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KJC3_009102-T1, KJC3_009102-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009102-T1
Unique NameKJC3_009102-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4566634..4567858+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009102-T1 ID=KJC3_009102-T1|Name=KJC3_009102-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1225bp|location=Sequence derived from alignment at ch6:4566634..4567858+ (Aspergillus niger KJC3)
ACTATCCCACCATTCATCCGCCTTTGAATTACTCGTTAAAACACCGAAAA
TGACTCAACCCCTCAACTTCCACATCTTCGGCGGCTCCAACATCCGCGCC
TCCTTATCCCCCACCATCCACAACGCCGCCTTCACCCACCACCATCTCTC
GCACACCTACACCACCGCAGAATGCACCTCCTTATCAGAAATGTCCCATC
TCATCACCTCTCCCTCCTTCGGGGGTGCCAGCATCACAATGCCCCATAAA
ATCGCCGCTTTCGACCACTGCACTGAAGTGAGCGATTCAGCGCGCGCCAT
TGGGGCCATCAATACCCTCGTTACTACTCGATCCCCACAAGCAAACAGCA
AGGTAGTAGTAAAAGGCGACAATACAGACTGGTCCGGCCTCTACACACTC
ATCATCGACCATTTATCTAAAGAAGGTGTACATGCCGCAAAACCAACCGG
CAAAGTAGGCCTCGTCATCGGGGCAGGCGGTGCCGCGAGAGCCGGAGTGT
ATGCGCTCTTACAGGCTCAGTTCTCGACGATTATTATTTGGAATCGGACT
GTCGAGAAGGCGGAGAAGATTATTCAGGATTTTGATACCCTCAAGAGTGA
GGGAATCGAGATGAGGGCTGTGGGGGATGTTACGGGGATTGGACCTGTGG
ATGTGGTTATTGGGACTATTCCTGGGGATGTTAAGGCGGAGGAGGACTTT
GAAGGGCTGTTTCAGGGATCGAAGATGGGGTTGTGTGTGGAGATGGCGTA
TAAGCCGAAGGTTACACCCCTGATGAGGGTTGCGGAGAGGCGGGGTTGGG
TGGTAAAGGATGGGTTGGAAGTGTTGTTGAGGCAGGGATTTGAGCAGTAT
CGCTTGTGGACGGGGTTGGAGGCTCCGGAGCTGGTGATGAGGGAGGCGAT
TGAGGAGAGGGATGGGGTGAGGTCTAAGGTTTGATTGGAACTCATGAGAT
TTTTTGTTGGTGTTGAGATGTGATGGGGTTCATTATGCTATAGAAGATCT
TTATTTCTAGTCTACCGTATAATAATGTTTCTTTCATTGAAGAATCCCTG
TACTTTGGTGCTTTTTTTTTTTTCCATGCTCTTTGCTTTTCCGCCAGTGT
TCATAGCTGCGGGGCAATCTGTGAGGGCAAAGATTACTTACAGGAGGGCA
CAACGCTAACTGGACGCCCTACTAGTGACAGTTCCCCACAGCTTTCATAA
GAGCCATTTGACAGCTTGAGCGGAA
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Coding sequence (CDS) from alignment at ch6:4566634..4567858+

>KJC3_009102-T1 ID=KJC3_009102-T1|Name=KJC3_009102-T1|organism=Aspergillus niger KJC3|type=CDS|length=885bp|location=Sequence derived from alignment at ch6:4566634..4567858+ (Aspergillus niger KJC3)
ATGACTCAACCCCTCAACTTCCACATCTTCGGCGGCTCCAACATCCGCGC
CTCCTTATCCCCCACCATCCACAACGCCGCCTTCACCCACCACCATCTCT
CGCACACCTACACCACCGCAGAATGCACCTCCTTATCAGAAATGTCCCAT
CTCATCACCTCTCCCTCCTTCGGGGGTGCCAGCATCACAATGCCCCATAA
AATCGCCGCTTTCGACCACTGCACTGAAGTGAGCGATTCAGCGCGCGCCA
TTGGGGCCATCAATACCCTCGTTACTACTCGATCCCCACAAGCAAACAGC
AAGGTAGTAGTAAAAGGCGACAATACAGACTGGTCCGGCCTCTACACACT
CATCATCGACCATTTATCTAAAGAAGGTGTACATGCCGCAAAACCAACCG
GCAAAGTAGGCCTCGTCATCGGGGCAGGCGGTGCCGCGAGAGCCGGAGTG
TATGCGCTCTTACAGGCTCAGTTCTCGACGATTATTATTTGGAATCGGAC
TGTCGAGAAGGCGGAGAAGATTATTCAGGATTTTGATACCCTCAAGAGTG
AGGGAATCGAGATGAGGGCTGTGGGGGATGTTACGGGGATTGGACCTGTG
GATGTGGTTATTGGGACTATTCCTGGGGATGTTAAGGCGGAGGAGGACTT
TGAAGGGCTGTTTCAGGGATCGAAGATGGGGTTGTGTGTGGAGATGGCGT
ATAAGCCGAAGGTTACACCCCTGATGAGGGTTGCGGAGAGGCGGGGTTGG
GTGGTAAAGGATGGGTTGGAAGTGTTGTTGAGGCAGGGATTTGAGCAGTA
TCGCTTGTGGACGGGGTTGGAGGCTCCGGAGCTGGTGATGAGGGAGGCGA
TTGAGGAGAGGGATGGGGTGAGGTCTAAGGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004764shikimate 3-dehydrogenase (NADP+) activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009102KJC3_009102Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009102-T1.utr5p1KJC3_009102-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009102-T1.exon1KJC3_009102-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009102-T1.cdsKJC3_009102-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009102-T1.utr3p1KJC3_009102-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009102-T1KJC3_009102-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR006151
DBxrefInterPro:IPR041121
DBxrefInterPro:IPR013708
DBxrefPFAM:PF08501
DBxrefPFAM:PF18317
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4566634..4567858 +
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