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KJC3_009027-T1, KJC3_009027-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009027-T1
Unique NameKJC3_009027-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4019702..4020059-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009027-T1 ID=KJC3_009027-T1|Name=KJC3_009027-T1|organism=Aspergillus niger KJC3|type=mRNA|length=358bp|location=Sequence derived from alignment at ch6:4019702..4020059- (Aspergillus niger KJC3)
ATGGCTGCTTTGGAAAGAGGTCGATCGGATAATCTCTCTAAGAGAAAATT
AATTCGTCAAAAACAGTACCGCCGCAAGACAAACTTGATGAAGAAGGCTT
CTGAATATAGCAAGATGTGTGATGCGGATGTGTGCGTAGGTATTCGCATG
CGGGACACTGGTCAGATATATATTTTGTCAGCGGATACTTCGGGCTTTTG
GGCCTTTCTTACCCTGCAATTAGTAAGTGAAAACATGACGTCATCTAGCG
GGCGGCACGCTGACTAGTCAGAACTCTCATTACCCGGCTCCGACCGTAAT
GACAGATGGTGATTTGCAGAGAGCCGGAGAAGAGACCGTCTCCAGAGACT
CACGATAG
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Coding sequence (CDS) from alignment at ch6:4019702..4020059-

>KJC3_009027-T1 ID=KJC3_009027-T1|Name=KJC3_009027-T1|organism=Aspergillus niger KJC3|type=CDS|length=618bp|location=Sequence derived from alignment at ch6:4019702..4020059- (Aspergillus niger KJC3)
AACTCTCATTACCCGGCTCCGACCGTAATGACAGATGGTGATTTGCAGAG
AGCCGGAGAAGAGACCGTCTCCAGAGACTCACGATAGATGGCTGCTTTGG
AAAGAGGTCGATCGGATAATCTCTCTAAGAGAAAATTAATTCGTCAAAAA
CAGTACCGCCGCAAGACAAACTTGATGAAGAAGGCTTCTGAATATAGCAA
GATGTGTGATGCGGATGTGTGCGTAGGTATTCGCATGCGGGACACTGGTC
AGATATATATTTTGTCAGCGGATACTTCGGGCTTTTGGGCCTTTCTTACC
CTGCAATTAAACTCTCATTACCCGGCTCCGACCGTAATGACAGATGGTGA
TTTGCAGAGAGCCGGAGAAGAGACCGTCTCCAGAGACTCACGATAGATGG
CTGCTTTGGAAAGAGGTCGATCGGATAATCTCTCTAAGAGAAAATTAATT
CGTCAAAAACAGTACCGCCGCAAGACAAACTTGATGAAGAAGGCTTCTGA
ATATAGCAAGATGTGTGATGCGGATGTGTGCGTAGGTATTCGCATGCGGG
ACACTGGTCAGATATATATTTTGTCAGCGGATACTTCGGGCTTTTGGGCC
TTTCTTACCCTGCAATTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009027KJC3_009027Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009027-T1KJC3_009027-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009027-T1.cdsKJC3_009027-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009027-T1.exon2KJC3_009027-T1.exon2Aspergillus niger KJC3exon
KJC3_009027-T1.exon1KJC3_009027-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036879
DBxrefInterPro:IPR002100
DBxrefPFAM:PF00319
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4019702..4020059 -
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