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KJC3_009118-T1, KJC3_009118-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009118-T1
Unique NameKJC3_009118-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4601849..4603719-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009118-T1 ID=KJC3_009118-T1|Name=KJC3_009118-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1871bp|location=Sequence derived from alignment at ch6:4601849..4603719- (Aspergillus niger KJC3)
CTTAGACCATTATATTGGGATGCGGCACAGTTGCATGCAGCTAGACTGGA
TAATTTATAAGCAACCATTCGTTATGATACATGGAGTGACTTCAAATAAT
AAATTCGCCCTGCTGCTATGTTCTCGTTCCTAGCCACTACTCCATTCTAC
TGAATTGTACTATTTTCTTTTTAACGCATACTCCATGTTCGTTTCTAAAA
CTAGAACAGAATCTAAAACACTCAATAAATGTCCACCGCTGGCACACTCC
CACCCCCTCCCGACGGTGGATTTCACGCCTGGGCCCAAGTAGTCTCCGGC
CACTTAGTGGTTGCGGTAACATGGGGCTATGCAGCCAGCTTCGGCGTCTT
CCAAGACCATTATGAAGTCACTCTACCGCAACCCTCGTCCGATATTTCGT
GGATCGGTGGCTTCCAGGTCTTCTGTCTCCTATTCATGTCCCCTCTCTCC
GGGCGCGCGACGGATGCCGGACAAGCTCGGCTTGTCGTCGGCATTGGCGC
ATTTTTGTTGTTACTTGGAACCTTCATGACCAGCCTAGCAAGGGTCTATT
GGCAACTATTTCTCTCCCAGGGGCTCTGCATTGGTATCGGCCAGGGACTT
ATGTGGTTGCCTAGTGTGACTCTCGTTTCCACGTACTTTGTCCGACGCCG
TGTGTTCGCCGTCACGGCTGCTGCCACCGGAACCAGCACAGGGGGGATTA
TCTTTCCAGCTATGATCCAGTTCCTGTCTCCAAGGATAGGTGAGACCACC
ATGTAATCTGTTGACGTGATCCATCCGGACTCCATCCTGATCCTCCTCCT
CTTTGGAAGGTTTTCCGTGGGCTGTCCGGTGCATGGGTCTAGTCGTCTTT
GTCATGCTCTTGATTATCCTTGCCCTACTACGCCCTCGACTGCCTCCACG
CAAGTCTGGTCCCCTGATTGAATGGGGGGCATTCACCGAGCCAGCTTATA
TGCTTTTCACCCTTGGGGTTTTTCTCCTCTACTGGACCCTCTATTTCGCG
TTCTTCTATGTATGTCGCACATCCCACCCCGTCTCATTCCCCCGAGCCAT
CCTCTCCTCAGTCAACCCACCAAACAGAAAAAAACCAACAAAACCCAGAT
CCAAGTTTACGCGACCGACCGACTAGGTCTTTCCGCCCGCGCAGGCGTCA
ATCTAGTTATCGTGATCAATGCACTCGGAATTCCAATCCGGGCACCTTGT
GGATATCTCGCGGATCGGTACCTAGGGCCACTGAACTGCTTGATCCCGTG
GGTCAGCATATGCGGGGTTTTGATGTTCTGTTGGGCGGGCGTTCACAATG
TCGCTGGCTTGTATATCTTCGCGGTGTTTTATGGTCTTGCTTCCGCGGCA
GCCATGGGTCTTTTTGCTGGCACGGTGCCATCTTTGACGAAGGACCTGGA
TAAGATAGGCACTCGGGTGGGAATGGCACTTGCCATGATCAGCTTCGGGC
CCTTGACGGGACCTTCGGTGGCGGGCGCTTTGATTGCGCAGTCTGAGCAT
GATAGTTATTTACCCGCCCAACTCTGGGCTGGAGCTGCTTTGATGGTTGG
GGCGTTGGCTTTAGTGGGGGCTCGAATTGTTATCACTGGTCCGCATCTTC
TAATTAAGGTTTAGATTGCTGTGATGGAATCCAAGCATAAGATACCTCTT
CCCCTACGTAGGTAGGCTAACACACATTTCTCGTAGGAAAAGAACCCCTG
AGATCAGGCATCGTTCCAATATGATATATCATTTCGCACGCGAGAAGCCT
ATCTTGTCATGATCATAGCGAGTAATAATATAAAAGTGATAGATCCGAGT
CAATACAGGAACAGGATTATTAGCTACTACTTGCTATGATTAGGAGGAAA
TATTGAGTATGTATTTACATA
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Coding sequence (CDS) from alignment at ch6:4601849..4603719-

>KJC3_009118-T1 ID=KJC3_009118-T1|Name=KJC3_009118-T1|organism=Aspergillus niger KJC3|type=CDS|length=3681bp|location=Sequence derived from alignment at ch6:4601849..4603719- (Aspergillus niger KJC3)
ATCCAAGTTTACGCGACCGACCGACTAGGTCTTTCCGCCCGCGCAGGCGT
CAATCTAGTTATCGTGATCAATGCACTCGGAATTCCAATCCGGGCACCTT
GTGGATATCTCGCGGATCGGTACCTAGGGCCACTGAACTGCTTGATCCCG
TGGGTCAGCATATGCGGGGTTTTGATGTTCTGTTGGGCGGGCGTTCACAA
TGTCGCTGGCTTGTATATCTTCGCGGTGTTTTATGGTCTTGCTTCCGCGG
CAGCCATGGGTCTTTTTGCTGGCACGGTGCCATCTTTGACGAAGGACCTG
GATAAGATAGGCACTCGGGTGGGAATGGCACTTGCCATGATCAGCTTCGG
GCCCTTGACGGGACCTTCGGTGGCGGGCGCTTTGATTGCGCAGTCTGAGC
ATGATAGTTATTTACCCGCCCAACTCTGGGCTGGAGCTGCTTTGATGGTT
GGGGCGTTGGCTTTAGTGGGGGCTCGAATTGTTATCACTGGTCCGCATCT
TCTAATTAAGGTTTAGGTTTTCCGTGGGCTGTCCGGTGCATGGGTCTAGT
CGTCTTTGTCATGCTCTTGATTATCCTTGCCCTACTACGCCCTCGACTGC
CTCCACGCAAGTCTGGTCCCCTGATTGAATGGGGGGCATTCACCGAGCCA
GCTTATATGCTTTTCACCCTTGGGGTTTTTCTCCTCTACTGGACCCTCTA
TTTCGCGTTCTTCTATATGTCCACCGCTGGCACACTCCCACCCCCTCCCG
ACGGTGGATTTCACGCCTGGGCCCAAGTAGTCTCCGGCCACTTAGTGGTT
GCGGTAACATGGGGCTATGCAGCCAGCTTCGGCGTCTTCCAAGACCATTA
TGAAGTCACTCTACCGCAACCCTCGTCCGATATTTCGTGGATCGGTGGCT
TCCAGGTCTTCTGTCTCCTATTCATGTCCCCTCTCTCCGGGCGCGCGACG
GATGCCGGACAAGCTCGGCTTGTCGTCGGCATTGGCGCATTTTTGTTGTT
ACTTGGAACCTTCATGACCAGCCTAGCAAGGGTCTATTGGCAACTATTTC
TCTCCCAGGGGCTCTGCATTGGTATCGGCCAGGGACTTATGTGGTTGCCT
AGTGTGACTCTCGTTTCCACGTACTTTGTCCGACGCCGTGTGTTCGCCGT
CACGGCTGCTGCCACCGGAACCAGCACAGGGGGGATTATCTTTCCAGCTA
TGATCCAGTTCCTGTCTCCAAGGATAGATCCAAGTTTACGCGACCGACCG
ACTAGGTCTTTCCGCCCGCGCAGGCGTCAATCTAGTTATCGTGATCAATG
CACTCGGAATTCCAATCCGGGCACCTTGTGGATATCTCGCGGATCGGTAC
CTAGGGCCACTGAACTGCTTGATCCCGTGGGTCAGCATATGCGGGGTTTT
GATGTTCTGTTGGGCGGGCGTTCACAATGTCGCTGGCTTGTATATCTTCG
CGGTGTTTTATGGTCTTGCTTCCGCGGCAGCCATGGGTCTTTTTGCTGGC
ACGGTGCCATCTTTGACGAAGGACCTGGATAAGATAGGCACTCGGGTGGG
AATGGCACTTGCCATGATCAGCTTCGGGCCCTTGACGGGACCTTCGGTGG
CGGGCGCTTTGATTGCGCAGTCTGAGCATGATAGTTATTTACCCGCCCAA
CTCTGGGCTGGAGCTGCTTTGATGGTTGGGGCGTTGGCTTTAGTGGGGGC
TCGAATTGTTATCACTGGTCCGCATCTTCTAATTAAGGTTTAGGTTTTCC
GTGGGCTGTCCGGTGCATGGGTCTAGTCGTCTTTGTCATGCTCTTGATTA
TCCTTGCCCTACTACGCCCTCGACTGCCTCCACGCAAGTCTGGTCCCCTG
ATTGAATGGGGGGCATTCACCGAGCCAGCTTATATGCTTTTCACCCTTGG
GGTTTTTCTCCTCTACTGGACCCTCTATTTCGCGTTCTTCTATATGTCCA
CCGCTGGCACACTCCCACCCCCTCCCGACGGTGGATTTCACGCCTGGGCC
CAAGTAGTCTCCGGCCACTTAGTGGTTGCGGTAACATGGGGCTATGCAGC
CAGCTTCGGCGTCTTCCAAGACCATTATGAAGTCACTCTACCGCAACCCT
CGTCCGATATTTCGTGGATCGGTGGCTTCCAGGTCTTCTGTCTCCTATTC
ATGTCCCCTCTCTCCGGGCGCGCGACGGATGCCGGACAAGCTCGGCTTGT
CGTCGGCATTGGCGCATTTTTGTTGTTACTTGGAACCTTCATGACCAGCC
TAGCAAGGGTCTATTGGCAACTATTTCTCTCCCAGGGGCTCTGCATTGGT
ATCGGCCAGGGACTTATGTGGTTGCCTAGTGTGACTCTCGTTTCCACGTA
CTTTGTCCGACGCCGTGTGTTCGCCGTCACGGCTGCTGCCACCGGAACCA
GCACAGGGGGGATTATCTTTCCAGCTATGATCCAGTTCCTGTCTCCAAGG
ATAGATCCAAGTTTACGCGACCGACCGACTAGGTCTTTCCGCCCGCGCAG
GCGTCAATCTAGTTATCGTGATCAATGCACTCGGAATTCCAATCCGGGCA
CCTTGTGGATATCTCGCGGATCGGTACCTAGGGCCACTGAACTGCTTGAT
CCCGTGGGTCAGCATATGCGGGGTTTTGATGTTCTGTTGGGCGGGCGTTC
ACAATGTCGCTGGCTTGTATATCTTCGCGGTGTTTTATGGTCTTGCTTCC
GCGGCAGCCATGGGTCTTTTTGCTGGCACGGTGCCATCTTTGACGAAGGA
CCTGGATAAGATAGGCACTCGGGTGGGAATGGCACTTGCCATGATCAGCT
TCGGGCCCTTGACGGGACCTTCGGTGGCGGGCGCTTTGATTGCGCAGTCT
GAGCATGATAGTTATTTACCCGCCCAACTCTGGGCTGGAGCTGCTTTGAT
GGTTGGGGCGTTGGCTTTAGTGGGGGCTCGAATTGTTATCACTGGTCCGC
ATCTTCTAATTAAGGTTTAGGTTTTCCGTGGGCTGTCCGGTGCATGGGTC
TAGTCGTCTTTGTCATGCTCTTGATTATCCTTGCCCTACTACGCCCTCGA
CTGCCTCCACGCAAGTCTGGTCCCCTGATTGAATGGGGGGCATTCACCGA
GCCAGCTTATATGCTTTTCACCCTTGGGGTTTTTCTCCTCTACTGGACCC
TCTATTTCGCGTTCTTCTATATGTCCACCGCTGGCACACTCCCACCCCCT
CCCGACGGTGGATTTCACGCCTGGGCCCAAGTAGTCTCCGGCCACTTAGT
GGTTGCGGTAACATGGGGCTATGCAGCCAGCTTCGGCGTCTTCCAAGACC
ATTATGAAGTCACTCTACCGCAACCCTCGTCCGATATTTCGTGGATCGGT
GGCTTCCAGGTCTTCTGTCTCCTATTCATGTCCCCTCTCTCCGGGCGCGC
GACGGATGCCGGACAAGCTCGGCTTGTCGTCGGCATTGGCGCATTTTTGT
TGTTACTTGGAACCTTCATGACCAGCCTAGCAAGGGTCTATTGGCAACTA
TTTCTCTCCCAGGGGCTCTGCATTGGTATCGGCCAGGGACTTATGTGGTT
GCCTAGTGTGACTCTCGTTTCCACGTACTTTGTCCGACGCCGTGTGTTCG
CCGTCACGGCTGCTGCCACCGGAACCAGCACAGGGGGGATTATCTTTCCA
GCTATGATCCAGTTCCTGTCTCCAAGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009118KJC3_009118Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009118-T1KJC3_009118-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009118-T1.cdsKJC3_009118-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009118-T1.utr3p1KJC3_009118-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009118-T1.exon3KJC3_009118-T1.exon3Aspergillus niger KJC3exon
KJC3_009118-T1.exon2KJC3_009118-T1.exon2Aspergillus niger KJC3exon
KJC3_009118-T1.exon1KJC3_009118-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009118-T1.utr5p1KJC3_009118-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4601849..4603719 -
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