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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4565320..4566424+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009101-T1 ID=KJC3_009101-T1|Name=KJC3_009101-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1105bp|location=Sequence derived from alignment at ch6:4565320..4566424+ (Aspergillus niger KJC3)
GCCCTACTTACCATCCGCAGTATACTATAAAGTAAACTAACCCCCTTTAC
CCTCACTCAAACAATTATTCACTCTCAACCTTCCCCAATTCCAACCAAAG
AATCAACCAAATCAAGATCCAAATCAAGATCCAAATCTAAAGTAAAATCA
AAATGCCCGACCTCCACTCCCTCCCTCCCAATTCCCGCCCCCTCCATGCC
ATCCGCAACAACGGCCCCCATCACCTCGCAATAGAGCGCTACCTCCTGCG
CGAACTCGCCGAAGGCTGGCCATGCTACCGCGACGCCTGCGAATGGGAGA
ACTTCCGATCGATCTTCCACCCAGAAGCGCACGTCTACACAACCTGGACG
GGGCTCACGCACCACGATGCATTCATCACAGCCTCGCAGGCGGGAATGGA
CAAGGGCGCGTTCATCATGCATCGCGTGCACGGCAGCACCACGGACATTA
ACCTCGAGGGAACGCGTGCCGTCACGAAGATGAAAGCTACTATTACGCAA
AGATTCAGTGGGGTGGAGTGTGTGGGTGGGGGTACGTGTGAGGTGGATGC
GGAGAGTGACTGTCGGTTTATTTTCTTCTGGGAGAAGGTTGGCGCAGAGT
ATGAGGAGTTGAAGGGCCAGTGGAGGGCCAGGTTCGTGAGACATTGGTAT
GAGAAGGATAAGTTGCTGCTCGTTACGCCGGATCGCGTGCCGGTAATTGA
TCATGAGAGGTTGAAGGAGTATCCCGTGGGGTATCGGCATTTGGCGTATT
TGCAGGAGGAGACGATGGGGGTTAAGGTGTTGAGGGATTTGCCGGGGCAT
AGGAGGGAGAAGGCCACAGGGAGTGTTAATGGTGAGAAGCATGATTTGTT
GTATTGGCAGGCGAAGGAGTGGGTGGAGGGAGGGGATGTGAAGTGGGCTT
GATGGAGGTTTACTAGTAGTATGTATGTACGTTGGTGTATGCGCTGTGTT
GAATAGATACTACATGCTTATGAAGTTTCATGTTTATTGAATAGGTCAAG
AGGGTACTGCATTCCATTGTACTGGAGTGAGAAGGCAAGATGCCTAACAT
CTCCCACCGAAGTATTGCCATATAAATTCCGTGCCAAATTACGCACGTAG
CGAGG back to topCoding sequence (CDS) from alignment at ch6:4565320..4566424+ >KJC3_009101-T1 ID=KJC3_009101-T1|Name=KJC3_009101-T1|organism=Aspergillus niger KJC3|type=CDS|length=750bp|location=Sequence derived from alignment at ch6:4565320..4566424+ (Aspergillus niger KJC3)
ATGCCCGACCTCCACTCCCTCCCTCCCAATTCCCGCCCCCTCCATGCCAT
CCGCAACAACGGCCCCCATCACCTCGCAATAGAGCGCTACCTCCTGCGCG
AACTCGCCGAAGGCTGGCCATGCTACCGCGACGCCTGCGAATGGGAGAAC
TTCCGATCGATCTTCCACCCAGAAGCGCACGTCTACACAACCTGGACGGG
GCTCACGCACCACGATGCATTCATCACAGCCTCGCAGGCGGGAATGGACA
AGGGCGCGTTCATCATGCATCGCGTGCACGGCAGCACCACGGACATTAAC
CTCGAGGGAACGCGTGCCGTCACGAAGATGAAAGCTACTATTACGCAAAG
ATTCAGTGGGGTGGAGTGTGTGGGTGGGGGTACGTGTGAGGTGGATGCGG
AGAGTGACTGTCGGTTTATTTTCTTCTGGGAGAAGGTTGGCGCAGAGTAT
GAGGAGTTGAAGGGCCAGTGGAGGGCCAGGTTCGTGAGACATTGGTATGA
GAAGGATAAGTTGCTGCTCGTTACGCCGGATCGCGTGCCGGTAATTGATC
ATGAGAGGTTGAAGGAGTATCCCGTGGGGTATCGGCATTTGGCGTATTTG
CAGGAGGAGACGATGGGGGTTAAGGTGTTGAGGGATTTGCCGGGGCATAG
GAGGGAGAAGGCCACAGGGAGTGTTAATGGTGAGAAGCATGATTTGTTGT
ATTGGCAGGCGAAGGAGTGGGTGGAGGGAGGGGATGTGAAGTGGGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009101-T1.utr5p1 | KJC3_009101-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009101-T1.utr3p1 | KJC3_009101-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032710 |
| DBxref | InterPro:IPR037401 |
| DBxref | PFAM:PF13577 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4565320..4566424 + |
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