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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4735636..4736834+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009165-T1 ID=KJC3_009165-T1|Name=KJC3_009165-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1199bp|location=Sequence derived from alignment at ch6:4735636..4736834+ (Aspergillus niger KJC3)
CTTTCTAATACTTAATCCAACTCCATTGCAATTCTTTGACTATTCCCATC
GCTGGTGAGTAATCCATTTACTAACTATTACACTTGCCTCTTGTTTTTCT
TGCCCTTCAATCCGCCATGAGGGTTGCGACAGAGCTCCCCCTTCGCATCC
TTACACACAACATCCGATATGCTACCTCTTCACCTTTCAAAGGTGAGCGC
CCCTGGGCGGACAGAGTACAGCTTCTCTTGAACGAGCTGCAGTACAACAC
ACGCCATGCGGAAGGCTTCATTTGTCTACAGGAAGTTTTACACAACCAGC
TGGGTGACATTCTCACTGGACTCAATGCTTCCAAGCAGAACAAAGCGTGG
GACTATATCGGCGTGGGACGAGATGACGGCTGCAAAGCAGGCGAATATTC
GCCTATCCTCTACCAGCCTTCGATCTGGCAACTTCGACACTGCGAGACTG
TCTGGTTATCTGAGACGCCCGGTACCCCGTCCAAGAGCTGGGATGCCGCA
TCGATCCGCATCGTGACCATCGGTGTCTTCACCCACCGCGCCAGTCGCAA
GACGATCTTGGCGATGAATACCCACCTGGACGATCAAGGGTCTCGGTCCC
GACTTGAAGCAGCCCATATTATCCTGCGCAAGTTGCAGGAGTATCGAACA
GGAAAAGCCTTTGGCCCCATAATCTCGGGGATGTTCCTAACTGGCGACTT
TAATAGCCAGGAGGACCAGGAGGCTTATACCGTCCTGACGGCGCCGGAGT
CACCTCTGGCAGACGCAGCGAAGTTGGTAAACCCCCAGGAGCATTACGGA
AACCAGAAAACCTGGACGGGATTTGGACATGAAGGGCAGGATCCGACGCG
CATTGACTACGTACTGCTCGAGTCAACGGCAGACAAGGTTCTTAGCCATG
GTCGTCAGCCATGGGCAGTGGAGGGCTATGCAGTATTGGCGAACCGATTC
GACGATGGGGTCTTTAACTCGGACCATCGAGCGGTGGTCATCGATGTGAT
GTTATACGACTAGTCACTAGTGTCAAGGCCCCATCAACTGGCTTTTTGTT
CCCCAGAATCTCCGAATGCTTCCAATACTTCCTGTAGGGATAGAAAGATC
GCGCATACATAGAGATGGACTTCAGGGAGGATCAGCCAGAAGTGGGAAGG
AACGAATTGATACGCATCCGTACCGATCCGAAGACCCGGTCAATCCACC back to topCoding sequence (CDS) from alignment at ch6:4735636..4736834+ >KJC3_009165-T1 ID=KJC3_009165-T1|Name=KJC3_009165-T1|organism=Aspergillus niger KJC3|type=CDS|length=897bp|location=Sequence derived from alignment at ch6:4735636..4736834+ (Aspergillus niger KJC3)
ATGAGGGTTGCGACAGAGCTCCCCCTTCGCATCCTTACACACAACATCCG
ATATGCTACCTCTTCACCTTTCAAAGGTGAGCGCCCCTGGGCGGACAGAG
TACAGCTTCTCTTGAACGAGCTGCAGTACAACACACGCCATGCGGAAGGC
TTCATTTGTCTACAGGAAGTTTTACACAACCAGCTGGGTGACATTCTCAC
TGGACTCAATGCTTCCAAGCAGAACAAAGCGTGGGACTATATCGGCGTGG
GACGAGATGACGGCTGCAAAGCAGGCGAATATTCGCCTATCCTCTACCAG
CCTTCGATCTGGCAACTTCGACACTGCGAGACTGTCTGGTTATCTGAGAC
GCCCGGTACCCCGTCCAAGAGCTGGGATGCCGCATCGATCCGCATCGTGA
CCATCGGTGTCTTCACCCACCGCGCCAGTCGCAAGACGATCTTGGCGATG
AATACCCACCTGGACGATCAAGGGTCTCGGTCCCGACTTGAAGCAGCCCA
TATTATCCTGCGCAAGTTGCAGGAGTATCGAACAGGAAAAGCCTTTGGCC
CCATAATCTCGGGGATGTTCCTAACTGGCGACTTTAATAGCCAGGAGGAC
CAGGAGGCTTATACCGTCCTGACGGCGCCGGAGTCACCTCTGGCAGACGC
AGCGAAGTTGGTAAACCCCCAGGAGCATTACGGAAACCAGAAAACCTGGA
CGGGATTTGGACATGAAGGGCAGGATCCGACGCGCATTGACTACGTACTG
CTCGAGTCAACGGCAGACAAGGTTCTTAGCCATGGTCGTCAGCCATGGGC
AGTGGAGGGCTATGCAGTATTGGCGAACCGATTCGACGATGGGGTCTTTA
ACTCGGACCATCGAGCGGTGGTCATCGATGTGATGTTATACGACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009165-T1.utr5p1 | KJC3_009165-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009165-T1.utr3p1 | KJC3_009165-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR005135 |
| DBxref | InterPro:IPR036691 |
| DBxref | PFAM:PF03372 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4735636..4736834 + |
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