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KJC3_009055-T1, KJC3_009055-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009055-T1
Unique NameKJC3_009055-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4104190..4106212-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009055-T1 ID=KJC3_009055-T1|Name=KJC3_009055-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2023bp|location=Sequence derived from alignment at ch6:4104190..4106212- (Aspergillus niger KJC3)
GCAAACTGTCACTTATCTAATGTGATTGGCCCTCACAAAGATTACCCACT
TTAACGACCACAGTACCATACGGTAAGCACATCAATGCAACATTGAAACA
GAATATCAGGTACGGAGAAGTTCGTTTGTCTGTTGAGATTTGTGGGGTAT
GACTGACCTGCCTTTCAATTTTCCTTTACTATTTTACACCGTTAACCTGC
TGGTGTTAGATATGACCACCACAAGCATCTCAACCAGATTTCACGTTACG
TTGTATCGGTAAACCACTTGGATCGGCGAGATCCACTCCGAATGCGATGA
CATAACCACCCTGAACAGTTAGTTAATCAAAAATAATAAGAACCTCCATT
TGTTCCTCCGTGTGTGAAGATAAAGCACGAATACCTCCCATCTGCACTCA
AAAAACTCACCATCCTGCCAGTCTGTCTCAGCCACGGGGGACTCATTCAG
TCTACAGCAACAATATCCCCTTGAGACCTTATAGTGTTATCGATTTGGAA
AAATTCTACAACATGCCCAACGATACCTACAATCTTGTCCAGTCCCGCTA
TGGTGACATCGCTAAGCAGAGTTACACCACTCAGCAGCACGAGAAAGAAG
AGCAGATCGCCAGGGCCTTCGGCTACAGTGCGGAGGATCTCGGTTCGCTG
CCAGAGAAGACGAACCTCGGATTAAGCTGCGGAAACCCAGTAGGGTTTGC
CAATATGAAAGAAGTCTGGTGCTTGACTTATAACTTCGCACGACGGTGAC
GAATGGAAAATGCTGACCTTCGAGTATATAGGGCGAGACGATTCTTGACC
TTGGCAGCGGCAGTGGCATCGATGTCCTCCTGGCGGCCCGTAAAGTCGGG
GTCAATGGGCAGGCAATCGGCGTTGACATGACAAGGGTAAGTGATTCGAG
TTCGAGTTCTTTGCCTCTGTAGAGACCAGGATTGATAGTAGACATAGAGC
ATGATCGAACTCGCTGAGAAAAATACACAGAAGGCGGGAGTCTCCAACGC
CAAGTTTATTGAAGCAACTATCAATTCCGTGCCACTACCAGACTCCAGCG
TCGACTGTATCATTAGTAACTGTGTCGTCAACCTTGTTCCAGCGAACGAT
AAACCGGCCGTGTTTAAAGAGATTGCTCGCCTACTGAAGCCGGGCGGAAG
GGTTGCCATCAGTGATATTCTGGCTCGAAAGCCGCTCCCGGATCACATTA
CTAAGAACATGGCGCTGTATGTTGGGTGTGTTGCCGGTGCGAGTGAGATT
GCGAGATATGAGGAGTATCTTCAGCAAACCGGATTCAAGGGTACGTGTAC
TGCCATTAAGGGCACTTGAGAGCTTCTGTACTAAATTGCCGGTAGGTGTG
CTTGTCGTTGACGCGAAGTCGGACCTGAATCTTTACAAGCAGTCGTCGTA
TTTGTCGCAGAGCTCGTGCTGCGGCAGTGGGGGTTCGAGAAGGGAGACTA
CGAGTGACGTTGCAGAGTTGGATTTTAATGAGTGGGTCGGTCAGTTATTA
TCCTCCATCCTGGCTCAAGCTTGATCGCGCTGTTGACAATTTTTCCAGGC
TCGTTTCAGATCTACGCTATCAAGGCTTAGGTAACTTTCTTAAGAACTGT
TATGGAGAGGCAAAGGATCCGGTTTGATGAGAATGCCCTTGCAGTGCATG
GCTCGGACAAGCGCTGTCCCATTACGTTCACGATGAGTATGTACAAAGGG
GTGACCCGAGAATTAGCCCAATTAAATGTCACTTAAATAACTCATCGCGT
GATCATTAATTTAGCAGCTGAAAGATGTCCATGTTTTTTACCATGCAGCT
GTCGCTCGACTGACACCCTAGTTCCGACCGCACATCCTGCATGTTGGGGT
AGCTTCGCATAGATGAAATGATCCCGGCTGCAGTTTCGCACGGGGTACAT
TGTCCTGGTTGTCTGGAGTCCTGGTGCCTGTAGGGTGGTTGTAACGTTGA
AATATCAGGAGTGGGAGAGTCGAACGGGACACTCAGCTCCGAGTCCCCAT
CGGAAATTTGGCTGTCGGATATA
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Coding sequence (CDS) from alignment at ch6:4104190..4106212-

>KJC3_009055-T1 ID=KJC3_009055-T1|Name=KJC3_009055-T1|organism=Aspergillus niger KJC3|type=CDS|length=4125bp|location=Sequence derived from alignment at ch6:4104190..4106212- (Aspergillus niger KJC3)
GCTCGTTTCAGATCTACGCTATCAAGGCTTAGGTGTGCTTGTCGTTGACG
CGAAGTCGGACCTGAATCTTTACAAGCAGTCGTCGTATTTGTCGCAGAGC
TCGTGCTGCGGCAGTGGGGGTTCGAGAAGGGAGACTACGAGTGACGTTGC
AGAGTTGGATTTTAATGAGTGGGTCGAGCATGATCGAACTCGCTGAGAAA
AATACACAGAAGGCGGGAGTCTCCAACGCCAAGTTTATTGAAGCAACTAT
CAATTCCGTGCCACTACCAGACTCCAGCGTCGACTGTATCATTAGTAACT
GTGTCGTCAACCTTGTTCCAGCGAACGATAAACCGGCCGTGTTTAAAGAG
ATTGCTCGCCTACTGAAGCCGGGCGGAAGGGTTGCCATCAGTGATATTCT
GGCTCGAAAGCCGCTCCCGGATCACATTACTAAGAACATGGCGCTGTATG
TTGGGTGTGTTGCCGGTGCGAGTGAGATTGCGAGATATGAGGAGTATCTT
CAGCAAACCGGATTCAAGGGGCGAGACGATTCTTGACCTTGGCAGCGGCA
GTGGCATCGATGTCCTCCTGGCGGCCCGTAAAGTCGGGGTCAATGGGCAG
GCAATCGGCGTTGACATGACAAGGATGCCCAACGATACCTACAATCTTGT
CCAGTCCCGCTATGGTGACATCGCTAAGCAGAGTTACACCACTCAGCAGC
ACGAGAAAGAAGAGCAGATCGCCAGGGCCTTCGGCTACAGTGCGGAGGAT
CTCGGTTCGCTGCCAGAGAAGACGAACCTCGGATTAAGCTGCGGAAACCC
AGTAGGGTTTGCCAATATGAAAGAAGCTCGTTTCAGATCTACGCTATCAA
GGCTTAGGTGTGCTTGTCGTTGACGCGAAGTCGGACCTGAATCTTTACAA
GCAGTCGTCGTATTTGTCGCAGAGCTCGTGCTGCGGCAGTGGGGGTTCGA
GAAGGGAGACTACGAGTGACGTTGCAGAGTTGGATTTTAATGAGTGGGTC
GAGCATGATCGAACTCGCTGAGAAAAATACACAGAAGGCGGGAGTCTCCA
ACGCCAAGTTTATTGAAGCAACTATCAATTCCGTGCCACTACCAGACTCC
AGCGTCGACTGTATCATTAGTAACTGTGTCGTCAACCTTGTTCCAGCGAA
CGATAAACCGGCCGTGTTTAAAGAGATTGCTCGCCTACTGAAGCCGGGCG
GAAGGGTTGCCATCAGTGATATTCTGGCTCGAAAGCCGCTCCCGGATCAC
ATTACTAAGAACATGGCGCTGTATGTTGGGTGTGTTGCCGGTGCGAGTGA
GATTGCGAGATATGAGGAGTATCTTCAGCAAACCGGATTCAAGGGGCGAG
ACGATTCTTGACCTTGGCAGCGGCAGTGGCATCGATGTCCTCCTGGCGGC
CCGTAAAGTCGGGGTCAATGGGCAGGCAATCGGCGTTGACATGACAAGGA
TGCCCAACGATACCTACAATCTTGTCCAGTCCCGCTATGGTGACATCGCT
AAGCAGAGTTACACCACTCAGCAGCACGAGAAAGAAGAGCAGATCGCCAG
GGCCTTCGGCTACAGTGCGGAGGATCTCGGTTCGCTGCCAGAGAAGACGA
ACCTCGGATTAAGCTGCGGAAACCCAGTAGGGTTTGCCAATATGAAAGAA
GCTCGTTTCAGATCTACGCTATCAAGGCTTAGGTGTGCTTGTCGTTGACG
CGAAGTCGGACCTGAATCTTTACAAGCAGTCGTCGTATTTGTCGCAGAGC
TCGTGCTGCGGCAGTGGGGGTTCGAGAAGGGAGACTACGAGTGACGTTGC
AGAGTTGGATTTTAATGAGTGGGTCGAGCATGATCGAACTCGCTGAGAAA
AATACACAGAAGGCGGGAGTCTCCAACGCCAAGTTTATTGAAGCAACTAT
CAATTCCGTGCCACTACCAGACTCCAGCGTCGACTGTATCATTAGTAACT
GTGTCGTCAACCTTGTTCCAGCGAACGATAAACCGGCCGTGTTTAAAGAG
ATTGCTCGCCTACTGAAGCCGGGCGGAAGGGTTGCCATCAGTGATATTCT
GGCTCGAAAGCCGCTCCCGGATCACATTACTAAGAACATGGCGCTGTATG
TTGGGTGTGTTGCCGGTGCGAGTGAGATTGCGAGATATGAGGAGTATCTT
CAGCAAACCGGATTCAAGGGGCGAGACGATTCTTGACCTTGGCAGCGGCA
GTGGCATCGATGTCCTCCTGGCGGCCCGTAAAGTCGGGGTCAATGGGCAG
GCAATCGGCGTTGACATGACAAGGATGCCCAACGATACCTACAATCTTGT
CCAGTCCCGCTATGGTGACATCGCTAAGCAGAGTTACACCACTCAGCAGC
ACGAGAAAGAAGAGCAGATCGCCAGGGCCTTCGGCTACAGTGCGGAGGAT
CTCGGTTCGCTGCCAGAGAAGACGAACCTCGGATTAAGCTGCGGAAACCC
AGTAGGGTTTGCCAATATGAAAGAAGCTCGTTTCAGATCTACGCTATCAA
GGCTTAGGTGTGCTTGTCGTTGACGCGAAGTCGGACCTGAATCTTTACAA
GCAGTCGTCGTATTTGTCGCAGAGCTCGTGCTGCGGCAGTGGGGGTTCGA
GAAGGGAGACTACGAGTGACGTTGCAGAGTTGGATTTTAATGAGTGGGTC
GAGCATGATCGAACTCGCTGAGAAAAATACACAGAAGGCGGGAGTCTCCA
ACGCCAAGTTTATTGAAGCAACTATCAATTCCGTGCCACTACCAGACTCC
AGCGTCGACTGTATCATTAGTAACTGTGTCGTCAACCTTGTTCCAGCGAA
CGATAAACCGGCCGTGTTTAAAGAGATTGCTCGCCTACTGAAGCCGGGCG
GAAGGGTTGCCATCAGTGATATTCTGGCTCGAAAGCCGCTCCCGGATCAC
ATTACTAAGAACATGGCGCTGTATGTTGGGTGTGTTGCCGGTGCGAGTGA
GATTGCGAGATATGAGGAGTATCTTCAGCAAACCGGATTCAAGGGGCGAG
ACGATTCTTGACCTTGGCAGCGGCAGTGGCATCGATGTCCTCCTGGCGGC
CCGTAAAGTCGGGGTCAATGGGCAGGCAATCGGCGTTGACATGACAAGGA
TGCCCAACGATACCTACAATCTTGTCCAGTCCCGCTATGGTGACATCGCT
AAGCAGAGTTACACCACTCAGCAGCACGAGAAAGAAGAGCAGATCGCCAG
GGCCTTCGGCTACAGTGCGGAGGATCTCGGTTCGCTGCCAGAGAAGACGA
ACCTCGGATTAAGCTGCGGAAACCCAGTAGGGTTTGCCAATATGAAAGAA
GCTCGTTTCAGATCTACGCTATCAAGGCTTAGGTGTGCTTGTCGTTGACG
CGAAGTCGGACCTGAATCTTTACAAGCAGTCGTCGTATTTGTCGCAGAGC
TCGTGCTGCGGCAGTGGGGGTTCGAGAAGGGAGACTACGAGTGACGTTGC
AGAGTTGGATTTTAATGAGTGGGTCGAGCATGATCGAACTCGCTGAGAAA
AATACACAGAAGGCGGGAGTCTCCAACGCCAAGTTTATTGAAGCAACTAT
CAATTCCGTGCCACTACCAGACTCCAGCGTCGACTGTATCATTAGTAACT
GTGTCGTCAACCTTGTTCCAGCGAACGATAAACCGGCCGTGTTTAAAGAG
ATTGCTCGCCTACTGAAGCCGGGCGGAAGGGTTGCCATCAGTGATATTCT
GGCTCGAAAGCCGCTCCCGGATCACATTACTAAGAACATGGCGCTGTATG
TTGGGTGTGTTGCCGGTGCGAGTGAGATTGCGAGATATGAGGAGTATCTT
CAGCAAACCGGATTCAAGGGGCGAGACGATTCTTGACCTTGGCAGCGGCA
GTGGCATCGATGTCCTCCTGGCGGCCCGTAAAGTCGGGGTCAATGGGCAG
GCAATCGGCGTTGACATGACAAGGATGCCCAACGATACCTACAATCTTGT
CCAGTCCCGCTATGGTGACATCGCTAAGCAGAGTTACACCACTCAGCAGC
ACGAGAAAGAAGAGCAGATCGCCAGGGCCTTCGGCTACAGTGCGGAGGAT
CTCGGTTCGCTGCCAGAGAAGACGAACCTCGGATTAAGCTGCGGAAACCC
AGTAGGGTTTGCCAATATGAAAGAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009055KJC3_009055Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009055-T1KJC3_009055-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009055-T1.cdsKJC3_009055-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009055-T1.utr3p2KJC3_009055-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_009055-T1.utr3p1KJC3_009055-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009055-T1.exon8KJC3_009055-T1.exon8Aspergillus niger KJC3exon
KJC3_009055-T1.exon7KJC3_009055-T1.exon7Aspergillus niger KJC3exon
KJC3_009055-T1.exon6KJC3_009055-T1.exon6Aspergillus niger KJC3exon
KJC3_009055-T1.exon5KJC3_009055-T1.exon5Aspergillus niger KJC3exon
KJC3_009055-T1.exon4KJC3_009055-T1.exon4Aspergillus niger KJC3exon
KJC3_009055-T1.exon3KJC3_009055-T1.exon3Aspergillus niger KJC3exon
KJC3_009055-T1.exon2KJC3_009055-T1.exon2Aspergillus niger KJC3exon
KJC3_009055-T1.exon1KJC3_009055-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009055-T1.utr5p3KJC3_009055-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_009055-T1.utr5p2KJC3_009055-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009055-T1.utr5p1KJC3_009055-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefInterPro:IPR025714
DBxrefPFAM:PF05175
DBxrefPFAM:PF13847
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08242
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4104190..4106212 -
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