|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4680725..4682800- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009146-T1 ID=KJC3_009146-T1|Name=KJC3_009146-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2076bp|location=Sequence derived from alignment at ch6:4680725..4682800- (Aspergillus niger KJC3)
CTAACTTTCTATGGACATTTTGTTCTCCGCCCCGCGAACATCATTCTTAA
GTAGATAGTGGGGTAATTGGGCATGTCAGTGGAAGACCTACGAACGGCGG
CGCGTGAGTGCCTACGCCGCGGTGATGCGCGCATCCCAGACTCGATGCTG
GACAAGCTCGTCGTCCCTGGAGAATTGGAGCGTTTATGGGACACCGTCTC
AGCCCACGAGGACACAGACAATGCAGCTGTAAGATACGCTGCTTTTTTAA
TACTCCGAGAGAAGGAAATTAACTGGTCACTCCAGGCATCTGAAAACCTG
TTTCTTGCTCGGGAGTGCCTGAGACTTCGAAACTCTGAGGAATTATCCGA
GTCCGATACCGCGGCAGCAAACCACATCTATGCCTGGGCGAGTCAGCATG
CCCTTCCATCTGCGGTGTATGCGGAATCGATTGAAGAGCCCAGTGGTGAG
CTGACACCTCATTCCCCTCACGAATTCAAATATGTTGACCCGCTTGTAGA
ACAGAGGAAAGCTCTTATGCATGAAGATAAGCTGAGATCATCACTATCAA
TCTCCGTGATTGCAGCCTTGGGCTCTCTGTTTCCGATGCATAAAGCAGCA
GATGTGCCAAACATCGTTCTCGCACTGGCAAGCTTCACCTCCGAAGCCGA
CCCATGGACGACAGACGAGTCACGCACAGCGTCAACTGCAATTCTTGAGA
GGTTTCGCACAACATCACCCTCGACACCAGATGCATCGTTCTGGGTTGTC
CTTGAAACCATCCTCAAGGACAAAATCCGACCTCTTTTCACAAGAACCAG
AAATCCTGCTATCACAGCAGCAGGTCGCAAGGACATGCACCCCATCCCAC
TTCCTAGATTTGATACCAGCATTCTTGACCCCGAGTCGAAACCATGGCGA
TCGTCAGACGTCTACGCGACGACCGTCTTTTCCTGGATCGTAACACAATA
TCAGGTAAATTATCTCTCAAAGTACCCTATTCCCTCATCTTTAACAGGTT
CCAGGCAAACGACATCAGCCGTCTAGAATCCCACTTCCCTCTCCTCGTCC
CACCAATTCTCGCCTTAATTGACGATGAGACCAACCCCCACAAAGCCGAC
GGCTGCACACTTCTCACCCACCTTTTACACCCCATTCAGCAAGCCAAATC
AGATATACTTAAACGCACCAACCTCTCCTCTGTCTTCATCGACGCCATCA
AACCCTGCCTCCTCTCCCTACCTACCATAACCCCCGAGTCCGATTCCATC
CGTCTCCTAGGCACAGCTTATCCAACTCTCTTCTTACTTCTCAAAACTAG
CTACTTACCAAGTGATAAACAAACCTACACCGCCGAGCTGACGAAAGTCC
TTCGCGAGAACCTCATCTCCTCCTTCCACCACATTAGCACCATGACTCCC
TCCAGTGGGACGCAATCTACGCTATCCTCGTTCCCGCATCCGAGATTATC
TACTCTTTTGTTGAACAAAATACACGACATTCTCTTCGATCTCGCGGTTC
ACACAACAAAATACCTACAGGAAATAATTCCGCTCATCTACAGTACACTG
TCTAACCCCTTCGGGACAGCCTATTCACCTCTCCTATTGGCGGGAGTGGC
TGTTACCAGGGCTGTGATTCTGAATGCACACCCGAGGATTTGGCGTTGGA
GGGGGGAGATTCTGGGTGCCGTGGCGGCATGCTGGATCAATGTGGTGGAT
GAAGAGGTCGCAGAGCGAGGGAAAGAGGGCGAAAAGGAAGATTTGACTAA
ACTGAAGATGCAGCTGAAGGGCGTGGTCTATTTGCTGAGAATGGCTTTGC
AGAACCCAGATGAGGAGGTTGCTGAGGATGAAGGGGCGGTTGAAGCGAAG
GAGGGATTCGCGAAGGAGATGGAACAGTTGGTTGGTGCTGATGAGGCATT
GAGGGAATTGCTGCTTGGGAAAGTAGATGGGAAGGATGGAAGATATTTCG
GTGCTTGATTCCAGTTGGGAACAGCCTCAATTGAGTCGCTGGATAATAAT
GGTCACGGTTTTAGAAGGATTCCCTAACAAGTACAGTAGTCCAGAACTGG
GCCCTTAGTGGTGGCTCATATTAATG back to topCoding sequence (CDS) from alignment at ch6:4680725..4682800- >KJC3_009146-T1 ID=KJC3_009146-T1|Name=KJC3_009146-T1|organism=Aspergillus niger KJC3|type=CDS|length=6900bp|location=Sequence derived from alignment at ch6:4680725..4682800- (Aspergillus niger KJC3)
GCAAACGACATCAGCCGTCTAGAATCCCACTTCCCTCTCCTCGTCCCACC
AATTCTCGCCTTAATTGACGATGAGACCAACCCCCACAAAGCCGACGGCT
GCACACTTCTCACCCACCTTTTACACCCCATTCAGCAAGCCAAATCAGAT
ATACTTAAACGCACCAACCTCTCCTCTGTCTTCATCGACGCCATCAAACC
CTGCCTCCTCTCCCTACCTACCATAACCCCCGAGTCCGATTCCATCCGTC
TCCTAGGCACAGCTTATCCAACTCTCTTCTTACTTCTCAAAACTAGCTAC
TTACCAAGTGATAAACAAACCTACACCGCCGAGCTGACGAAAGTCCTTCG
CGAGAACCTCATCTCCTCCTTCCACCACATTAGCACCATGACTCCCTCCA
GTGGGACGCAATCTACGCTATCCTCGTTCCCGCATCCGAGATTATCTACT
CTTTTGTTGAACAAAATACACGACATTCTCTTCGATCTCGCGGTTCACAC
AACAAAATACCTACAGGAAATAATTCCGCTCATCTACAGTACACTGTCTA
ACCCCTTCGGGACAGCCTATTCACCTCTCCTATTGGCGGGAGTGGCTGTT
ACCAGGGCTGTGATTCTGAATGCACACCCGAGGATTTGGCGTTGGAGGGG
GGAGATTCTGGGTGCCGTGGCGGCATGCTGGATCAATGTGGTGGATGAAG
AGGTCGCAGAGCGAGGGAAAGAGGGCGAAAAGGAAGATTTGACTAAACTG
AAGATGCAGCTGAAGGGCGTGGTCTATTTGCTGAGAATGGCTTTGCAGAA
CCCAGATGAGGAGGTTGCTGAGGATGAAGGGGCGGTTGAAGCGAAGGAGG
GATTCGCGAAGGAGATGGAACAGTTGGTTGGTGCTGATGAGGCATTGAGG
GAATTGCTGCTTGGGAAAGTAGATGGGAAGGATGGAAGATATTTCGGTGC
TTGAAACAGAGGAAAGCTCTTATGCATGAAGATAAGCTGAGATCATCACT
ATCAATCTCCGTGATTGCAGCCTTGGGCTCTCTGTTTCCGATGCATAAAG
CAGCAGATGTGCCAAACATCGTTCTCGCACTGGCAAGCTTCACCTCCGAA
GCCGACCCATGGACGACAGACGAGTCACGCACAGCGTCAACTGCAATTCT
TGAGAGGTTTCGCACAACATCACCCTCGACACCAGATGCATCGTTCTGGG
TTGTCCTTGAAACCATCCTCAAGGACAAAATCCGACCTCTTTTCACAAGA
ACCAGAAATCCTGCTATCACAGCAGCAGGTCGCAAGGACATGCACCCCAT
CCCACTTCCTAGATTTGATACCAGCATTCTTGACCCCGAGTCGAAACCAT
GGCGATCGTCAGACGTCTACGCGACGACCGTCTTTTCCTGGATCGTAACA
CAATATCAGGCATCTGAAAACCTGTTTCTTGCTCGGGAGTGCCTGAGACT
TCGAAACTCTGAGGAATTATCCGAGTCCGATACCGCGGCAGCAAACCACA
TCTATGCCTGGGCGAGTCAGCATGCCCTTCCATCTGCGGTGTATGCGGAA
TCGATTGAAGAGCCCAGTGATGTCAGTGGAAGACCTACGAACGGCGGCGC
GTGAGTGCCTACGCCGCGGTGATGCGCGCATCCCAGACTCGATGCTGGAC
AAGCTCGTCGTCCCTGGAGAATTGGAGCGTTTATGGGACACCGTCTCAGC
CCACGAGGACACAGACAATGCAGCTGCAAACGACATCAGCCGTCTAGAAT
CCCACTTCCCTCTCCTCGTCCCACCAATTCTCGCCTTAATTGACGATGAG
ACCAACCCCCACAAAGCCGACGGCTGCACACTTCTCACCCACCTTTTACA
CCCCATTCAGCAAGCCAAATCAGATATACTTAAACGCACCAACCTCTCCT
CTGTCTTCATCGACGCCATCAAACCCTGCCTCCTCTCCCTACCTACCATA
ACCCCCGAGTCCGATTCCATCCGTCTCCTAGGCACAGCTTATCCAACTCT
CTTCTTACTTCTCAAAACTAGCTACTTACCAAGTGATAAACAAACCTACA
CCGCCGAGCTGACGAAAGTCCTTCGCGAGAACCTCATCTCCTCCTTCCAC
CACATTAGCACCATGACTCCCTCCAGTGGGACGCAATCTACGCTATCCTC
GTTCCCGCATCCGAGATTATCTACTCTTTTGTTGAACAAAATACACGACA
TTCTCTTCGATCTCGCGGTTCACACAACAAAATACCTACAGGAAATAATT
CCGCTCATCTACAGTACACTGTCTAACCCCTTCGGGACAGCCTATTCACC
TCTCCTATTGGCGGGAGTGGCTGTTACCAGGGCTGTGATTCTGAATGCAC
ACCCGAGGATTTGGCGTTGGAGGGGGGAGATTCTGGGTGCCGTGGCGGCA
TGCTGGATCAATGTGGTGGATGAAGAGGTCGCAGAGCGAGGGAAAGAGGG
CGAAAAGGAAGATTTGACTAAACTGAAGATGCAGCTGAAGGGCGTGGTCT
ATTTGCTGAGAATGGCTTTGCAGAACCCAGATGAGGAGGTTGCTGAGGAT
GAAGGGGCGGTTGAAGCGAAGGAGGGATTCGCGAAGGAGATGGAACAGTT
GGTTGGTGCTGATGAGGCATTGAGGGAATTGCTGCTTGGGAAAGTAGATG
GGAAGGATGGAAGATATTTCGGTGCTTGAAACAGAGGAAAGCTCTTATGC
ATGAAGATAAGCTGAGATCATCACTATCAATCTCCGTGATTGCAGCCTTG
GGCTCTCTGTTTCCGATGCATAAAGCAGCAGATGTGCCAAACATCGTTCT
CGCACTGGCAAGCTTCACCTCCGAAGCCGACCCATGGACGACAGACGAGT
CACGCACAGCGTCAACTGCAATTCTTGAGAGGTTTCGCACAACATCACCC
TCGACACCAGATGCATCGTTCTGGGTTGTCCTTGAAACCATCCTCAAGGA
CAAAATCCGACCTCTTTTCACAAGAACCAGAAATCCTGCTATCACAGCAG
CAGGTCGCAAGGACATGCACCCCATCCCACTTCCTAGATTTGATACCAGC
ATTCTTGACCCCGAGTCGAAACCATGGCGATCGTCAGACGTCTACGCGAC
GACCGTCTTTTCCTGGATCGTAACACAATATCAGGCATCTGAAAACCTGT
TTCTTGCTCGGGAGTGCCTGAGACTTCGAAACTCTGAGGAATTATCCGAG
TCCGATACCGCGGCAGCAAACCACATCTATGCCTGGGCGAGTCAGCATGC
CCTTCCATCTGCGGTGTATGCGGAATCGATTGAAGAGCCCAGTGATGTCA
GTGGAAGACCTACGAACGGCGGCGCGTGAGTGCCTACGCCGCGGTGATGC
GCGCATCCCAGACTCGATGCTGGACAAGCTCGTCGTCCCTGGAGAATTGG
AGCGTTTATGGGACACCGTCTCAGCCCACGAGGACACAGACAATGCAGCT
GCAAACGACATCAGCCGTCTAGAATCCCACTTCCCTCTCCTCGTCCCACC
AATTCTCGCCTTAATTGACGATGAGACCAACCCCCACAAAGCCGACGGCT
GCACACTTCTCACCCACCTTTTACACCCCATTCAGCAAGCCAAATCAGAT
ATACTTAAACGCACCAACCTCTCCTCTGTCTTCATCGACGCCATCAAACC
CTGCCTCCTCTCCCTACCTACCATAACCCCCGAGTCCGATTCCATCCGTC
TCCTAGGCACAGCTTATCCAACTCTCTTCTTACTTCTCAAAACTAGCTAC
TTACCAAGTGATAAACAAACCTACACCGCCGAGCTGACGAAAGTCCTTCG
CGAGAACCTCATCTCCTCCTTCCACCACATTAGCACCATGACTCCCTCCA
GTGGGACGCAATCTACGCTATCCTCGTTCCCGCATCCGAGATTATCTACT
CTTTTGTTGAACAAAATACACGACATTCTCTTCGATCTCGCGGTTCACAC
AACAAAATACCTACAGGAAATAATTCCGCTCATCTACAGTACACTGTCTA
ACCCCTTCGGGACAGCCTATTCACCTCTCCTATTGGCGGGAGTGGCTGTT
ACCAGGGCTGTGATTCTGAATGCACACCCGAGGATTTGGCGTTGGAGGGG
GGAGATTCTGGGTGCCGTGGCGGCATGCTGGATCAATGTGGTGGATGAAG
AGGTCGCAGAGCGAGGGAAAGAGGGCGAAAAGGAAGATTTGACTAAACTG
AAGATGCAGCTGAAGGGCGTGGTCTATTTGCTGAGAATGGCTTTGCAGAA
CCCAGATGAGGAGGTTGCTGAGGATGAAGGGGCGGTTGAAGCGAAGGAGG
GATTCGCGAAGGAGATGGAACAGTTGGTTGGTGCTGATGAGGCATTGAGG
GAATTGCTGCTTGGGAAAGTAGATGGGAAGGATGGAAGATATTTCGGTGC
TTGAAACAGAGGAAAGCTCTTATGCATGAAGATAAGCTGAGATCATCACT
ATCAATCTCCGTGATTGCAGCCTTGGGCTCTCTGTTTCCGATGCATAAAG
CAGCAGATGTGCCAAACATCGTTCTCGCACTGGCAAGCTTCACCTCCGAA
GCCGACCCATGGACGACAGACGAGTCACGCACAGCGTCAACTGCAATTCT
TGAGAGGTTTCGCACAACATCACCCTCGACACCAGATGCATCGTTCTGGG
TTGTCCTTGAAACCATCCTCAAGGACAAAATCCGACCTCTTTTCACAAGA
ACCAGAAATCCTGCTATCACAGCAGCAGGTCGCAAGGACATGCACCCCAT
CCCACTTCCTAGATTTGATACCAGCATTCTTGACCCCGAGTCGAAACCAT
GGCGATCGTCAGACGTCTACGCGACGACCGTCTTTTCCTGGATCGTAACA
CAATATCAGGCATCTGAAAACCTGTTTCTTGCTCGGGAGTGCCTGAGACT
TCGAAACTCTGAGGAATTATCCGAGTCCGATACCGCGGCAGCAAACCACA
TCTATGCCTGGGCGAGTCAGCATGCCCTTCCATCTGCGGTGTATGCGGAA
TCGATTGAAGAGCCCAGTGATGTCAGTGGAAGACCTACGAACGGCGGCGC
GTGAGTGCCTACGCCGCGGTGATGCGCGCATCCCAGACTCGATGCTGGAC
AAGCTCGTCGTCCCTGGAGAATTGGAGCGTTTATGGGACACCGTCTCAGC
CCACGAGGACACAGACAATGCAGCTGCAAACGACATCAGCCGTCTAGAAT
CCCACTTCCCTCTCCTCGTCCCACCAATTCTCGCCTTAATTGACGATGAG
ACCAACCCCCACAAAGCCGACGGCTGCACACTTCTCACCCACCTTTTACA
CCCCATTCAGCAAGCCAAATCAGATATACTTAAACGCACCAACCTCTCCT
CTGTCTTCATCGACGCCATCAAACCCTGCCTCCTCTCCCTACCTACCATA
ACCCCCGAGTCCGATTCCATCCGTCTCCTAGGCACAGCTTATCCAACTCT
CTTCTTACTTCTCAAAACTAGCTACTTACCAAGTGATAAACAAACCTACA
CCGCCGAGCTGACGAAAGTCCTTCGCGAGAACCTCATCTCCTCCTTCCAC
CACATTAGCACCATGACTCCCTCCAGTGGGACGCAATCTACGCTATCCTC
GTTCCCGCATCCGAGATTATCTACTCTTTTGTTGAACAAAATACACGACA
TTCTCTTCGATCTCGCGGTTCACACAACAAAATACCTACAGGAAATAATT
CCGCTCATCTACAGTACACTGTCTAACCCCTTCGGGACAGCCTATTCACC
TCTCCTATTGGCGGGAGTGGCTGTTACCAGGGCTGTGATTCTGAATGCAC
ACCCGAGGATTTGGCGTTGGAGGGGGGAGATTCTGGGTGCCGTGGCGGCA
TGCTGGATCAATGTGGTGGATGAAGAGGTCGCAGAGCGAGGGAAAGAGGG
CGAAAAGGAAGATTTGACTAAACTGAAGATGCAGCTGAAGGGCGTGGTCT
ATTTGCTGAGAATGGCTTTGCAGAACCCAGATGAGGAGGTTGCTGAGGAT
GAAGGGGCGGTTGAAGCGAAGGAGGGATTCGCGAAGGAGATGGAACAGTT
GGTTGGTGCTGATGAGGCATTGAGGGAATTGCTGCTTGGGAAAGTAGATG
GGAAGGATGGAAGATATTTCGGTGCTTGAAACAGAGGAAAGCTCTTATGC
ATGAAGATAAGCTGAGATCATCACTATCAATCTCCGTGATTGCAGCCTTG
GGCTCTCTGTTTCCGATGCATAAAGCAGCAGATGTGCCAAACATCGTTCT
CGCACTGGCAAGCTTCACCTCCGAAGCCGACCCATGGACGACAGACGAGT
CACGCACAGCGTCAACTGCAATTCTTGAGAGGTTTCGCACAACATCACCC
TCGACACCAGATGCATCGTTCTGGGTTGTCCTTGAAACCATCCTCAAGGA
CAAAATCCGACCTCTTTTCACAAGAACCAGAAATCCTGCTATCACAGCAG
CAGGTCGCAAGGACATGCACCCCATCCCACTTCCTAGATTTGATACCAGC
ATTCTTGACCCCGAGTCGAAACCATGGCGATCGTCAGACGTCTACGCGAC
GACCGTCTTTTCCTGGATCGTAACACAATATCAGGCATCTGAAAACCTGT
TTCTTGCTCGGGAGTGCCTGAGACTTCGAAACTCTGAGGAATTATCCGAG
TCCGATACCGCGGCAGCAAACCACATCTATGCCTGGGCGAGTCAGCATGC
CCTTCCATCTGCGGTGTATGCGGAATCGATTGAAGAGCCCAGTGATGTCA
GTGGAAGACCTACGAACGGCGGCGCGTGAGTGCCTACGCCGCGGTGATGC
GCGCATCCCAGACTCGATGCTGGACAAGCTCGTCGTCCCTGGAGAATTGG
AGCGTTTATGGGACACCGTCTCAGCCCACGAGGACACAGACAATGCAGCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009146-T1.utr3p1 | KJC3_009146-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009146-T1.utr5p1 | KJC3_009146-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR018870 |
| DBxref | PFAM:PF10521 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4680725..4682800 - |
|
