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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4775533..4776708+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009181-T1 ID=KJC3_009181-T1|Name=KJC3_009181-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1176bp|location=Sequence derived from alignment at ch6:4775533..4776708+ (Aspergillus niger KJC3)
TGTTGACAAGCACCCCAGCATATAACCAACACATTTGGAGATGTCGTCAG
GGTCCAATGGTGCCAGGCGCGTAGCGTCGCTTTTGCGTATGTGCTTGTCA
ATCCGAAATTGAAAACCAATGCGTGTCCGTACTGACTCCCCCAGGGCCTG
CGATCTCCGATCCCAGAGTGTGCAGAAGCTGTCAAGAAACGCTTGTCCGC
CGCAGTTACGCCACAGCCTCTACACAGGCTTCCTCAGAAACTTCCTCCAC
CGCCGCATCAACCTTCCCCGTTGTGAAGCCCACCCATACCATCAAGGCCG
GCGTGGTCCTCTCCCGTCCCCCTCAAATCACGCGCGACCTTACCGATTTC
GAGAAGGCGTACTATTTCTACCAGAAGCGACTGAACGAGCGTCTCCAGTT
ACCTTTCACGAAATACTTCTACTTCAAGCGTGGAACGCCCGCCGACGAGG
ACTGGAAGCGCAAGATCCGCGAGCGTCAGACCCCCGCACGCGACATCGGC
AAGTACAACCCGTACTCGAAGGAGGCATGGAACGATGAACTCCTCGTTGG
AGCCGTCGAGTCGGACCCGGCCCACCAGGTGGAAATGCTTGTGCAGGATG
CGGAGTCGACGGTCAATGCCACTTCCCAGGATACTAGCAAGAAGGAAGAG
ATTCCGAGACCTTTCCCCCGGGTGACGGAGGCGGACCAGAAGAACGACCA
GAGAAGCCTCAACCGGGCACTGCAGAGGACTCTTTATCTCCTTGTGCAGT
CCAAGGAGGGATTCTGGACGTTTCCCAGCTCTCCCATCGTGGCTGAAGAG
ACTCTCCGTCAGGTAAGTTCCGCTGGCTCTTCTCGTCAAGTGTTTCACCA
GCGGCAGCAGCGCTAACGTTATTTGAAAATAGGCCGCCGAACGTACCCTT
GAGCAAGCCGCCGGTGTCAACATGAACACCTGGATGGTTGGATACCACCC
CGTGGGACACTACGTCTACAACTTCCGCAACCCGAACAAGCTGGCAACCG
GCCCCGCAGGCGAGAAGGTCTTCTTCATGAAGTCGCGCATCATGGCCGGC
CAGGCCGATCTTTCCGGAAACGCTCAGAACCTGACCGACTTCAAGTGGCT
GTCGAAGGATGAGATTTCCAAGTTCGTGCGGCCGCAGTACTACGCCAGCA
TCAAGAACATGCTGGCTGATCGGTAA back to topCoding sequence (CDS) from alignment at ch6:4775533..4776708+ >KJC3_009181-T1 ID=KJC3_009181-T1|Name=KJC3_009181-T1|organism=Aspergillus niger KJC3|type=CDS|length=3024bp|location=Sequence derived from alignment at ch6:4775533..4776708+ (Aspergillus niger KJC3)
ATGTCGTCAGGGTCCAATGGTGCCAGGCGCGTAGCGTCGCTTTTGCGGCC
TGCGATCTCCGATCCCAGAGTGTGCAGAAGCTGTCAAGAAACGCTTGTCC
GCCGCAGTTACGCCACAGCCTCTACACAGGCTTCCTCAGAAACTTCCTCC
ACCGCCGCATCAACCTTCCCCGTTGTGAAGCCCACCCATACCATCAAGGC
CGGCGTGGTCCTCTCCCGTCCCCCTCAAATCACGCGCGACCTTACCGATT
TCGAGAAGGCGTACTATTTCTACCAGAAGCGACTGAACGAGCGTCTCCAG
TTACCTTTCACGAAATACTTCTACTTCAAGCGTGGAACGCCCGCCGACGA
GGACTGGAAGCGCAAGATCCGCGAGCGTCAGACCCCCGCACGCGACATCG
GCAAGTACAACCCGTACTCGAAGGAGGCATGGAACGATGAACTCCTCGTT
GGAGCCGTCGAGTCGGACCCGGCCCACCAGGTGGAAATGCTTGTGCAGGA
TGCGGAGTCGACGGTCAATGCCACTTCCCAGGATACTAGCAAGAAGGAAG
AGATTCCGAGACCTTTCCCCCGGGTGACGGAGGCGGACCAGAAGAACGAC
CAGAGAAGCCTCAACCGGGCACTGCAGAGGACTCTTTATCTCCTTGTGCA
GTCCAAGGAGGGATTCTGGACGTTTCCCAGCTCTCCCATCGTGGCTGAAG
AGACTCTCCGTCAGGCCGCCGAACGTACCCTTGAGCAAGCCGCCGGTGTC
AACATGAACACCTGGATGGTTGGATACCACCCCGTGGGACACTACGTCTA
CAACTTCCGCAACCCGAACAAGCTGGCAACCGGCCCCGCAGGCGAGAAGG
TCTTCTTCATGAAGTCGCGCATCATGGCCGGCCAGGCCGATCTTTCCGGA
AACGCTCAGAACCTGACCGACTTCAAGTGGCTGTCGAAGGATGAGATTTC
CAAGTTCGTGCGGCCGCAGTACTACGCCAGCATCAAGAACATGCTGGCTG
ATCGGTAAATGTCGTCAGGGTCCAATGGTGCCAGGCGCGTAGCGTCGCTT
TTGCGGCCTGCGATCTCCGATCCCAGAGTGTGCAGAAGCTGTCAAGAAAC
GCTTGTCCGCCGCAGTTACGCCACAGCCTCTACACAGGCTTCCTCAGAAA
CTTCCTCCACCGCCGCATCAACCTTCCCCGTTGTGAAGCCCACCCATACC
ATCAAGGCCGGCGTGGTCCTCTCCCGTCCCCCTCAAATCACGCGCGACCT
TACCGATTTCGAGAAGGCGTACTATTTCTACCAGAAGCGACTGAACGAGC
GTCTCCAGTTACCTTTCACGAAATACTTCTACTTCAAGCGTGGAACGCCC
GCCGACGAGGACTGGAAGCGCAAGATCCGCGAGCGTCAGACCCCCGCACG
CGACATCGGCAAGTACAACCCGTACTCGAAGGAGGCATGGAACGATGAAC
TCCTCGTTGGAGCCGTCGAGTCGGACCCGGCCCACCAGGTGGAAATGCTT
GTGCAGGATGCGGAGTCGACGGTCAATGCCACTTCCCAGGATACTAGCAA
GAAGGAAGAGATTCCGAGACCTTTCCCCCGGGTGACGGAGGCGGACCAGA
AGAACGACCAGAGAAGCCTCAACCGGGCACTGCAGAGGACTCTTTATCTC
CTTGTGCAGTCCAAGGAGGGATTCTGGACGTTTCCCAGCTCTCCCATCGT
GGCTGAAGAGACTCTCCGTCAGGCCGCCGAACGTACCCTTGAGCAAGCCG
CCGGTGTCAACATGAACACCTGGATGGTTGGATACCACCCCGTGGGACAC
TACGTCTACAACTTCCGCAACCCGAACAAGCTGGCAACCGGCCCCGCAGG
CGAGAAGGTCTTCTTCATGAAGTCGCGCATCATGGCCGGCCAGGCCGATC
TTTCCGGAAACGCTCAGAACCTGACCGACTTCAAGTGGCTGTCGAAGGAT
GAGATTTCCAAGTTCGTGCGGCCGCAGTACTACGCCAGCATCAAGAACAT
GCTGGCTGATCGGTAAATGTCGTCAGGGTCCAATGGTGCCAGGCGCGTAG
CGTCGCTTTTGCGGCCTGCGATCTCCGATCCCAGAGTGTGCAGAAGCTGT
CAAGAAACGCTTGTCCGCCGCAGTTACGCCACAGCCTCTACACAGGCTTC
CTCAGAAACTTCCTCCACCGCCGCATCAACCTTCCCCGTTGTGAAGCCCA
CCCATACCATCAAGGCCGGCGTGGTCCTCTCCCGTCCCCCTCAAATCACG
CGCGACCTTACCGATTTCGAGAAGGCGTACTATTTCTACCAGAAGCGACT
GAACGAGCGTCTCCAGTTACCTTTCACGAAATACTTCTACTTCAAGCGTG
GAACGCCCGCCGACGAGGACTGGAAGCGCAAGATCCGCGAGCGTCAGACC
CCCGCACGCGACATCGGCAAGTACAACCCGTACTCGAAGGAGGCATGGAA
CGATGAACTCCTCGTTGGAGCCGTCGAGTCGGACCCGGCCCACCAGGTGG
AAATGCTTGTGCAGGATGCGGAGTCGACGGTCAATGCCACTTCCCAGGAT
ACTAGCAAGAAGGAAGAGATTCCGAGACCTTTCCCCCGGGTGACGGAGGC
GGACCAGAAGAACGACCAGAGAAGCCTCAACCGGGCACTGCAGAGGACTC
TTTATCTCCTTGTGCAGTCCAAGGAGGGATTCTGGACGTTTCCCAGCTCT
CCCATCGTGGCTGAAGAGACTCTCCGTCAGGCCGCCGAACGTACCCTTGA
GCAAGCCGCCGGTGTCAACATGAACACCTGGATGGTTGGATACCACCCCG
TGGGACACTACGTCTACAACTTCCGCAACCCGAACAAGCTGGCAACCGGC
CCCGCAGGCGAGAAGGTCTTCTTCATGAAGTCGCGCATCATGGCCGGCCA
GGCCGATCTTTCCGGAAACGCTCAGAACCTGACCGACTTCAAGTGGCTGT
CGAAGGATGAGATTTCCAAGTTCGTGCGGCCGCAGTACTACGCCAGCATC
AAGAACATGCTGGCTGATCGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009181-T1.utr5p1 | KJC3_009181-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263FAK |
| DBxref | InterPro:IPR015797 |
| DBxref | InterPro:IPR021757 |
| DBxref | PFAM:PF11788 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4775533..4776708 + |
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