You are here

Home

KJC3_009164-T1, KJC3_009164-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009164-T1
Unique NameKJC3_009164-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4732738..4734976+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009164-T1 ID=KJC3_009164-T1|Name=KJC3_009164-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2239bp|location=Sequence derived from alignment at ch6:4732738..4734976+ (Aspergillus niger KJC3)
TGGGCACGTTTTGGCCCTACAATGTACAGGGTAAATACGGGGGGTATTTG
GTAGGGGTGCACTCGGCCGTGCTCATCTCCTCACCGATTATTCAACTGGA
TGGAATGGAGCTGGGGGGCCTTAATTGACGTCACTAAAGGCCTTTTGAGA
CTCTACTAAGCTGGAGTTATTTCTGATTCTATTAACGCCTATCTCGCTCG
GTGCTTTTAACAGATTGACTCAGGGCAGGCTGACGAGCGGGGTAATCATA
ATACAGCCCCGATCTCTCCAGACACTCTGCGATCGACTTCTATACTCGTC
GGAACCCCAGGTATAGTATTCTTCTTATACCCCACCGTGCTAAGACCCCC
TAAGGTAAATCACCCCTTGTGGATACCAATATGGCTGCAGGTGAGCAATT
TGACTACATTATTGTCGGTGGTGGTACAGCCGGCTGTGTCCTAGCCTCAC
GGCTGAAGCAATACAACTCCTCTTTGTCGATCTTGCTTGTCGAAGCGGGG
CCCGATGCCAGCAATCACCCCCTCGTACCAGACGGAAGTAAAGCCACTCA
GTTACTTGGATCAGAGCTAGATTGGACATACGAGACAGTGCCGCAGAAGC
ATCTTCATGACCGCGTACTCTCAAACCATGCAGGAAAAGCTCTAGGTGGT
AGTACCACAATTAACAGCGGTGAGCCTTAATATTCATTCATCGAGGGTCT
GAACTTCAAGGAGGTGATGATGGACTTGGTGTGATATCGTACAGAGCTAA
TGGACCCTATACGGCGCGATTAGGCGGATGGATGCGAGGTGCAAAGGAAG
ATTATGACCTCTGGGCCAGCTTAGTCGGTGACTCTCGATGGAGCTACCAT
GGCCTCCTTCCTTACTTTCGGAAGCTTGAGCATCACTTCGATCCTTTTGC
CGACCCCGAAGTTCACGGGTTTGAAGGCCCTATCAAAACCGAGTCCGTGT
CCTCTACAGGCCGCAGATACCCTCTTCGTCAATTGGTGCAAGAGGTCTGG
AATTCCGTCGGTGTAACATATAACTCCAACATCAATTCCGGCAGTCCCTA
CGGGCTGGTTGAGGTTGTTGAGAATCGCGACCACGGGATGAGACAAATGT
CGAGCTCCGTTTATCCGCTAGACGTGGAGGTCATGACTGAAACCCTGGTC
AAACGAGTGCTGGTGGAGGAACGCGATGACCGACAGGTTGCAATAGGTGT
AGTGTTGGAGGATAAGGACGAAAGCCAGATTATTGCACGTCAAGAGGTAA
TCATATCTGCAGGTGCATATCGTACCCCTCAGCTCATGATGCTTTCGGGG
ATTGGCCCAGCGGAGGAATTGCGAGCCTATGGGATCGATATTGTTCTCGA
TCTTCCGGATGTAGGCCGTCACTTTGCGGACCATGTAGCAGTCTCTCAAT
GGTGGCAGTTGAAGCACCCGGAGAAGGGGCTAACAATCGGCTCACCCGCC
TTCACCGACCCAGCTTTCTTCCGAGGAAATCCCATTGACTTTGTGGCCTT
AGATTCAGTGCCCCTCGATGGCCTTCGTCAAGCGTTGGTCAAGGACGACC
CCAATTCTAACCCTGATGAGCATCCACTCATTGCCTCCCAGCGTGTGCAT
GTGGAAACATTCACAGTGTATGCGGCAGGAAACGCTCAGAACCCTACAAT
TGCAACAGATGGCACACATATCACGACCGGCGTATCCTGTATGCTTCCTA
CCTCTCGGGGCAGTATCAAGCTGGCAGATCGAGACATCCGAAGCGCGCCT
CGTATCGATCCTAATTACTGTGCTACCGAGGCTGATCGATATGTCCTGCG
TGAGGGGCTTCGGAAATTGCGAAAAGCCTTACGCGACACTTCAGCGGGTC
AGGAAATGATTAAATCAGAAACTGTCGAAGAAAATTATGATCCTTTAGGT
CCTGAAACAGATGATGAAGCTCTTGATGATCTCATTCGCCGTCGAGCTGC
GTAAGACCATCTTTGCTATGCTATACTACTTATTATTATGCGAGAGAGAA
TATTGCTGATGAGCATAGGACACTGTATCATCCTACGGGCGGTGCATGCA
TGGGCAAAGTGGTTGATGGTGATCTACGCGTCAAAGGGATCGATGGGTTG
CGAGTTGTCGACGCGAGCGTAATCCCGACTCCATTAAGCACACACATACA
GACATGTGTGTACGCGTTGGCTGAACAGGCGGCGAATATTATTTCTGGTG
TTTGTAGTGTTTAATGCTTACTATTGACACATAGCAGAC
back to top

Coding sequence (CDS) from alignment at ch6:4732738..4734976+

>KJC3_009164-T1 ID=KJC3_009164-T1|Name=KJC3_009164-T1|organism=Aspergillus niger KJC3|type=CDS|length=2940bp|location=Sequence derived from alignment at ch6:4732738..4734976+ (Aspergillus niger KJC3)
ATGGCTGCAGGTGAGCAATTTGACTACATTATTGTCGGTGGTGGTACAGC
CGGCTGTGTCCTAGCCTCACGGCTGAAGCAATACAACTCCTCTTTGTCGA
TCTTGCTTGTCGAAGCGGGGCCCGATGCCAGCAATCACCCCCTCGTACCA
GACGGAAGTAAAGCCACTCAGTTACTTGGATCAGAGCTAGATTGGACATA
CGAGACAGTGCCGCAGAAGCATCTTCATGACCGCGTACTCTCAAACCATG
CAGGAAAAGCTCTAGGTGGTAGTACCACAATTAACAGCGGCGGATGGATG
CGAGGTGCAAAGGAAGATTATGACCTCTGGGCCAGCTTAGTCGGTGACTC
TCGATGGAGCTACCATGGCCTCCTTCCTTACTTTCGGAAGCTTGAGCATC
ACTTCGATCCTTTTGCCGACCCCGAAGTTCACGGGTTTGAAGGCCCTATC
AAAACCGAGTCCGTGTCCTCTACAGGCCGCAGATACCCTCTTCGTCAATT
GGTGCAAGAGGTCTGGAATTCCGTCGGTGTAACATATAACTCCAACATCA
ATTCCGGCAGTCCCTACGGGCTGGTTGAGGTTGTTGAGAATCGCGACCAC
GGGATGAGACAAATGTCGAGCTCCGTTTATCCGCTAGACGTGGAGGTCAT
GACTGAAACCCTGGTCAAACGAGTGCTGGTGGAGGAACGCGATGACCGAC
AGGTTGCAATAGGTGTAGTGTTGGAGGATAAGGACGAAAGCCAGATTATT
GCACGTCAAGAGGTAATCATATCTGCAGGTGCATATCGTACCCCTCAGCT
CATGATGCTTTCGGGGATTGGCCCAGCGGAGGAATTGCGAGCCTATGGGA
TCGATATTGTTCTCGATCTTCCGGATGTAGGCCGTCACTTTGCGGACCAT
GTAGCAGTCTCTCAATGGTGGCAGTTGAAGCACCCGGAGAAGGGGCTAAC
AATCGGCTCACCCGCCTTCACCGACCCAGCTTTCTTCCGAGGAAATCCCA
TTGACTTTGTGGCCTTAGATTCAGTGCCCCTCGATGGCCTTCGTCAAGCG
TTGGTCAAGGACGACCCCAATTCTAACCCTGATGAGCATCCACTCATTGC
CTCCCAGCGTGTGCATGTGGAAACATTCACAGTGTATGCGGCAGGAAACG
CTCAGAACCCTACAATTGCAACAGATGGCACACATATCACGACCGGCGTA
TCCTGTATGCTTCCTACCTCTCGGGGCAGTATCAAGCTGGCAGATCGAGA
CATCCGAAGCGCGCCTCGTATCGATCCTAATTACTGTGCTACCGAGGCTG
ATCGATATGTCCTGCGTGAGGGGCTTCGGAAATTGCGAAAAGCCTTACGC
GACACTTCAGCGGGTCAGGAAATGATTAAATCAGAAACTGTCGAAGAAAA
TTATGATCCTTTAGGTCCTGAAACAGATGATGAAGCTCTTGATGATCTCA
TTCGCCGTCGAGCTGCGTAAATGGCTGCAGGTGAGCAATTTGACTACATT
ATTGTCGGTGGTGGTACAGCCGGCTGTGTCCTAGCCTCACGGCTGAAGCA
ATACAACTCCTCTTTGTCGATCTTGCTTGTCGAAGCGGGGCCCGATGCCA
GCAATCACCCCCTCGTACCAGACGGAAGTAAAGCCACTCAGTTACTTGGA
TCAGAGCTAGATTGGACATACGAGACAGTGCCGCAGAAGCATCTTCATGA
CCGCGTACTCTCAAACCATGCAGGAAAAGCTCTAGGTGGTAGTACCACAA
TTAACAGCGGCGGATGGATGCGAGGTGCAAAGGAAGATTATGACCTCTGG
GCCAGCTTAGTCGGTGACTCTCGATGGAGCTACCATGGCCTCCTTCCTTA
CTTTCGGAAGCTTGAGCATCACTTCGATCCTTTTGCCGACCCCGAAGTTC
ACGGGTTTGAAGGCCCTATCAAAACCGAGTCCGTGTCCTCTACAGGCCGC
AGATACCCTCTTCGTCAATTGGTGCAAGAGGTCTGGAATTCCGTCGGTGT
AACATATAACTCCAACATCAATTCCGGCAGTCCCTACGGGCTGGTTGAGG
TTGTTGAGAATCGCGACCACGGGATGAGACAAATGTCGAGCTCCGTTTAT
CCGCTAGACGTGGAGGTCATGACTGAAACCCTGGTCAAACGAGTGCTGGT
GGAGGAACGCGATGACCGACAGGTTGCAATAGGTGTAGTGTTGGAGGATA
AGGACGAAAGCCAGATTATTGCACGTCAAGAGGTAATCATATCTGCAGGT
GCATATCGTACCCCTCAGCTCATGATGCTTTCGGGGATTGGCCCAGCGGA
GGAATTGCGAGCCTATGGGATCGATATTGTTCTCGATCTTCCGGATGTAG
GCCGTCACTTTGCGGACCATGTAGCAGTCTCTCAATGGTGGCAGTTGAAG
CACCCGGAGAAGGGGCTAACAATCGGCTCACCCGCCTTCACCGACCCAGC
TTTCTTCCGAGGAAATCCCATTGACTTTGTGGCCTTAGATTCAGTGCCCC
TCGATGGCCTTCGTCAAGCGTTGGTCAAGGACGACCCCAATTCTAACCCT
GATGAGCATCCACTCATTGCCTCCCAGCGTGTGCATGTGGAAACATTCAC
AGTGTATGCGGCAGGAAACGCTCAGAACCCTACAATTGCAACAGATGGCA
CACATATCACGACCGGCGTATCCTGTATGCTTCCTACCTCTCGGGGCAGT
ATCAAGCTGGCAGATCGAGACATCCGAAGCGCGCCTCGTATCGATCCTAA
TTACTGTGCTACCGAGGCTGATCGATATGTCCTGCGTGAGGGGCTTCGGA
AATTGCGAAAAGCCTTACGCGACACTTCAGCGGGTCAGGAAATGATTAAA
TCAGAAACTGTCGAAGAAAATTATGATCCTTTAGGTCCTGAAACAGATGA
TGAAGCTCTTGATGATCTCATTCGCCGTCGAGCTGCGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0050660flavin adenine dinucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009164KJC3_009164Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009164-T1.utr5p1KJC3_009164-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009164-T1.exon1KJC3_009164-T1.exon1Aspergillus niger KJC3exon
KJC3_009164-T1.exon2KJC3_009164-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009164-T1.cdsKJC3_009164-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009164-T1.utr3p1KJC3_009164-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009164-T1KJC3_009164-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteCAZy:AA3_3
NoteCAZy:AA3_2
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR007867
DBxrefInterPro:IPR000172
DBxrefInterPro:IPR012132
DBxrefPFAM:PF00732
DBxrefPFAM:PF05199
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4732738..4734976 +
Powered by Drupal