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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4677082..4678081+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009144-T1 ID=KJC3_009144-T1|Name=KJC3_009144-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1000bp|location=Sequence derived from alignment at ch6:4677082..4678081+ (Aspergillus niger KJC3)
CCATCTTGTCAACCATGTGTTCCCCTCACCCATGCTCCTCAAACGCGACA
CCCCTTCAGGGCGCCTTCTTCCCGACATATACCGAGACTCCCACCAAGTC
CACGTCTTCACGGCCTTTGCCGCCATCGCCTGCTATAATGCCATTGAGCT
CGTCATTCTCTGTCTCTCGACCTTCAAACGCCGAGGAAGCCTTTACTTCT
GGTCCCTTCTCGTTGCCTCCCTAAGCATCGTCCCGCAGTGCGTCGGGTAT
ATCCTCCTCTTCTCCCGACCCCAAATATCCCCCTACGGTTCCGCCACTCT
TATCATGGTCGGCTGGTGCGGCATGATAACCGGCCACTCACTCGTGCTCT
GGTCCCGTCTCCATCTGGTTCTCCAGGACCCCACAACCCTTCGCTATCTT
CTCCGTCTAATCATCCTGGACGACATCCTCCTCCAAATCCCCATAACCGT
TCTCTTATACGGCACCGTTTCCACGCAGTGGGAACTCTTCAATTACGGGT
ACAATATCATGGAGCGGATCCAGCTCGTCGGCTTCTGTCTCCAAGAAGGT
CTCCTGTCGGGTCTGTATGTATGGGAGGCAGCGAAACTGCTACGACTTCG
ACCTGAAGACCGACATCGTCGTATCCTGGCGCAGCTGATCGGGATCAATA
TCCTGGTCTTGATCCTTGATGTTGCCGTCGTCGGCATTCAGTATGCGGGC
TACTATGCCTTGCAGGTCATGTTCAAGCCCGTCGCTTATAGCATTAAGCT
GAAGCTGGAGTACGCTATCCTGGGTCGACTGGTGAATGTTGTCAAGAAGG
TCAACACCCAGGAGTCACTGAGTACGCAGGGCTTTGATATGCTGCCTTCG
TCTTCGGAGGGCTTGAGACCGAGGCTGGAGCCCCATGTAGATGGTCTTGG
TGGCTTTCTGCACCCTCAGAAGGTGTATACTTCGTCTCGTGGCTCATGAA
AGCTTTTGTATATAATGATTATAGAATTTCACGGCCGTATTATCTCAGAC
back to topCoding sequence (CDS) from alignment at ch6:4677082..4678081+ >KJC3_009144-T1 ID=KJC3_009144-T1|Name=KJC3_009144-T1|organism=Aspergillus niger KJC3|type=CDS|length=918bp|location=Sequence derived from alignment at ch6:4677082..4678081+ (Aspergillus niger KJC3)
ATGCTCCTCAAACGCGACACCCCTTCAGGGCGCCTTCTTCCCGACATATA
CCGAGACTCCCACCAAGTCCACGTCTTCACGGCCTTTGCCGCCATCGCCT
GCTATAATGCCATTGAGCTCGTCATTCTCTGTCTCTCGACCTTCAAACGC
CGAGGAAGCCTTTACTTCTGGTCCCTTCTCGTTGCCTCCCTAAGCATCGT
CCCGCAGTGCGTCGGGTATATCCTCCTCTTCTCCCGACCCCAAATATCCC
CCTACGGTTCCGCCACTCTTATCATGGTCGGCTGGTGCGGCATGATAACC
GGCCACTCACTCGTGCTCTGGTCCCGTCTCCATCTGGTTCTCCAGGACCC
CACAACCCTTCGCTATCTTCTCCGTCTAATCATCCTGGACGACATCCTCC
TCCAAATCCCCATAACCGTTCTCTTATACGGCACCGTTTCCACGCAGTGG
GAACTCTTCAATTACGGGTACAATATCATGGAGCGGATCCAGCTCGTCGG
CTTCTGTCTCCAAGAAGGTCTCCTGTCGGGTCTGTATGTATGGGAGGCAG
CGAAACTGCTACGACTTCGACCTGAAGACCGACATCGTCGTATCCTGGCG
CAGCTGATCGGGATCAATATCCTGGTCTTGATCCTTGATGTTGCCGTCGT
CGGCATTCAGTATGCGGGCTACTATGCCTTGCAGGTCATGTTCAAGCCCG
TCGCTTATAGCATTAAGCTGAAGCTGGAGTACGCTATCCTGGGTCGACTG
GTGAATGTTGTCAAGAAGGTCAACACCCAGGAGTCACTGAGTACGCAGGG
CTTTGATATGCTGCCTTCGTCTTCGGAGGGCTTGAGACCGAGGCTGGAGC
CCCATGTAGATGGTCTTGGTGGCTTTCTGCACCCTCAGAAGGTGTATACT
TCGTCTCGTGGCTCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009144-T1.utr5p1 | KJC3_009144-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009144-T1.utr3p1 | KJC3_009144-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4677082..4678081 + |
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