You are here

Home

KJC3_009079-T2, KJC3_009079-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009079-T2
Unique NameKJC3_009079-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4318510..4320225+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009079-T2 ID=KJC3_009079-T2|Name=KJC3_009079-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1716bp|location=Sequence derived from alignment at ch6:4318510..4320225+ (Aspergillus niger KJC3)
TCAATGGTGCCTTCACGAACTGGAGATCTGTCAACATCTTACCTTATCCT
GCATCTCATAACCAGCTGCTGCAGACACTGTACTGTACCTGAGGCTCTTG
CAACCCGACAGGTACAGCACAATCCGTGGTATCTTCCCTGAGCTTCGCAA
ACTCTCCCTCGCTTACGATGATGCTAGCCTTGGGTTATTGGACGCCTTGC
TAGGCATTAATATGTTCAATGCTGATGTCTCATACTTGTCAAAGTTAGGT
TGTAGTCCCTGCATCCCTTGGCAATGACGGATAACCTCTTTATCTATGAT
ACCTCACAGCCCGGAGAATCACGGGATGACGATTCTCGGCCGTTCCACCG
TATACTCTCCTAGCCTCCCCGCATCATACCTTGCCACAACCGCCGCTGGA
TCGACTCGGGTTCCTTCGATTGGCTGAATGGGGGGAGGAATTGGGCAACA
TATTCTTGGCATCTCTAACTTCGGTCTGTATGTTTGAATCCCCCATTCTC
GGCCCCTCTTTCCGGATCAGCTGGGGTTCATTCTTGCCGCTGAAAGCGCG
AGCTATCCATTTCCCGCATAGCGCGATTTCCCAGATTGGTCTGACATGAC
CAGACGCGTTTTGCAGGGCTAATTCTCCCTGATAACTTTGCTTTGGTTTT
TTAAATTATATGAAAATCCTGATCAGTTTCTTTGATGAACATGACACAAT
ATGACAAAGAAAAACAGCAAAAAAGGGACCAGGGCGCGTCACGGACGCAA
ACGAGGTAGCATAAGAGCGCGGTCATCGGAACTTACAAGAGAGAGTTCAT
CAGGGTATGAAACACAAATCTTTGAAAGTGAAGCTGGCTAAATTGCAATC
TCTAACAGATTGTTAACAGACTCCATCAGCCTTCCACTCAAAGACCAACA
TTTATTGCTATCCTATCTGCAGTGCATCCTAGAAGAAATGTGCGAAGACT
TTGGGGCCAAACATTATCAATGTCAACCACTTCTAGAGAAGCATGGCTGG
ATTGAGCCAAAGTCACTAGAGTTGCATGTTTGGTGCCGCGTTATCTTAAA
TTGTCCGGACGATTTATCATCACTATTAGCAGCGGTTCATGAAGAAAAAA
GAAGAGATATCCTCAATACCTGTGCCAACATTCGTCACTCTGCAGTTCAT
CGCCGACCACAGGACGTTGAATCGATCTTCCGGAGTCTGGAAGCTGGGAT
AGGTCTGGCTAAGATGCATCGGGATACAACAGTTGTCCAACATATCCAGA
GTCTCCAGTCGGACTTCCAAGCCATCATTAAGGAAACTTGGTCACGGAAA
CATGCCTTATCGGACAAGTTGCAGACACGACTTGAACAAATCTCGACAGA
GCAGGCCCGACTCAAGCAAACGGCAATGCAGGATGCTAAAGCAGAAGTAG
ACAACTCTTTTAGGGAGGCTGGTGCAAGACTTGCAGATTGTGTTAACGCT
ATGGCACACAAAATGGCATCGGCTGCCGAGGTTGTATCAGATAGCGATAA
CTTCTCCGAACCTGATATCGACAAAATTCTGCTAGAGGCAGAAAAGACAG
AAATAGCTCCTTTCGCGGAGTTGCCTGGATGAGCTCCATTAACGGCATAT
ATATAGCCTTAATAGCCCGAGGACTACAGGCTCTCTTCTGGCCATTGATC
ACGACCATGAAGCTGAATCATATGAATATCCAATTTAACTTCTCCTGCTA
ACTATCATAATCTTCA
back to top

Coding sequence (CDS) from alignment at ch6:4318510..4320225+

>KJC3_009079-T2 ID=KJC3_009079-T2|Name=KJC3_009079-T2|organism=Aspergillus niger KJC3|type=CDS|length=1656bp|location=Sequence derived from alignment at ch6:4318510..4320225+ (Aspergillus niger KJC3)
ATGACAAAGAAAAACAGCAAAAAAGGGACCAGGGCGCGTCACGGACGCAA
ACGAGGTAGCATAAGAGCGCGGTCATCGGAACTTACAAGAGAGAGTTCAT
CAGGATTGTTAACAGACTCCATCAGCCTTCCACTCAAAGACCAACATTTA
TTGCTATCCTATCTGCAGTGCATCCTAGAAGAAATGTGCGAAGACTTTGG
GGCCAAACATTATCAATGTCAACCACTTCTAGAGAAGCATGGCTGGATTG
AGCCAAAGTCACTAGAGTTGCATGTTTGGTGCCGCGTTATCTTAAATTGT
CCGGACGATTTATCATCACTATTAGCAGCGGTTCATGAAGAAAAAAGAAG
AGATATCCTCAATACCTGTGCCAACATTCGTCACTCTGCAGTTCATCGCC
GACCACAGGACGTTGAATCGATCTTCCGGAGTCTGGAAGCTGGGATAGGT
CTGGCTAAGATGCATCGGGATACAACAGTTGTCCAACATATCCAGAGTCT
CCAGTCGGACTTCCAAGCCATCATTAAGGAAACTTGGTCACGGAAACATG
CCTTATCGGACAAGTTGCAGACACGACTTGAACAAATCTCGACAGAGCAG
GCCCGACTCAAGCAAACGGCAATGCAGGATGCTAAAGCAGAAGTAGACAA
CTCTTTTAGGGAGGCTGGTGCAAGACTTGCAGATTGTGTTAACGCTATGG
CACACAAAATGGCATCGGCTGCCGAGGTTGTATCAGATAGCGATAACTTC
TCCGAACCTGATATCGACAAAATTCTGCTAGAGGCAGAAAAGACAGAAAT
AGCTCCTTTCGCGGAGTTGCCTGGATGAATGACAAAGAAAAACAGCAAAA
AAGGGACCAGGGCGCGTCACGGACGCAAACGAGGTAGCATAAGAGCGCGG
TCATCGGAACTTACAAGAGAGAGTTCATCAGGATTGTTAACAGACTCCAT
CAGCCTTCCACTCAAAGACCAACATTTATTGCTATCCTATCTGCAGTGCA
TCCTAGAAGAAATGTGCGAAGACTTTGGGGCCAAACATTATCAATGTCAA
CCACTTCTAGAGAAGCATGGCTGGATTGAGCCAAAGTCACTAGAGTTGCA
TGTTTGGTGCCGCGTTATCTTAAATTGTCCGGACGATTTATCATCACTAT
TAGCAGCGGTTCATGAAGAAAAAAGAAGAGATATCCTCAATACCTGTGCC
AACATTCGTCACTCTGCAGTTCATCGCCGACCACAGGACGTTGAATCGAT
CTTCCGGAGTCTGGAAGCTGGGATAGGTCTGGCTAAGATGCATCGGGATA
CAACAGTTGTCCAACATATCCAGAGTCTCCAGTCGGACTTCCAAGCCATC
ATTAAGGAAACTTGGTCACGGAAACATGCCTTATCGGACAAGTTGCAGAC
ACGACTTGAACAAATCTCGACAGAGCAGGCCCGACTCAAGCAAACGGCAA
TGCAGGATGCTAAAGCAGAAGTAGACAACTCTTTTAGGGAGGCTGGTGCA
AGACTTGCAGATTGTGTTAACGCTATGGCACACAAAATGGCATCGGCTGC
CGAGGTTGTATCAGATAGCGATAACTTCTCCGAACCTGATATCGACAAAA
TTCTGCTAGAGGCAGAAAAGACAGAAATAGCTCCTTTCGCGGAGTTGCCT
GGATGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009079KJC3_009079Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009079-T2KJC3_009079-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009079-T2.utr5p1KJC3_009079-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_009079-T2.utr5p2KJC3_009079-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009079-T2.utr5p3KJC3_009079-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009079-T2.exon1KJC3_009079-T2.exon1Aspergillus niger KJC3exon
KJC3_009079-T2.exon2KJC3_009079-T2.exon2Aspergillus niger KJC3exon
KJC3_009079-T2.exon3KJC3_009079-T2.exon3Aspergillus niger KJC3exon
KJC3_009079-T2.exon4KJC3_009079-T2.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009079-T2.cdsKJC3_009079-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009079-T2.utr3p1KJC3_009079-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4318510..4320225 +
Powered by Drupal