|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4318510..4320225+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009079-T1 ID=KJC3_009079-T1|Name=KJC3_009079-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1716bp|location=Sequence derived from alignment at ch6:4318510..4320225+ (Aspergillus niger KJC3)
TCAATGGTGCCTTCACGAACTGGAGATCTGTCAACATCTTACCTTATCCT
GCATCTCATAACCAGCTGCTGCAGACACTGTACTGTACCTGAGGCTCTTG
CAACCCGACAGGTACAGCACAATCCGTGGTATCTTCCCTGAGCTTCGCAA
ACTCTCCCTCGCTTACGATGATGCTAGCCTTGGGTTATTGGACGCCTTGC
TAGGCATTAATATGTTCAATGCTGATGTCTCATACTTGTCAAAGTTAGGT
TGTAGTCCCTGCATCCCTTGGCAATGACGGATAACCTCTTTATCTATGAT
ACCTCACAGCCCGGAGAATCACGGGATGACGATTCTCGGCCGTTCCACCG
TATACTCTCCTAGCCTCCCCGCATCATACCTTGCCACAACCGCCGCTGGA
TCGACTCGGGTTCCTTCGATTGGCTGAATGGGGGGAGGAATTGGGCAACA
TATTCTTGGCATCTCTAACTTCGGTCTGTATGTTTGAATCCCCCATTCTC
GGCCCCTCTTTCCGGATCAGCTGGGGTTCATTCTTGCCGCTGAAAGCGCG
AGCTATCCATTTCCCGCATAGCGCGATTTCCCAGATTGGTCTGACATGAC
CAGACGCGTTTTGCAGGGCTAATTCTCCCTGATAACTTTGCTTTGGTTTT
TTAAATTATATGAAAATCCTGATCAGTTTCTTTGATGAACATGACACAAT
ATGACAAAGAAAAACAGCAAAAAAGGGACCAGGGCGCGTCACGGACGCAA
ACGAGGTAGCATAAGAGCGCGGTCATCGGAACTTACAAGAGAGAGTTCAT
CAGGGTATGAAACACAAATCTTTGAAAGTGAAGCTGGCTAAATTGCAATC
TCTAACAGATTGTTAACAGACTCCATCAGCCTTCCACTCAAAGACCAACA
TTTATTGCTATCCTATCTGCAGTGCATCCTAGAAGAAATGTGCGAAGACT
TTGGGGCCAAACATTATCAATGTCAACCACTTCTAGAGAAGCATGGCTGG
ATTGAGCCAAAGTCACTAGAGTTGCATGTTTGGTGCCGCGTTATCTTAAA
TTGTCCGGACGATTTATCATCACTATTAGCAGCGGTTCATGAAGAAAAAA
GAAGAGATATCCTCAATACCTGTGCCAACATTCGTCACTCTGCAGTTCAT
CGCCGACCACAGGACGTTGAATCGATCTTCCGGAGTCTGGAAGCTGGGAT
AGGTCTGGCTAAGATGCATCGGGATACAACAGTTGTCCAACATATCCAGA
GTCTCCAGTCGGACTTCCAAGCCATCATTAAGGAAACTTGGTCACGGAAA
CATGCCTTATCGGACAAGTTGCAGACACGACTTGAACAAATCTCGACAGA
GCAGGCCCGACTCAAGCAAACGGCAATGCAGGATGCTAAAGCAGAAGTAG
ACAACTCTTTTAGGGAGGCTGGTGCAAGACTTGCAGATTGTGTTAACGCT
ATGGCACACAAAATGGCATCGGCTGCCGAGGTTGTATCAGATAGCGATAA
CTTCTCCGAACCTGATATCGACAAAATTCTGCTAGAGGCAGAAAAGACAG
AAATAGCTCCTTTCGCGGAGTTGCCTGGATGAGCTCCATTAACGGCATAT
ATATAGCCTTAATAGCCCGAGGACTACAGGCTCTCTTCTGGCCATTGATC
ACGACCATGAAGCTGAATCATATGAATATCCAATTTAACTTCTCCTGCTA
ACTATCATAATCTTCA back to topCoding sequence (CDS) from alignment at ch6:4318510..4320225+ >KJC3_009079-T1 ID=KJC3_009079-T1|Name=KJC3_009079-T1|organism=Aspergillus niger KJC3|type=CDS|length=645bp|location=Sequence derived from alignment at ch6:4318510..4320225+ (Aspergillus niger KJC3)
ATGTGCGAAGACTTTGGGGCCAAACATTATCAATGTCAACCACTTCTAGA
GAAGCATGGCTGGATTGAGCCAAAGTCACTAGAGTTGCATGTTTGGTGCC
GCGTTATCTTAAATTGTCCGGACGATTTATCATCACTATTAGCAGCGGTT
CATGAAGAAAAAAGAAGAGATATCCTCAATACCTGTGCCAACATTCGTCA
CTCTGCAGTTCATCGCCGACCACAGGACGTTGAATCGATCTTCCGGAGTC
TGGAAGCTGGGATAGGTCTGGCTAAGATGCATCGGGATACAACAGTTGTC
CAACATATCCAGAGTCTCCAGTCGGACTTCCAAGCCATCATTAAGGAAAC
TTGGTCACGGAAACATGCCTTATCGGACAAGTTGCAGACACGACTTGAAC
AAATCTCGACAGAGCAGGCCCGACTCAAGCAAACGGCAATGCAGGATGCT
AAAGCAGAAGTAGACAACTCTTTTAGGGAGGCTGGTGCAAGACTTGCAGA
TTGTGTTAACGCTATGGCACACAAAATGGCATCGGCTGCCGAGGTTGTAT
CAGATAGCGATAACTTCTCCGAACCTGATATCGACAAAATTCTGCTAGAG
GCAGAAAAGACAGAAATAGCTCCTTTCGCGGAGTTGCCTGGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009079-T1.utr3p1 | KJC3_009079-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4318510..4320225 + |
|
