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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4776892..4777727- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009182-T1 ID=KJC3_009182-T1|Name=KJC3_009182-T1|organism=Aspergillus niger KJC3|type=mRNA|length=836bp|location=Sequence derived from alignment at ch6:4776892..4777727- (Aspergillus niger KJC3)
GGCGTCATCATCCCTCCAATACTCTCCACCCAGCCAGAACTATCACACCC
ATCCATCTGCTATCCATACTCCCATCATCCATACTATTTCCACAACTCCC
CAAATTCTCATTATTCCCAATAATACCCCAGAGGATCAACAAAGAATAAA
TACCAAAAATGGTCTGCGCCAAATGCCAAAAGAAACTTAAACAAACGGAG
CTCGCCACTCCCGGCGTGAAACGCAAAGCAGAAATGTACTATGGCTCACC
ATCCACAACGCTCGGCGGTAGTAGCAATAGCAGTGGTGCTGCTTTTGCCG
GAGGGAAAGCCAAGTCTAGTACGTTGGGGAGTACGGGGGTTGGGAAGGTA
TATCCATCCATTTTATATTACTACTACTACTATATAACGTGATGATGAGG
AGGAGGATGCTAATAATGTATAGAGCAAACTCCTCAGTTCTAAAGCTAAG
AATCCCTACGCGGCGTATGCTTCCTCCTGTGAGGTTTGCAAGACCAAGAC
GGAGCAGGGGAGGAAGTATTGTCAGCGTTGTGCGTATCAGAAGAATGGTT
CGTCTTCTTTCTTTTTACTTTCTTCTTGTTGTTTCGTATGTTTGGAGTCA
TCTAGCTAACGCTGTGTAGCGTGTCCGATGTGCGGGAAGGGGTTGACGGG
GAGTGCGTCGAAGAATCAGCCTGCGATTTCGGGACAGAAGTTTAATTTGA
AGTAAAGTCATCAGTTAGCAGTCCTTTCGTTGAAGCTTCTAGATACCTAC
TTATGTCTATTACTACTATAACTGGGAAGAAATCTGCATGGCGTTCGGTT
CGGGATAGTCTTAGGAACAAGAAAGGTCTTCATTGC back to topCoding sequence (CDS) from alignment at ch6:4776892..4777727- >KJC3_009182-T1 ID=KJC3_009182-T1|Name=KJC3_009182-T1|organism=Aspergillus niger KJC3|type=CDS|length=1197bp|location=Sequence derived from alignment at ch6:4776892..4777727- (Aspergillus niger KJC3)
CGTGTCCGATGTGCGGGAAGGGGTTGACGGGGAGTGCGTCGAAGAATCAG
CCTGCGATTTCGGGACAGAAGTTTAATTTGAAGTAAAGCAAACTCCTCAG
TTCTAAAGCTAAGAATCCCTACGCGGCGTATGCTTCCTCCTGTGAGGTTT
GCAAGACCAAGACGGAGCAGGGGAGGAAGTATTGTCAGCGTTGTGCGTAT
CAGAAGAATGATGGTCTGCGCCAAATGCCAAAAGAAACTTAAACAAACGG
AGCTCGCCACTCCCGGCGTGAAACGCAAAGCAGAAATGTACTATGGCTCA
CCATCCACAACGCTCGGCGGTAGTAGCAATAGCAGTGGTGCTGCTTTTGC
CGGAGGGAAAGCCAAGTCTAGTACGTTGGGGAGTACGGGGGTTGGGAAGC
GTGTCCGATGTGCGGGAAGGGGTTGACGGGGAGTGCGTCGAAGAATCAGC
CTGCGATTTCGGGACAGAAGTTTAATTTGAAGTAAAGCAAACTCCTCAGT
TCTAAAGCTAAGAATCCCTACGCGGCGTATGCTTCCTCCTGTGAGGTTTG
CAAGACCAAGACGGAGCAGGGGAGGAAGTATTGTCAGCGTTGTGCGTATC
AGAAGAATGATGGTCTGCGCCAAATGCCAAAAGAAACTTAAACAAACGGA
GCTCGCCACTCCCGGCGTGAAACGCAAAGCAGAAATGTACTATGGCTCAC
CATCCACAACGCTCGGCGGTAGTAGCAATAGCAGTGGTGCTGCTTTTGCC
GGAGGGAAAGCCAAGTCTAGTACGTTGGGGAGTACGGGGGTTGGGAAGCG
TGTCCGATGTGCGGGAAGGGGTTGACGGGGAGTGCGTCGAAGAATCAGCC
TGCGATTTCGGGACAGAAGTTTAATTTGAAGTAAAGCAAACTCCTCAGTT
CTAAAGCTAAGAATCCCTACGCGGCGTATGCTTCCTCCTGTGAGGTTTGC
AAGACCAAGACGGAGCAGGGGAGGAAGTATTGTCAGCGTTGTGCGTATCA
GAAGAATGATGGTCTGCGCCAAATGCCAAAAGAAACTTAAACAAACGGAG
CTCGCCACTCCCGGCGTGAAACGCAAAGCAGAAATGTACTATGGCTCACC
ATCCACAACGCTCGGCGGTAGTAGCAATAGCAGTGGTGCTGCTTTTGCCG
GAGGGAAAGCCAAGTCTAGTACGTTGGGGAGTACGGGGGTTGGGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009182-T1.utr3p1 | KJC3_009182-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009182-T1.utr5p1 | KJC3_009182-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019367 |
| DBxref | PFAM:PF10235 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4776892..4777727 - |
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