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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4113229..4114237- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009057-T1 ID=KJC3_009057-T1|Name=KJC3_009057-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1009bp|location=Sequence derived from alignment at ch6:4113229..4114237- (Aspergillus niger KJC3)
CATCATTGTAAGAGATGGGCTATGATGTCTATTTAGATTGCCTGTCTGCC
ACTCCGTTTCTCCTTTCGCATACAAATTGGATCGCTGTCACCCAACGTCA
TCACCCCAGCTCACCCCAGCTCACCCCAGCTCACCCTCTCCGCGCGACCT
CTCAGCCGACCGGTCGGCTATAAGAGAAATGGAAACTGCACACATCTGTC
TCGCGCCTTTACAGGCTTGGATCCCCCATTGTTTGGCAGTGCAAGACAAG
ACCGATATCCGCCATGGCAGCACGACCGCGAAGAATACAGAAACGTCTTT
CGGATAGCCCGAAATCGAAGCGCCAACAACAGAGTCGCCGAAAAGATAAC
TTGTTCTTCAAATCCTTTGAGTACTGTCACGAGTGTGATGCGGATATATT
CATCATGGTCCGAAACAAGAAAACTGGCCAAATCCTATTCTTTAACTCCG
ACAGCAACTGGCCCCCATCACTGGAGGAGCTGGTACAATATTATCCTATA
ACAATATTAAGAGTACTATTCTGATAAGATGATTTATAGGCTTCGTATTA
TCCAAAGCCGAAACAGATCACGTGGAAAGAACTAGCTGCCAGATACGTGA
TCAAAGAGTCGCAGAACGTACTGAGTGACCAGCAACAAGCCCAGGCAACT
GAAAAAGTTCATAGTGCTGTAACGGGGTCGAGAAATGAGAGTGAGGTTGT
GGCATATAGAATAGATTGCGAAGGCCCCGGAACCGCGAACGACACTAGAG
TTTGCAGTTGAGCCTCAACTGGTACAGTAAAGCAGACAGTATATACCCTG
ATTTATCATGTTACCTAGGTCTTTGTCGCGAGGGTTTGGATTGCTTCGTT
TCTACTAAACGGATATAGCACGGATGCTTATTGAGCTCCGAGCCTACTCC
AGCATTTCTGCTGTATTATTGTATTGCTCAGTATAGACCTTATTGACCAG
ATAGCCAAGGCCATGCTGCCTAGTATTTAGCCGGAGATCTCAATAGAGCG
TGTCAATTA back to topCoding sequence (CDS) from alignment at ch6:4113229..4114237- >KJC3_009057-T1 ID=KJC3_009057-T1|Name=KJC3_009057-T1|organism=Aspergillus niger KJC3|type=CDS|length=882bp|location=Sequence derived from alignment at ch6:4113229..4114237- (Aspergillus niger KJC3)
GCTTCGTATTATCCAAAGCCGAAACAGATCACGTGGAAAGAACTAGCTGC
CAGATACGTGATCAAAGAGTCGCAGAACGTACTGAGTGACCAGCAACAAG
CCCAGGCAACTGAAAAAGTTCATAGTGCTGTAACGGGGTCGAGAAATGAG
AGTGAGGTTGTGGCATATAGAATAGATTGCGAAGGCCCCGGAACCGCGAA
CGACACTAGAGTTTGCAGTTGAATGGCAGCACGACCGCGAAGAATACAGA
AACGTCTTTCGGATAGCCCGAAATCGAAGCGCCAACAACAGAGTCGCCGA
AAAGATAACTTGTTCTTCAAATCCTTTGAGTACTGTCACGAGTGTGATGC
GGATATATTCATCATGGTCCGAAACAAGAAAACTGGCCAAATCCTATTCT
TTAACTCCGACAGCAACTGGCCCCCATCACTGGAGGAGCTGGCTTCGTAT
TATCCAAAGCCGAAACAGATCACGTGGAAAGAACTAGCTGCCAGATACGT
GATCAAAGAGTCGCAGAACGTACTGAGTGACCAGCAACAAGCCCAGGCAA
CTGAAAAAGTTCATAGTGCTGTAACGGGGTCGAGAAATGAGAGTGAGGTT
GTGGCATATAGAATAGATTGCGAAGGCCCCGGAACCGCGAACGACACTAG
AGTTTGCAGTTGAATGGCAGCACGACCGCGAAGAATACAGAAACGTCTTT
CGGATAGCCCGAAATCGAAGCGCCAACAACAGAGTCGCCGAAAAGATAAC
TTGTTCTTCAAATCCTTTGAGTACTGTCACGAGTGTGATGCGGATATATT
CATCATGGTCCGAAACAAGAAAACTGGCCAAATCCTATTCTTTAACTCCG
ACAGCAACTGGCCCCCATCACTGGAGGAGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046983 | protein dimerization activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009057-T1.utr3p1 | KJC3_009057-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009057-T1.utr5p1 | KJC3_009057-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036879 |
| DBxref | InterPro:IPR002100 |
| DBxref | PFAM:PF00319 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4113229..4114237 - |
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