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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4696822..4698593- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009153-T1 ID=KJC3_009153-T1|Name=KJC3_009153-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1772bp|location=Sequence derived from alignment at ch6:4696822..4698593- (Aspergillus niger KJC3)
ATGAATGTGACGGTGGATCCGGCTTGGCTGACGGAAACCGATGAGCCTCG
GCTCATCTCGCCGCCATCGGATTGGCATCCACCGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCACCTCCGCATTCTCTCCATCCTCCACCCAGTCCGCCCA
TCCCAACTGCTTCTTCCATTTGGGGCCAATGACTGGCGTCCTGTCCCCAT
CATGGAATACCTGCCTAGTCTGCAGCAAGAATTCGATGAGCTGAAGCCAT
CGCTGTTCGGTACGTGCCCTTGGCGCACACCCCAAGCTATGTCAACGAAC
ACTCGACTAACCCGCATCCCATCGCAGAGCTACTCGCCGAACAACAGCTG
TCCGACCTTTTGCCTCCCTCAATCCGATACATCCTTGCCGTCGCGACCCA
TCGCCATCCACGATATCTCCTTCGAATTCTCAACTCCTACGACGAGATCT
ACGCGCTGCTCTCCCTCGTCGTCGAACGCTACTACCTGCGCACCTTCGGC
GGCTCCTTCACAGAGAACTTCTACTCCCTCAAACGCGAACGAGTCCTCCT
CACCAAGAATGGCGAGATCCCTCGTGCCCAGCTGGGCGCTCCAGGCCCCG
TCCGCGAAGCCCTCAAGCTCCGCACCTCAGACGTCTGGAAGAACCTCCTC
GTCCTAGTCGGAATTCCCTACCTAAAGCGCAAGCTCGACGAAGGCTACGA
CATCCACGCCGCACCACAAGCATCCCTAATTATGAGCGGTGGCCCTCGAT
ACAACCCAGGCGATGACCTCCCTCATAATCCAACAATCCGCCAACGTCTC
CTCCACTACTACAAGTGGTTCCTCCGCAACATCTACCCCTCCGTCAACGC
CGCATACTACTTCTCCATCCTCGCCTTCAACCTCGCCTACCTCTTCGACA
ACACAAAATACTCCTCCCCCTTCCTCTGGCTCATCGGCACCCGCATCCGT
CGTCTCAGCTCCGCCGACCACCGCGCCATCGCCTCCATCCTCGACCCCAA
GCCCCCTCCCCCAGGTCCCGGTGGCGCAGGCGCCCGCACCCGCCCTGGCT
CCGGCCTCCTGGGCCTCCTCAGCCCGCAGAACTTCTACCCCCAACTTCTC
ACCTCTCTCCGCTACTTCCTCCCAGCTTCCATCTTCGCCCTCAAGTTCCT
CGAATGGTGGCACGCAAGTGACTTCTCGCGCCAGCTCGCCCGCAAAGCAA
CCGAGGTCCTGGACCTTCCTGCCCCTGTCGCAGCGGGAATGACGCCTCCC
TCGGAGAAGCGAAAGGCAGTCGCCGCGGCCGCAGCTACAGAGAAGCAACA
ACAGCAACAGCCATCATCCCCAACCCTCAAATCAGCATTAAAATCAGCCC
CTCCCGCGCGCACACGCATCCAACCGCCCATCTCAGCTACCTCCTACCTA
CCCATTTTCACAGTGCCACTTCCCCCACCGGATTCGGATGTCGCGTCCGC
GTGCCCGATCTGTTTGAATGCGCTTACGAACCCTACGGCGTGTCAGACGG
GGTATGTTTTTTGCTACGTGTGTATCTTCCACTGGTTGAATGGGGAGCAT
CAGCGACAATTGGATTTCATGAATGGGGAGGGCGCGGGCGCTGCGTGGGC
CGATGATGATTTGGAGGGAGGTGAGGAAGGGAAGCAGGGTGATGATGAGG
AGGAGGAGATGAAGAAGTCGAGGAGTAGACGGGGGAAGTGGGAGAGTGGG
AAGGGGAGGTGTCCGGTTACGGGGAGGAGGGTACTTGGTGGGACGGAGGG
GTTGAGGAGGGTGTTGGTGTAG back to topCoding sequence (CDS) from alignment at ch6:4696822..4698593- >KJC3_009153-T1 ID=KJC3_009153-T1|Name=KJC3_009153-T1|organism=Aspergillus niger KJC3|type=CDS|length=3408bp|location=Sequence derived from alignment at ch6:4696822..4698593- (Aspergillus niger KJC3)
AGCTACTCGCCGAACAACAGCTGTCCGACCTTTTGCCTCCCTCAATCCGA
TACATCCTTGCCGTCGCGACCCATCGCCATCCACGATATCTCCTTCGAAT
TCTCAACTCCTACGACGAGATCTACGCGCTGCTCTCCCTCGTCGTCGAAC
GCTACTACCTGCGCACCTTCGGCGGCTCCTTCACAGAGAACTTCTACTCC
CTCAAACGCGAACGAGTCCTCCTCACCAAGAATGGCGAGATCCCTCGTGC
CCAGCTGGGCGCTCCAGGCCCCGTCCGCGAAGCCCTCAAGCTCCGCACCT
CAGACGTCTGGAAGAACCTCCTCGTCCTAGTCGGAATTCCCTACCTAAAG
CGCAAGCTCGACGAAGGCTACGACATCCACGCCGCACCACAAGCATCCCT
AATTATGAGCGGTGGCCCTCGATACAACCCAGGCGATGACCTCCCTCATA
ATCCAACAATCCGCCAACGTCTCCTCCACTACTACAAGTGGTTCCTCCGC
AACATCTACCCCTCCGTCAACGCCGCATACTACTTCTCCATCCTCGCCTT
CAACCTCGCCTACCTCTTCGACAACACAAAATACTCCTCCCCCTTCCTCT
GGCTCATCGGCACCCGCATCCGTCGTCTCAGCTCCGCCGACCACCGCGCC
ATCGCCTCCATCCTCGACCCCAAGCCCCCTCCCCCAGGTCCCGGTGGCGC
AGGCGCCCGCACCCGCCCTGGCTCCGGCCTCCTGGGCCTCCTCAGCCCGC
AGAACTTCTACCCCCAACTTCTCACCTCTCTCCGCTACTTCCTCCCAGCT
TCCATCTTCGCCCTCAAGTTCCTCGAATGGTGGCACGCAAGTGACTTCTC
GCGCCAGCTCGCCCGCAAAGCAACCGAGGTCCTGGACCTTCCTGCCCCTG
TCGCAGCGGGAATGACGCCTCCCTCGGAGAAGCGAAAGGCAGTCGCCGCG
GCCGCAGCTACAGAGAAGCAACAACAGCAACAGCCATCATCCCCAACCCT
CAAATCAGCATTAAAATCAGCCCCTCCCGCGCGCACACGCATCCAACCGC
CCATCTCAGCTACCTCCTACCTACCCATTTTCACAGTGCCACTTCCCCCA
CCGGATTCGGATGTCGCGTCCGCGTGCCCGATCTGTTTGAATGCGCTTAC
GAACCCTACGGCGTGTCAGACGGGGTATGTTTTTTGCTACGTGTGTATCT
TCCACTGGTTGAATGGGGAGCATCAGCGACAATTGGATTTCATGAATGGG
GAGGGCGCGGGCGCTGCGTGGGCCGATGATGATTTGGAGGGAGGTGAGGA
AGGGAAGCAGGGTGATGATGAGGAGGAGGAGATGAAGAAGTCGAGGAGTA
GACGGGGGAAGTGGGAGAGTGGGAAGGGGAGGTGTCCGGTTACGGGGAGG
AGGGTACTTGGTGGGACGGAGGGGTTGAGGAGGGTGTTGGTGTAGATGAA
TGTGACGGTGGATCCGGCTTGGCTGACGGAAACCGATGAGCCTCGGCTCA
TCTCGCCGCCATCGGATTGGCATCCACCGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCACCTCCGCATTCTCTCCATCCTCCACCCAGTCCGCCCATCCCA
ACTGCTTCTTCCATTTGGGGCCAATGACTGGCGTCCTGTCCCCATCATGG
AATACCTGCCTAGTCTGCAGCAAGAATTCGATGAGCTGAAGCCATCGCTG
TTCGAGCTACTCGCCGAACAACAGCTGTCCGACCTTTTGCCTCCCTCAAT
CCGATACATCCTTGCCGTCGCGACCCATCGCCATCCACGATATCTCCTTC
GAATTCTCAACTCCTACGACGAGATCTACGCGCTGCTCTCCCTCGTCGTC
GAACGCTACTACCTGCGCACCTTCGGCGGCTCCTTCACAGAGAACTTCTA
CTCCCTCAAACGCGAACGAGTCCTCCTCACCAAGAATGGCGAGATCCCTC
GTGCCCAGCTGGGCGCTCCAGGCCCCGTCCGCGAAGCCCTCAAGCTCCGC
ACCTCAGACGTCTGGAAGAACCTCCTCGTCCTAGTCGGAATTCCCTACCT
AAAGCGCAAGCTCGACGAAGGCTACGACATCCACGCCGCACCACAAGCAT
CCCTAATTATGAGCGGTGGCCCTCGATACAACCCAGGCGATGACCTCCCT
CATAATCCAACAATCCGCCAACGTCTCCTCCACTACTACAAGTGGTTCCT
CCGCAACATCTACCCCTCCGTCAACGCCGCATACTACTTCTCCATCCTCG
CCTTCAACCTCGCCTACCTCTTCGACAACACAAAATACTCCTCCCCCTTC
CTCTGGCTCATCGGCACCCGCATCCGTCGTCTCAGCTCCGCCGACCACCG
CGCCATCGCCTCCATCCTCGACCCCAAGCCCCCTCCCCCAGGTCCCGGTG
GCGCAGGCGCCCGCACCCGCCCTGGCTCCGGCCTCCTGGGCCTCCTCAGC
CCGCAGAACTTCTACCCCCAACTTCTCACCTCTCTCCGCTACTTCCTCCC
AGCTTCCATCTTCGCCCTCAAGTTCCTCGAATGGTGGCACGCAAGTGACT
TCTCGCGCCAGCTCGCCCGCAAAGCAACCGAGGTCCTGGACCTTCCTGCC
CCTGTCGCAGCGGGAATGACGCCTCCCTCGGAGAAGCGAAAGGCAGTCGC
CGCGGCCGCAGCTACAGAGAAGCAACAACAGCAACAGCCATCATCCCCAA
CCCTCAAATCAGCATTAAAATCAGCCCCTCCCGCGCGCACACGCATCCAA
CCGCCCATCTCAGCTACCTCCTACCTACCCATTTTCACAGTGCCACTTCC
CCCACCGGATTCGGATGTCGCGTCCGCGTGCCCGATCTGTTTGAATGCGC
TTACGAACCCTACGGCGTGTCAGACGGGGTATGTTTTTTGCTACGTGTGT
ATCTTCCACTGGTTGAATGGGGAGCATCAGCGACAATTGGATTTCATGAA
TGGGGAGGGCGCGGGCGCTGCGTGGGCCGATGATGATTTGGAGGGAGGTG
AGGAAGGGAAGCAGGGTGATGATGAGGAGGAGGAGATGAAGAAGTCGAGG
AGTAGACGGGGGAAGTGGGAGAGTGGGAAGGGGAGGTGTCCGGTTACGGG
GAGGAGGGTACTTGGTGGGACGGAGGGGTTGAGGAGGGTGTTGGTGTAGA
TGAATGTGACGGTGGATCCGGCTTGGCTGACGGAAACCGATGAGCCTCGG
CTCATCTCGCCGCCATCGGATTGGCATCCACCGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCACCTCCGCATTCTCTCCATCCTCCACCCAGTCCGCCCAT
CCCAACTGCTTCTTCCATTTGGGGCCAATGACTGGCGTCCTGTCCCCATC
ATGGAATACCTGCCTAGTCTGCAGCAAGAATTCGATGAGCTGAAGCCATC
GCTGTTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR006845 |
| DBxref | InterPro:IPR001841 |
| DBxref | PFAM:PF04757 |
| Product | ubiquitin-protein ligase peroxin 12 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4696822..4698593 - |
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