
CGATGAGCCCATCAAACAGCATGTCCTCGCCATTTCCAATTTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009026-T1.utr3p1 | KJC3_009026-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009026-T1.utr5p1 | KJC3_009026-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4012223..4014871 - |
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