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KJC3_009176-T2, KJC3_009176-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009176-T2
Unique NameKJC3_009176-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4763026..4765289-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009176-T2 ID=KJC3_009176-T2|Name=KJC3_009176-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2264bp|location=Sequence derived from alignment at ch6:4763026..4765289- (Aspergillus niger KJC3)
CCGTCTTGTCTTCCCCGAAACAACCTTCCAGATAAACCCCTCGACTGCAG
GAAGTAGACCGGCCGATAAGTTGCATAATCTGAAACGGTCAGGAGCTACT
GCTGGACCTTTATTCACGATGCAGTCAGGAATCTCAGGTACATATCTACC
AATCTCATTCCTCTCTTCTTCCCCTTGTTCCTGGCGATTACGACATCCCG
CAACCGATCCCCTCGGACATGCCACCTTACAACCCAAGTTACGCTCGTCC
CAGCATTCTTTGCTAACTATGCCCAATAGTCTCTGATGAGCTTCACGAAG
CCTTCAGGAACTTCGTCTCCGATGAATCCATTTTCTGTCTCCCCGTAACA
ATCAAGTCGGAAAGCCTGTCGCCCCTTTCCCCGGTTCCTTTCGCCTCTCC
GAACGCCTTCTACCCGTCTCTTTCCCAGCTCTCGTCCGTCCTTGAACCCA
AGACTCCCCTTTACCTCCTCATTCGTCGTCCTGAGGGTGGTTCATCCTCT
CTCGTGGCTTTGACCTACATTCCCTCCAATGCTGGCGTGCGCGCCAAGAC
TCTCTTCGCCGCAACCCGCGCCACCTTGGCTAGGGAACTAGGCACGGAGA
AGTTCGCTTCGACCATCTTCGCTACAGATGAAGATGAGGTTATTGGCGAG
GAGGCATGGAAGGAGCGAGATGCAGAGAAGAAGGGTACCGCGGGCGGTTT
CCGACGGGAGGATTTAATGGGCGAGAAGGAGCGGGAGTTGGAGGCTGTAC
GGAGAGCCGAAGAGGAGGCTCGCAGCGGCACTCCGAGCAGAGATATTGGT
ATTGGCGGCACGTTCAACAGGGCGAATCCATTCGGTGGTGCGTCCGTCAA
GATGAACGTCGATGATGAGGTTAAGCAGGCCCTCGAAGGGTTACAGCAGG
GTGGGCTGGTTCAGCTGGTACGTGTCTTCTCTCTACGGTTTTCCAACCCA
ACGCATTTGGGTATGTATATTTCCTTTGGGATTGCTCTAACTTCGCTTTT
CTAAATACAGGCCATCGATGTCCCGACGGAGGCGATCAAGGTTGCTGCCG
CTGAGTCCGGGGTGGATGCGAACTCCGTCCAGTCACACATCCCTTCGTCC
TCTCCCCGGTACACACTTTACCACTACCCCGACTCCGACGTGGTGATCTT
CATCTATACCTGCCCCTCGGGTTCCTCGATCAAGGAGCGTATGCTGTACG
CCAGTTCCCGAATGTATGCAATCACTATGGCTGGCGACCAGGGCTTGAAG
ATTTCAAAGAAGGTAAGAGCTGGTTGCAAACGCTCGATTGATTGAAGAGT
CTCCCTAACACAGCATGCAGATTGAGGCGTCATCGCCCGACGAGATCACG
GGCGAAAGGTTGCATGAAGAAGTCCACCCGCCACAGGACAACGGACCGAG
CCGGGGATTTGCGAGACCGAGACGCCCGGGTCGGTAAATCTCCGTGCGTG
GGTGGATGACCCCGTAATTTCTTGTATATCCCGCTCTATGATCCGCGATA
GTATATAGCCCCGGGCACCTGTGAACCGAAACACCGCCGGTACCATTCTT
CTCTCTCTTCCGTAGGTGTAGCTGTCTCATTCTCAACAACCGTTTATATT
CGCCCAAGCCACTCCCATAAATCTGCAGAGCTCCCTAAGGCCAGGAGCAT
ACGATGCAGATAGCAGCAAGTTCGCGTCCAAGAGTTCCCAAACGCGTGGC
GAACAAGAAAAACAACACCCAGCCAGCATCAATGATTTCGAAAACTTTTC
TTTTGGTAGAATAAATCTGTCCTCGAACTTCCCAGGTTTATAATCTTCGG
ACAGCCGTCCCGATCCTTCTCGAGTCGCGTGCACTCAAAGCAGTAAAAGG
CATCACTGATACCCTCTCCACCACAAACGATGCACTTGTTCTGGTAGTTT
CCGAAGGAGCACTCGTCGCAGATGCGGACCAGGGTCGTGGGACGCACGTA
GGAGTCGCACACGGGACATTTGCCGTCACACTTATCGCACAAGCGGCCGA
TAGAGATGCCGGGCTGCTTGCGGCACATGACAAGATCGGGATGATGGCGA
GACATGGTGGGTTTATGAGATCAGGAGCTTCTCTTGAAAGTGGTGGGAGA
CGCGACGACTCTTGAAGAACGATGGGCAACGCGAGATATAGAGTGAGAAG
TTCGCTAGCTAAAAGAAAGCTGCAGGTATTACGAGCAGTCGACGCTTCGT
AGCAATAGAATGAGATATGTCAGCAGCAAGACAGTGGAAGGCAATCGAAG
AGTCTGGGTCGGGG
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Coding sequence (CDS) from alignment at ch6:4763026..4765289-

>KJC3_009176-T2 ID=KJC3_009176-T2|Name=KJC3_009176-T2|organism=Aspergillus niger KJC3|type=CDS|length=2826bp|location=Sequence derived from alignment at ch6:4763026..4765289- (Aspergillus niger KJC3)
GCCATCGATGTCCCGACGGAGGCGATCAAGGTTGCTGCCGCTGAGTCCGG
GGTGGATGCGAACTCCGTCCAGTCACACATCCCTTCGTCCTCTCCCCGGT
ACACACTTTACCACTACCCCGACTCCGACGTGGTGATCTTCATCTATACC
TGCCCCTCGGGTTCCTCGATCAAGGAGCGTATGCTGTACGCCAGTTCCCG
AATGTATGCAATCACTATGGCTGGCGACCAGGGCTTGAAGATTTCAAAGA
AGGTAAGAGCTGGTTGCAAACGCTCGATTGATTGATCTCTGATGAGCTTC
ACGAAGCCTTCAGGAACTTCGTCTCCGATGAATCCATTTTCTGTCTCCCC
GTAACAATCAAGTCGGAAAGCCTGTCGCCCCTTTCCCCGGTTCCTTTCGC
CTCTCCGAACGCCTTCTACCCGTCTCTTTCCCAGCTCTCGTCCGTCCTTG
AACCCAAGACTCCCCTTTACCTCCTCATTCGTCGTCCTGAGGGTGGTTCA
TCCTCTCTCGTGGCTTTGACCTACATTCCCTCCAATGCTGGCGTGCGCGC
CAAGACTCTCTTCGCCGCAACCCGCGCCACCTTGGCTAGGGAACTAGGCA
CGGAGAAGTTCGCTTCGACCATCTTCGCTACAGATGAAGATGAGGTTATT
GGCGAGGAGGCATGGAAGGAGCGAGATGCAGAGAAGAAGGGTACCGCGGG
CGGTTTCCGACGGGAGGATTTAATGGGCGAGAAGGAGCGGGAGTTGGAGG
CTGTACGGAGAGCCGAAGAGGAGGCTCGCAGCGGCACTCCGAGCAGAGAT
ATTGGTATTGGCGGCACGTTCAACAGGGCGAATCCATTCGGTGGTGCGTC
CGTCAAGATGAACGTCGATGATGAGGTTAAGCAGGCCCTCGAAGGGTTAC
AGCAGGGTGGGCTGGTTCAGCTGATGCAGTCAGGAATCTCAGGCCATCGA
TGTCCCGACGGAGGCGATCAAGGTTGCTGCCGCTGAGTCCGGGGTGGATG
CGAACTCCGTCCAGTCACACATCCCTTCGTCCTCTCCCCGGTACACACTT
TACCACTACCCCGACTCCGACGTGGTGATCTTCATCTATACCTGCCCCTC
GGGTTCCTCGATCAAGGAGCGTATGCTGTACGCCAGTTCCCGAATGTATG
CAATCACTATGGCTGGCGACCAGGGCTTGAAGATTTCAAAGAAGGTAAGA
GCTGGTTGCAAACGCTCGATTGATTGATCTCTGATGAGCTTCACGAAGCC
TTCAGGAACTTCGTCTCCGATGAATCCATTTTCTGTCTCCCCGTAACAAT
CAAGTCGGAAAGCCTGTCGCCCCTTTCCCCGGTTCCTTTCGCCTCTCCGA
ACGCCTTCTACCCGTCTCTTTCCCAGCTCTCGTCCGTCCTTGAACCCAAG
ACTCCCCTTTACCTCCTCATTCGTCGTCCTGAGGGTGGTTCATCCTCTCT
CGTGGCTTTGACCTACATTCCCTCCAATGCTGGCGTGCGCGCCAAGACTC
TCTTCGCCGCAACCCGCGCCACCTTGGCTAGGGAACTAGGCACGGAGAAG
TTCGCTTCGACCATCTTCGCTACAGATGAAGATGAGGTTATTGGCGAGGA
GGCATGGAAGGAGCGAGATGCAGAGAAGAAGGGTACCGCGGGCGGTTTCC
GACGGGAGGATTTAATGGGCGAGAAGGAGCGGGAGTTGGAGGCTGTACGG
AGAGCCGAAGAGGAGGCTCGCAGCGGCACTCCGAGCAGAGATATTGGTAT
TGGCGGCACGTTCAACAGGGCGAATCCATTCGGTGGTGCGTCCGTCAAGA
TGAACGTCGATGATGAGGTTAAGCAGGCCCTCGAAGGGTTACAGCAGGGT
GGGCTGGTTCAGCTGATGCAGTCAGGAATCTCAGGCCATCGATGTCCCGA
CGGAGGCGATCAAGGTTGCTGCCGCTGAGTCCGGGGTGGATGCGAACTCC
GTCCAGTCACACATCCCTTCGTCCTCTCCCCGGTACACACTTTACCACTA
CCCCGACTCCGACGTGGTGATCTTCATCTATACCTGCCCCTCGGGTTCCT
CGATCAAGGAGCGTATGCTGTACGCCAGTTCCCGAATGTATGCAATCACT
ATGGCTGGCGACCAGGGCTTGAAGATTTCAAAGAAGGTAAGAGCTGGTTG
CAAACGCTCGATTGATTGATCTCTGATGAGCTTCACGAAGCCTTCAGGAA
CTTCGTCTCCGATGAATCCATTTTCTGTCTCCCCGTAACAATCAAGTCGG
AAAGCCTGTCGCCCCTTTCCCCGGTTCCTTTCGCCTCTCCGAACGCCTTC
TACCCGTCTCTTTCCCAGCTCTCGTCCGTCCTTGAACCCAAGACTCCCCT
TTACCTCCTCATTCGTCGTCCTGAGGGTGGTTCATCCTCTCTCGTGGCTT
TGACCTACATTCCCTCCAATGCTGGCGTGCGCGCCAAGACTCTCTTCGCC
GCAACCCGCGCCACCTTGGCTAGGGAACTAGGCACGGAGAAGTTCGCTTC
GACCATCTTCGCTACAGATGAAGATGAGGTTATTGGCGAGGAGGCATGGA
AGGAGCGAGATGCAGAGAAGAAGGGTACCGCGGGCGGTTTCCGACGGGAG
GATTTAATGGGCGAGAAGGAGCGGGAGTTGGAGGCTGTACGGAGAGCCGA
AGAGGAGGCTCGCAGCGGCACTCCGAGCAGAGATATTGGTATTGGCGGCA
CGTTCAACAGGGCGAATCCATTCGGTGGTGCGTCCGTCAAGATGAACGTC
GATGATGAGGTTAAGCAGGCCCTCGAAGGGTTACAGCAGGGTGGGCTGGT
TCAGCTGATGCAGTCAGGAATCTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_009176KJC3_009176Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009176-T2KJC3_009176-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009176-T2.cdsKJC3_009176-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009176-T2.utr3p1KJC3_009176-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009176-T2.exon3KJC3_009176-T2.exon3Aspergillus niger KJC3exon
KJC3_009176-T2.exon2KJC3_009176-T2.exon2Aspergillus niger KJC3exon
KJC3_009176-T2.exon1KJC3_009176-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009176-T2.utr5p1KJC3_009176-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029006
DBxrefInterPro:IPR002108
DBxrefPFAM:PF00241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4763026..4765289 -
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