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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4587971..4589040+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009113-T1 ID=KJC3_009113-T1|Name=KJC3_009113-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1070bp|location=Sequence derived from alignment at ch6:4587971..4589040+ (Aspergillus niger KJC3) TTATAATCTATCTCAACTCTCACTAAATTCCTTCTACAACACTACCAGCA
CTCATGTCCCTCTCCTCAGCAGAGAAAAAACGCCTACGGGACCGCCGCGC
CCAACAAACCCTGCGCACCAAAAAGCAGCAATACACCGCGCAGCTGGAAG
ACAAAGTGGCGCATTGCGAGCGCTACCACGACGACAGCGGCACGCAGCAT
CTCCTGCAAGTAATAGAGGGCCTGCAACGAGAGAACCAATTACTCCGAAA
CCGCCAAGAAGGACTAAAGACATTGATTACATCGTGGGAAGATCCATCGT
CATCTCCACCGCATGTACTGCAACCACAACCACCGACACAACTTCCACTA
CCACCTATCCAGTCACACACCACAACACCAAAACCATCATCATCATCATC
ACCCCCACAACCCAACAAAGAGGACCAACACCAACAACCCATATCACCTC
TGTACTCCCTCCTCCCCCTGCACTCCGACCTCCCCACCACCCCCTCCCTC
GTCTGGCTCACCCTCCCCCCATCCACTATCACCTCCTGCCCTCCCTCCCC
ACACCCCCTGGACCTCCTCTACGGCACCAACACCAACCCCCTCGCCAACG
CCATCTACACTAGCTCGCTTCGTCGTCCCTTGCGCGACCCCGAACGTCTC
GCCTTTGGCTGGCTCGGCTACCACTACAGCAAATGGCTCTTCAACCCCAC
TCCAGAGACATTCGCCAAGCTGCCAACCTTCATGCACCCCGTCGAGGAGC
AGCTGCGTATTCCGCACCCCGCGTCGCTGGATATGCTTATTTGGCCTGAG
ATCCGGGTGACGCTGATCCGCGAGTGGGAGGTGTATTCGCGGCAGAGAGA
CGATTTGTTTGGGTTTCTGGCGTGTTGTCTGAAGGTGCGGTGGCCGTGGG
GGGAGTCAATTTTAGAAAGGGATGAGCGGAATGAGTTGGTTATAAAGAAA
CGGTTCCACGAGATGATTATGTGTAAGGAGGGATGGGGGATAACGAGGGA
ATTTGTGGGTGTTTGGCCGGATGTTGTCAGAGGGGTGGATGTGGGGGAGG
TGTTGATGGAGATTGGATAA back to topCoding sequence (CDS) from alignment at ch6:4587971..4589040+ >KJC3_009113-T1 ID=KJC3_009113-T1|Name=KJC3_009113-T1|organism=Aspergillus niger KJC3|type=CDS|length=1017bp|location=Sequence derived from alignment at ch6:4587971..4589040+ (Aspergillus niger KJC3) ATGTCCCTCTCCTCAGCAGAGAAAAAACGCCTACGGGACCGCCGCGCCCA ACAAACCCTGCGCACCAAAAAGCAGCAATACACCGCGCAGCTGGAAGACA AAGTGGCGCATTGCGAGCGCTACCACGACGACAGCGGCACGCAGCATCTC CTGCAAGTAATAGAGGGCCTGCAACGAGAGAACCAATTACTCCGAAACCG CCAAGAAGGACTAAAGACATTGATTACATCGTGGGAAGATCCATCGTCAT CTCCACCGCATGTACTGCAACCACAACCACCGACACAACTTCCACTACCA CCTATCCAGTCACACACCACAACACCAAAACCATCATCATCATCATCACC CCCACAACCCAACAAAGAGGACCAACACCAACAACCCATATCACCTCTGT ACTCCCTCCTCCCCCTGCACTCCGACCTCCCCACCACCCCCTCCCTCGTC TGGCTCACCCTCCCCCCATCCACTATCACCTCCTGCCCTCCCTCCCCACA CCCCCTGGACCTCCTCTACGGCACCAACACCAACCCCCTCGCCAACGCCA TCTACACTAGCTCGCTTCGTCGTCCCTTGCGCGACCCCGAACGTCTCGCC TTTGGCTGGCTCGGCTACCACTACAGCAAATGGCTCTTCAACCCCACTCC AGAGACATTCGCCAAGCTGCCAACCTTCATGCACCCCGTCGAGGAGCAGC TGCGTATTCCGCACCCCGCGTCGCTGGATATGCTTATTTGGCCTGAGATC CGGGTGACGCTGATCCGCGAGTGGGAGGTGTATTCGCGGCAGAGAGACGA TTTGTTTGGGTTTCTGGCGTGTTGTCTGAAGGTGCGGTGGCCGTGGGGGG AGTCAATTTTAGAAAGGGATGAGCGGAATGAGTTGGTTATAAAGAAACGG TTCCACGAGATGATTATGTGTAAGGAGGGATGGGGGATAACGAGGGAATT TGTGGGTGTTTGGCCGGATGTTGTCAGAGGGGTGGATGTGGGGGAGGTGT TGATGGAGATTGGATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009113-T1.utr5p1 | KJC3_009113-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR021833 |
DBxref | PFAM:PF11905 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:4587971..4589040 + |
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