|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4685579..4687934+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009148-T1 ID=KJC3_009148-T1|Name=KJC3_009148-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2356bp|location=Sequence derived from alignment at ch6:4685579..4687934+ (Aspergillus niger KJC3)
ATGACATCGCCCGGAGATGCGGCTCCGGTCAAGCCTCCGCCGTCATTCTC
GCCCGGCGTACCACGTGTCGCATCCAAGTCAAGATATCCAAATCAGCGCC
GCGACTCGTCACCGGCCCTCGATGCAGACCTGGTAGACTCGAGGATCCGA
TCCCCGACCCCGCCCCTGACGGCCACGACGGCAGAACTTCCGATTAGGTC
CGCATCACCTCGTGCTCCTTCTTTCCGATCGTCGACTCCACAATTAGCTC
GATCATCCCTGGGATCGCCGGTAGAAGGTCGTTTCGACGGCGCAGAGGAA
ATTCGATCTTTAATCATACGCTCGTTCTCCCCCGTGGTTGGGGTATACGC
ATCAGCGGACACCGATGAGTTGGTGCGACAGAAAGGCTTCGCTGGTGGGT
TCTGGGAGTTGATTCGCCCTTTCGGCGAGAATGTACCAGGCAAGTTGGTC
ATTAGGGACAGCGTGGGGTCGAGTCGTGGCTGGGAAGACTACGGGGTTCG
CTTCGTGAACTTGGCCAGCAACATCTCGCCCCCTACCAACTCGAACTCAG
GGCGAAGCCCCTCCCTGGCACAGGTGGAAGAAGTCTTGGAGAAGCAATTG
GGCTCGACAGATGATCCGCTGGGCGGATCAATGCGGCCCATAAATTTCTT
AAGTTTTCCTACAACATCCCCTTTATACAAAGTATATCTTCGACACCTTC
TGTCGATATCTTCGGCAACGCCGCATGAAACCTTTCGACATCCAGTGGCC
AGCGTCATTGCTATTAGCTCACGCAATACTGCCCCGCTTGAAACTCTCAG
GCAACTGTATGCGGATACGAGCAATGGGCCTCGGAGGTTGCCAGACTGGT
GTCACCCTGAATACCTCCGGTACTACGTGCTCGTGCATGACGAGGATCGG
GATGATATTGCCGAATCAACCAAGCTTTACGACCAAATGAAGCGCCATTT
CGGGTTGCATTGTCACTTGTTGAGGCTGCGCAGCAATCAGTGCGTGGTCA
CCGATGATGATAGTGTCCGAGTTCCTGAATGCGAGTGGCTTTCGCCTCCA
GAGCGACTTTCGGGTGGAGCTGGTACGACTAGACCCCTGCATTTACATTC
CCGCAAGCACTAACGAACAACAGAGCCTTTGGTTGACCTGGATACTAATG
GTCTTTACCTTTTCGACTCCGATATTATGGCAATCAAAGCCTTTATTCGA
GAGCTAGTTGCGCAGTCCGTAATACCGTTCATGGAAAACCGAGTCGCTGT
CTGGAATGACCAGGTGGCCTCCCGTAGGCGTGGTATCAGTGGTCGATTCA
TGTCAATGTCACGGAGATGGGCCGGATTCGGAACTGGCTCTCGTTCCAGC
CTTACATCGGGAGGGGCCAGCGGAAACTACGATGTCGCCCACGGTTATTA
TAGGCCAGACACGCCTGAAGCTCTGCTGCGCAAAATGGCTGATTTCGCGT
TCATGCTCCGCGACTGGAAGTTGTCCGCATCTACGTACGAGCTTCTTCGG
TCGGACTATGCGAACGACAAGGCTTGGAAATATCATGCGGGTACCTACGA
GATGTGTGCCGTCAGCATGCTTCTTAACCCTGCCGCAATGGGGACCAAGG
TCAAGCTCGACGGAATCGATCAGATGTTCGACACGGCATGTTATTCGTAT
CTTACAAGGTGCTCGGACGCACCTAATGCACTTCGTTGCCTAACGTTAGC
TATGGAATTGTTGAAGTCTCGCGGGGGTTCGGCAGTGGAAAGCGCCGCTC
GATGGGCCATGCGGGCCATGGACCTTGGGCTAGTGGGATCTATCGGTCAG
GGCCTATTCAGTGAGCGTGTGTCGGCATGCTATGCGGCGAGGTCACCGGT
GAGCGGAATGAAATGGGGCTCTCGACGTAGGAAAGCTGGGATGTGGAGTG
TATTTGCCGCCGATACGTGGCTTCGTCTGGGAAAGCCATCACTAGCATCG
GCAGCTCTCGAGGAGGCGGAGCGGCTATATGCAGATGTATTGGATAGCGA
TGGAGGATTTCCGATGCCCGAGATGCAGACGTTCGTTGACAACCTGCGAC
ACGCTGTCAAGGTCGAGTACCTTGAAGCCCGGGGGCTAGATACGAGGGAT
GAGGCAGCCACTGCCGAAGCACTGGGCACGGAGGAAATCAGCGAGAAGCT
GGACCGACGCATGAATCGCAAGTCTTTGATCTCGAATCCGTTGGACTCGG
GCGGTCTTGGTCCGGCGCAAGGCACGAGAGATGATGACAATGCAGCCAAT
GACGACTTCGAACGAGCTTAGGGACGCAATTATGGTGCGACGGGCGCATA
GGTTCATACAATATAATAGACATGTGTCAATTAATGTTTCTCTACGTGTT
TACGCT back to topCoding sequence (CDS) from alignment at ch6:4685579..4687934+ >KJC3_009148-T1 ID=KJC3_009148-T1|Name=KJC3_009148-T1|organism=Aspergillus niger KJC3|type=CDS|length=4440bp|location=Sequence derived from alignment at ch6:4685579..4687934+ (Aspergillus niger KJC3)
ATGACATCGCCCGGAGATGCGGCTCCGGTCAAGCCTCCGCCGTCATTCTC
GCCCGGCGTACCACGTGTCGCATCCAAGTCAAGATATCCAAATCAGCGCC
GCGACTCGTCACCGGCCCTCGATGCAGACCTGGTAGACTCGAGGATCCGA
TCCCCGACCCCGCCCCTGACGGCCACGACGGCAGAACTTCCGATTAGGTC
CGCATCACCTCGTGCTCCTTCTTTCCGATCGTCGACTCCACAATTAGCTC
GATCATCCCTGGGATCGCCGGTAGAAGGTCGTTTCGACGGCGCAGAGGAA
ATTCGATCTTTAATCATACGCTCGTTCTCCCCCGTGGTTGGGGTATACGC
ATCAGCGGACACCGATGAGTTGGTGCGACAGAAAGGCTTCGCTGGTGGGT
TCTGGGAGTTGATTCGCCCTTTCGGCGAGAATGTACCAGGCAAGTTGGTC
ATTAGGGACAGCGTGGGGTCGAGTCGTGGCTGGGAAGACTACGGGGTTCG
CTTCGTGAACTTGGCCAGCAACATCTCGCCCCCTACCAACTCGAACTCAG
GGCGAAGCCCCTCCCTGGCACAGGTGGAAGAAGTCTTGGAGAAGCAATTG
GGCTCGACAGATGATCCGCTGGGCGGATCAATGCGGCCCATAAATTTCTT
AAGTTTTCCTACAACATCCCCTTTATACAAAGTATATCTTCGACACCTTC
TGTCGATATCTTCGGCAACGCCGCATGAAACCTTTCGACATCCAGTGGCC
AGCGTCATTGCTATTAGCTCACGCAATACTGCCCCGCTTGAAACTCTCAG
GCAACTGTATGCGGATACGAGCAATGGGCCTCGGAGGTTGCCAGACTGGT
GTCACCCTGAATACCTCCGGTACTACGTGCTCGTGCATGACGAGGATCGG
GATGATATTGCCGAATCAACCAAGCTTTACGACCAAATGAAGCGCCATTT
CGGGTTGCATTGTCACTTGTTGAGGCTGCGCAGCAATCAGTGCGTGGTCA
CCGATGATGATAGTGTCCGAGTTCCTGAATGCGAGTGGCTTTCGCCTCCA
GAGCGACTTTCGGGTGGAGCTGAGCCTTTGGTTGACCTGGATACTAATGG
TCTTTACCTTTTCGACTCCGATATTATGGCAATCAAAGCCTTTATTCGAG
AGCTAGTTGCGCAGTCCGTAATACCGTTCATGGAAAACCGAGTCGCTGTC
TGGAATGACCAGGTGGCCTCCCGTAGGCGTGGTATCAGTGGTCGATTCAT
GTCAATGTCACGGAGATGGGCCGGATTCGGAACTGGCTCTCGTTCCAGCC
TTACATCGGGAGGGGCCAGCGGAAACTACGATGTCGCCCACGGTTATTAT
AGGCCAGACACGCCTGAAGCTCTGCTGCGCAAAATGGCTGATTTCGCGTT
CATGCTCCGCGACTGGAAGTTGTCCGCATCTACGTACGAGCTTCTTCGGT
CGGACTATGCGAACGACAAGGCTTGGAAATATCATGCGGGTACCTACGAG
ATGTGTGCCGTCAGCATGCTTCTTAACCCTGCCGCAATGGGGACCAAGGT
CAAGCTCGACGGAATCGATCAGATGTTCGACACGGCATGTTATTCGTATC
TTACAAGGTGCTCGGACGCACCTAATGCACTTCGTTGCCTAACGTTAGCT
ATGGAATTGTTGAAGTCTCGCGGGGGTTCGGCAGTGGAAAGCGCCGCTCG
ATGGGCCATGCGGGCCATGGACCTTGGGCTAGTGGGATCTATCGGTCAGG
GCCTATTCAGTGAGCGTGTGTCGGCATGCTATGCGGCGAGGTCACCGGTG
AGCGGAATGAAATGGGGCTCTCGACGTAGGAAAGCTGGGATGTGGAGTGT
ATTTGCCGCCGATACGTGGCTTCGTCTGGGAAAGCCATCACTAGCATCGG
CAGCTCTCGAGGAGGCGGAGCGGCTATATGCAGATGTATTGGATAGCGAT
GGAGGATTTCCGATGCCCGAGATGCAGACGTTCGTTGACAACCTGCGACA
CGCTGTCAAGGTCGAGTACCTTGAAGCCCGGGGGCTAGATACGAGGGATG
AGGCAGCCACTGCCGAAGCACTGGGCACGGAGGAAATCAGCGAGAAGCTG
GACCGACGCATGAATCGCAAGTCTTTGATCTCGAATCCGTTGGACTCGGG
CGGTCTTGGTCCGGCGCAAGGCACGAGAGATGATGACAATGCAGCCAATG
ACGACTTCGAACGAGCTTAGATGACATCGCCCGGAGATGCGGCTCCGGTC
AAGCCTCCGCCGTCATTCTCGCCCGGCGTACCACGTGTCGCATCCAAGTC
AAGATATCCAAATCAGCGCCGCGACTCGTCACCGGCCCTCGATGCAGACC
TGGTAGACTCGAGGATCCGATCCCCGACCCCGCCCCTGACGGCCACGACG
GCAGAACTTCCGATTAGGTCCGCATCACCTCGTGCTCCTTCTTTCCGATC
GTCGACTCCACAATTAGCTCGATCATCCCTGGGATCGCCGGTAGAAGGTC
GTTTCGACGGCGCAGAGGAAATTCGATCTTTAATCATACGCTCGTTCTCC
CCCGTGGTTGGGGTATACGCATCAGCGGACACCGATGAGTTGGTGCGACA
GAAAGGCTTCGCTGGTGGGTTCTGGGAGTTGATTCGCCCTTTCGGCGAGA
ATGTACCAGGCAAGTTGGTCATTAGGGACAGCGTGGGGTCGAGTCGTGGC
TGGGAAGACTACGGGGTTCGCTTCGTGAACTTGGCCAGCAACATCTCGCC
CCCTACCAACTCGAACTCAGGGCGAAGCCCCTCCCTGGCACAGGTGGAAG
AAGTCTTGGAGAAGCAATTGGGCTCGACAGATGATCCGCTGGGCGGATCA
ATGCGGCCCATAAATTTCTTAAGTTTTCCTACAACATCCCCTTTATACAA
AGTATATCTTCGACACCTTCTGTCGATATCTTCGGCAACGCCGCATGAAA
CCTTTCGACATCCAGTGGCCAGCGTCATTGCTATTAGCTCACGCAATACT
GCCCCGCTTGAAACTCTCAGGCAACTGTATGCGGATACGAGCAATGGGCC
TCGGAGGTTGCCAGACTGGTGTCACCCTGAATACCTCCGGTACTACGTGC
TCGTGCATGACGAGGATCGGGATGATATTGCCGAATCAACCAAGCTTTAC
GACCAAATGAAGCGCCATTTCGGGTTGCATTGTCACTTGTTGAGGCTGCG
CAGCAATCAGTGCGTGGTCACCGATGATGATAGTGTCCGAGTTCCTGAAT
GCGAGTGGCTTTCGCCTCCAGAGCGACTTTCGGGTGGAGCTGAGCCTTTG
GTTGACCTGGATACTAATGGTCTTTACCTTTTCGACTCCGATATTATGGC
AATCAAAGCCTTTATTCGAGAGCTAGTTGCGCAGTCCGTAATACCGTTCA
TGGAAAACCGAGTCGCTGTCTGGAATGACCAGGTGGCCTCCCGTAGGCGT
GGTATCAGTGGTCGATTCATGTCAATGTCACGGAGATGGGCCGGATTCGG
AACTGGCTCTCGTTCCAGCCTTACATCGGGAGGGGCCAGCGGAAACTACG
ATGTCGCCCACGGTTATTATAGGCCAGACACGCCTGAAGCTCTGCTGCGC
AAAATGGCTGATTTCGCGTTCATGCTCCGCGACTGGAAGTTGTCCGCATC
TACGTACGAGCTTCTTCGGTCGGACTATGCGAACGACAAGGCTTGGAAAT
ATCATGCGGGTACCTACGAGATGTGTGCCGTCAGCATGCTTCTTAACCCT
GCCGCAATGGGGACCAAGGTCAAGCTCGACGGAATCGATCAGATGTTCGA
CACGGCATGTTATTCGTATCTTACAAGGTGCTCGGACGCACCTAATGCAC
TTCGTTGCCTAACGTTAGCTATGGAATTGTTGAAGTCTCGCGGGGGTTCG
GCAGTGGAAAGCGCCGCTCGATGGGCCATGCGGGCCATGGACCTTGGGCT
AGTGGGATCTATCGGTCAGGGCCTATTCAGTGAGCGTGTGTCGGCATGCT
ATGCGGCGAGGTCACCGGTGAGCGGAATGAAATGGGGCTCTCGACGTAGG
AAAGCTGGGATGTGGAGTGTATTTGCCGCCGATACGTGGCTTCGTCTGGG
AAAGCCATCACTAGCATCGGCAGCTCTCGAGGAGGCGGAGCGGCTATATG
CAGATGTATTGGATAGCGATGGAGGATTTCCGATGCCCGAGATGCAGACG
TTCGTTGACAACCTGCGACACGCTGTCAAGGTCGAGTACCTTGAAGCCCG
GGGGCTAGATACGAGGGATGAGGCAGCCACTGCCGAAGCACTGGGCACGG
AGGAAATCAGCGAGAAGCTGGACCGACGCATGAATCGCAAGTCTTTGATC
TCGAATCCGTTGGACTCGGGCGGTCTTGGTCCGGCGCAAGGCACGAGAGA
TGATGACAATGCAGCCAATGACGACTTCGAACGAGCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009148-T1.utr3p1 | KJC3_009148-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260W8D |
| DBxref | InterPro:IPR024420 |
| DBxref | PFAM:PF12739 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4685579..4687934 + |
|
