You are here

Home

KJC3_009137-T1, KJC3_009137-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009137-T1
Unique NameKJC3_009137-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4657224..4659035+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009137-T1 ID=KJC3_009137-T1|Name=KJC3_009137-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1812bp|location=Sequence derived from alignment at ch6:4657224..4659035+ (Aspergillus niger KJC3)
ATGCCACCGCAAAAGCGCAAGGCATCAAGCAGTTCTGCCACCAATGGTGC
CTCGTCGCACACCAATAAACGCGAAAAGCCCGATCTTACGCGTCCGCATC
CCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACTTCTAC
CCCCCTGAGATGTGCAACGAACGGTGCGAGGCGTACAATAACGGAACGCT
GGAACGACCCATCGAATCCCTACATAGGGCATACGAAGACACGTTTGATG
AACGTCAAAAAATCCGGCCCAATGCAGCCGTCGTTCACTGGTTCAAAACA
GATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAGGTTGC
GCGAGAACACAAACTGCCTCTCGTCGGCTTGTATATTCTCTCTCCGGAGG
ACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGATGTTGCGA
ACACTAGAATTGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCTTTGTA
TATGGAAACGCAGGAAAAGAGGAATGATATTCCTCAAAGGATTATAGATC
TATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAATATGAA
GTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCAAGGAA
TGGCATACGATTTGAAGCCGCACATGATACATGCGTTGTCACTCCGGGCA
AGCTAGTCAGCCAACAGGGGAAGCAGTATGCCGTTTATAGTCCGTGGTTT
CGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAGGTCGC
GGACGAACCAGGGTCGAACCCCGGCGATGCACGCAAGCACTTCAAGACCC
TCTTTGGCTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCTCGGAG
GAAGAAAAGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCATGAGGC
ACTCCGTAGGCTGGAGGCGTTTCTGGAGGAGAAAGCAAATGACTATGATG
ACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTCCCTAT
TTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTCCAGGCCCGCAA
AAAGAACAAAGGCCACTTAAAAAGGAATCAGACCGGATATACGTCTTGGA
TTAGCGAAGTTGCCTGGCGAGATTTCTACAAGCATGTCCTGGTCCATTGG
CCATTTATCTGGTTCGTTTTCTCCATTTTGACTGACTATCCGTATAAAGC
TGACCAGTCATCGTACAGTATGAACAAGTGCTTCAAACCTGAGTTCACAA
ACTTAGCGTGGTCATATAACAAAGATCACTTCAATGCCTGGTGCGAGGGC
AAAACTGGCTATCCGATCGTCGACGCCGCCATGCGCCAAATCAAACACGC
CGCCTGGATGCACAATCGCACGCGCATGGTCGTTTCATCATTTCTTTCCA
AAGACCTTCTGATAGATTGGCGTCGAGGGGAGCGATATTTCATGGAAAAC
TTGATAGACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTC
TAGTACCGGGGTTGATCCCCAACCATATTTCCGGATCTTTAATCCTCTGC
GCCAGAGTGAGCGGTTCGATCCAGAAGGGGAGTATATTCGTCTTTGGGTG
CCGGAGCTACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCG
AGGGGCCGGGGATATTGCTGAGAAGAATGGCTATCCAAGGCCGATAGTGG
ATCATTCTGAGAGTCGAGACCGTGCGTTGGAGAATTATAAAAAGGTTGCC
CAGGGCCGTTGA
back to top

Coding sequence (CDS) from alignment at ch6:4657224..4659035+

>KJC3_009137-T1 ID=KJC3_009137-T1|Name=KJC3_009137-T1|organism=Aspergillus niger KJC3|type=CDS|length=3510bp|location=Sequence derived from alignment at ch6:4657224..4659035+ (Aspergillus niger KJC3)
ATGCCACCGCAAAAGCGCAAGGCATCAAGCAGTTCTGCCACCAATGGTGC
CTCGTCGCACACCAATAAACGCGAAAAGCCCGATCTTACGCGTCCGCATC
CCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACTTCTAC
CCCCCTGAGATGTGCAACGAACGGTGCGAGGCGTACAATAACGGAACGCT
GGAACGACCCATCGAATCCCTACATAGGGCATACGAAGACACGTTTGATG
AACGTCAAAAAATCCGGCCCAATGCAGCCGTCGTTCACTGGTTCAAAACA
GATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAGGTTGC
GCGAGAACACAAACTGCCTCTCGTCGGCTTGTATATTCTCTCTCCGGAGG
ACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGATGTTGCGA
ACACTAGAATTGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCTTTGTA
TATGGAAACGCAGGAAAAGAGGAATGATATTCCTCAAAGGATTATAGATC
TATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAATATGAA
GTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCAAGGAA
TGGCATACGATTTGAAGCCGCACATGATACATGCGTTGTCACTCCGGGCA
AGCTAGTCAGCCAACAGGGGAAGCAGTATGCCGTTTATAGTCCGTGGTTT
CGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAGGTCGC
GGACGAACCAGGGTCGAACCCCGGCGATGCACGCAAGCACTTCAAGACCC
TCTTTGGCTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCTCGGAG
GAAGAAAAGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCATGAGGC
ACTCCGTAGGCTGGAGGCGTTTCTGGAGGAGAAAGCAAATGACTATGATG
ACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTCCCTAT
TTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTCCAGGCCCGCAA
AAAGAACAAAGGCCACTTAAAAAGGAATCAGACCGGATATACGTCTTGGA
TTAGCGAAGTTGCCTGGCGAGATTTCTACAAGCATGTCCTGGTCCATTGG
CCATTTATCTGTATGAACAAGTGCTTCAAACCTGAGTTCACAAACTTAGC
GTGGTCATATAACAAAGATCACTTCAATGCCTGGTGCGAGGGCAAAACTG
GCTATCCGATCGTCGACGCCGCCATGCGCCAAATCAAACACGCCGCCTGG
ATGCACAATCGCACGCGCATGGTCGTTTCATCATTTCTTTCCAAAGACCT
TCTGATAGATTGGCGTCGAGGGGAGCGATATTTCATGGAAAACTTGATAG
ACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTCTAGTACC
GGGGTTGATCCCCAACCATATTTCCGGATCTTTAATCCTCTGCGCCAGAG
TGAGCGGTTCGATCCAGAAGGGGAGTATATTCGTCTTTGGGTGCCGGAGC
TACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCGAGGGGCC
GGGGATATTGCTGAGAAGAATGGCTATCCAAGGCCGATAGTGGATCATTC
TGAGAGTCGAGACCGTGCGTTGGAGAATTATAAAAAGGTTGCCCAGGGCC
GTTGAATGCCACCGCAAAAGCGCAAGGCATCAAGCAGTTCTGCCACCAAT
GGTGCCTCGTCGCACACCAATAAACGCGAAAAGCCCGATCTTACGCGTCC
GCATCCCCATGCCAAAGATACCGAAGACTTCGGTATCGTCCTGCGTGACT
TCTACCCCCCTGAGATGTGCAACGAACGGTGCGAGGCGTACAATAACGGA
ACGCTGGAACGACCCATCGAATCCCTACATAGGGCATACGAAGACACGTT
TGATGAACGTCAAAAAATCCGGCCCAATGCAGCCGTCGTTCACTGGTTCA
AAACAGATCTTCGGCTACATGACAATCGCGGCCTACAGATGGCATATCAG
GTTGCGCGAGAACACAAACTGCCTCTCGTCGGCTTGTATATTCTCTCTCC
GGAGGACCTGACAGCTCATTTGTCTAGTGCTCCTCGTGTGGATCTGATGT
TGCGAACACTAGAATTGTTGCGGCGAGACTTGAGTGAGCTGGATATTCCT
TTGTATATGGAAACGCAGGAAAAGAGGAATGATATTCCTCAAAGGATTAT
AGATCTATGCCAGGAGTGGGGCGCGACTCACCTCTTTGCAAACCTGGAAT
ATGAAGTCGACGAATTGCGTCGCGAGGCGAAATTAGTACGACTCTGCGCA
AGGAATGGCATACGATTTGAAGCCGCACATGATACATGCGTTGTCACTCC
GGGCAAGCTAGTCAGCCAACAGGGGAAGCAGTATGCCGTTTATAGTCCGT
GGTTTCGCGCCTGGTGTGCCTTCCTCAATGAGAACCCAGAATACCTTGAG
GTCGCGGACGAACCAGGGTCGAACCCCGGCGATGCACGCAAGCACTTCAA
GACCCTCTTTGGCTGCGAGGTGCCTGTTGCACCGGAGAACAAGCGGCTCT
CGGAGGAAGAAAAGACAAGATTCAGGGAGCTGTATCCAGAGGGCGAGCAT
GAGGCACTCCGTAGGCTGGAGGCGTTTCTGGAGGAGAAAGCAAATGACTA
TGATGACTTGCGAAACACACTCGCGGGGCGGAATACATCCGTGCTAAGTC
CCTATTTCGCGTCGGGGTCACTCAGTGCACGAACAGCGGTTTTCCAGGCC
CGCAAAAAGAACAAAGGCCACTTAAAAAGGAATCAGACCGGATATACGTC
TTGGATTAGCGAAGTTGCCTGGCGAGATTTCTACAAGCATGTCCTGGTCC
ATTGGCCATTTATCTGTATGAACAAGTGCTTCAAACCTGAGTTCACAAAC
TTAGCGTGGTCATATAACAAAGATCACTTCAATGCCTGGTGCGAGGGCAA
AACTGGCTATCCGATCGTCGACGCCGCCATGCGCCAAATCAAACACGCCG
CCTGGATGCACAATCGCACGCGCATGGTCGTTTCATCATTTCTTTCCAAA
GACCTTCTGATAGATTGGCGTCGAGGGGAGCGATATTTCATGGAAAACTT
GATAGACGGCGACTTCGCCTCGAACCACGGTGGCTGGGGATTCGGTTCTA
GTACCGGGGTTGATCCCCAACCATATTTCCGGATCTTTAATCCTCTGCGC
CAGAGTGAGCGGTTCGATCCAGAAGGGGAGTATATTCGTCTTTGGGTGCC
GGAGCTACGTGCGATTGAGGGCGCGGCAGTCCATGACCCATATGGCCGAG
GGGCCGGGGATATTGCTGAGAAGAATGGCTATCCAAGGCCGATAGTGGAT
CATTCTGAGAGTCGAGACCGTGCGTTGGAGAATTATAAAAAGGTTGCCCA
GGGCCGTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009137KJC3_009137Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009137-T1.exon1KJC3_009137-T1.exon1Aspergillus niger KJC3exon
KJC3_009137-T1.exon2KJC3_009137-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009137-T1.cdsKJC3_009137-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009137-T1KJC3_009137-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036155
DBxrefInterPro:IPR036134
DBxrefInterPro:IPR018394
DBxrefInterPro:IPR006050
DBxrefInterPro:IPR005101
DBxrefInterPro:IPR014729
DBxrefInterPro:IPR002081
DBxrefPFAM:PF03441
DBxrefPFAM:PF00875
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4657224..4659035 +
Powered by Drupal