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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4564209..4565132- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009100-T1 ID=KJC3_009100-T1|Name=KJC3_009100-T1|organism=Aspergillus niger KJC3|type=mRNA|length=924bp|location=Sequence derived from alignment at ch6:4564209..4565132- (Aspergillus niger KJC3)
ATGTCCTCTACTACCGACGACCCCCGCCGCTTCGCCTACCTTGTCGGCAT
TGGCGTAACCCACTCCATCGCTCCCCCAATGCATACCTACGCCTTCCAAA
GCATGGGCCACCCGTGGACCTTCATCGCACAAGAATGCCCGACCGTCGAA
GACGCAGTGGCTCTCTTCCGCCAGCCCACCTTCGCCGGCGGGGTGGTAAC
CATGCCCTACAAACGCACCATCATGGAGCATCTCGACGGACTAGACGAGT
ACGCTGTGCGCCTCCAAGCGTGCAATAACGTCTATCGCGCAGAAGATGGC
TCGCTGCGCGGAACGAACACCGACTGGCGCGGTATCAAGGGGTGTTTGCT
TTCTGCTGATCCGGAGGAGAAAGGGAGGGGTAAGGCCGCGGTGATTGTGG
GCGCGGGGGGAGCATGTCGTGCGGCGGTGTATGCGCTGTATGAGGAGCTG
GGATGTACGCCTATCTACGTGGTGAATCGGGATGAGGAGGAAGTGAGGGT
TTTGAGGCAGGAAACGGAGAAGGAGTATGGGGAGGGGTTGAAGATGGTTC
ATGTTGAGAGGGTAGAGCAGGTTGCGGGTTTGTTGGAGAAGGCGGCGCCG
GGGTATATGGTTGGGACAGTTCCTGATGCGGAGCCGGTGACGGCGGAGGA
GAAGGAGGTGCATCGCATCGTGGAGGCGTTTTTGGATGCTCCTTTTAAGG
GGGTGTTGCTTGATATGTGCTTCAAGCCGAGACAGACAAGGTTTCTGAAG
ATGGCGGGACCGCGGGGGTGGGCTACGGTGGAGGGGACGGAGGTTATTGG
ACATCAGATGCCGGAGCAGTATCGGCTCTGGTGCGGGGAAGAGGAGAGAC
AGAAGTTGTCGCTGGGTGGAGCGTGGTCTGTGCTGCGGAAAGCTGCAGAG
GAGAGTCCGGGTATTAACTTCTAG back to topCoding sequence (CDS) from alignment at ch6:4564209..4565132- >KJC3_009100-T1 ID=KJC3_009100-T1|Name=KJC3_009100-T1|organism=Aspergillus niger KJC3|type=CDS|length=924bp|location=Sequence derived from alignment at ch6:4564209..4565132- (Aspergillus niger KJC3)
ATGTCCTCTACTACCGACGACCCCCGCCGCTTCGCCTACCTTGTCGGCAT
TGGCGTAACCCACTCCATCGCTCCCCCAATGCATACCTACGCCTTCCAAA
GCATGGGCCACCCGTGGACCTTCATCGCACAAGAATGCCCGACCGTCGAA
GACGCAGTGGCTCTCTTCCGCCAGCCCACCTTCGCCGGCGGGGTGGTAAC
CATGCCCTACAAACGCACCATCATGGAGCATCTCGACGGACTAGACGAGT
ACGCTGTGCGCCTCCAAGCGTGCAATAACGTCTATCGCGCAGAAGATGGC
TCGCTGCGCGGAACGAACACCGACTGGCGCGGTATCAAGGGGTGTTTGCT
TTCTGCTGATCCGGAGGAGAAAGGGAGGGGTAAGGCCGCGGTGATTGTGG
GCGCGGGGGGAGCATGTCGTGCGGCGGTGTATGCGCTGTATGAGGAGCTG
GGATGTACGCCTATCTACGTGGTGAATCGGGATGAGGAGGAAGTGAGGGT
TTTGAGGCAGGAAACGGAGAAGGAGTATGGGGAGGGGTTGAAGATGGTTC
ATGTTGAGAGGGTAGAGCAGGTTGCGGGTTTGTTGGAGAAGGCGGCGCCG
GGGTATATGGTTGGGACAGTTCCTGATGCGGAGCCGGTGACGGCGGAGGA
GAAGGAGGTGCATCGCATCGTGGAGGCGTTTTTGGATGCTCCTTTTAAGG
GGGTGTTGCTTGATATGTGCTTCAAGCCGAGACAGACAAGGTTTCTGAAG
ATGGCGGGACCGCGGGGGTGGGCTACGGTGGAGGGGACGGAGGTTATTGG
ACATCAGATGCCGGAGCAGTATCGGCTCTGGTGCGGGGAAGAGGAGAGAC
AGAAGTTGTCGCTGGGTGGAGCGTGGTCTGTGCTGCGGAAAGCTGCAGAG
GAGAGTCCGGGTATTAACTTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR013708 |
| DBxref | PFAM:PF08501 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4564209..4565132 - |
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