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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4821314..4824154+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009198-T1 ID=KJC3_009198-T1|Name=KJC3_009198-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2841bp|location=Sequence derived from alignment at ch6:4821314..4824154+ (Aspergillus niger KJC3)
TCTTCTTTCCCCGTCCATCGCTGCCTCTCATCTGCTTGCTCGAACACCCC
AGTTCACCCAGTCTCCCTTCCTCGTGGCCCTTGGTCTCTTCTTCGTCGAC
CAACCAACTATCATCAACGAGGGTCTTCTCCCTTTCGCACTTCTCATCAT
CCGGTTGGACCCCCAGAACTTGGCCGAGCTTCCCCGCTCTCGCTGTCGCT
GCATGCCTTGTTGGCCTCAGGATCCCCCTCCGCTCCTCTTCCATCACGGC
CTCTTTCCATGCTTCCTCGTCTCTTCTACTTCGTCACCTCGCCTTCTTCC
TCTTTACTAGCTCTTTCGCCCTCCACTATCTCTTAATCAGCTTCTTCCTC
CTGAGTCTCCTTCATCAGAAACTCCGCGCTTCGCAGCTTCGGTCCAACTT
CACTGTCGGTGTCCTTATAATTCACCCGCTTGCCGTCCCTCCCGTTCATG
TGGCACGCCTGCTCGACGAAGTTTGGCTCCCAACACTCATCATCCGGGTC
GGTTAGTCCGTGATTGACAACTCCAACGCCTTCTGTGCGACCGGCTCTAT
TCTTTGTACTCAATCTTTGGCGATCTATCTCGGGTCTAGAGGCTGGCGCT
TCGCTGAGTCTGCTAGCCGGTCCGACGTCCTCCCCAGCCCCCTCCTCTAC
GTGTCTCCGGGCGTCGTCACCGGTTATTGAATGAATTCATTCGTCATGTC
TCTCCATACCTCCTATCATGCCGACTCGGATGCGGACGACGAGTACGAGC
GCAGCGTGATCACGTCCCCTCATCTGGCCACCGACTCCGAGGCCTCCCCT
TCCGAATCAGAATTCCCGTCAGCAGAGCATACCCCCACGACTTTGGCCAA
TGTCGACGACAATCCACGATCGCCTCGGACAATCATCACCGAATGGACCG
CTGAGGAATGCGCCAACTTCGTTGCCGCCCTTGGTCTTCGTCAATACTGC
GCCGCTTTTCTAGGTAAGTCCCCAAGGTATCAAAACAAAGGCGCTAAGGC
TTTCGGATCACTGACTGCGTGGTGTTTGTATTACAACAGAAAACGAAATC
GTTGGCGAAGCGCTCATCGCCCTGAAACATGATGAACTTAAGGAGATGGG
GATCGCGAGTGTGGGACATCGATTGACTATCTTGAAGAGTGTATACGAAA
CGAAGGTCAAGCAAGATATTCCGATTGACGCAGATCATTACATCCCACTG
TGTATGTCCACTGAATTTCTACTATGCAGGTGCTACCTGTAAATCGACTT
GCTAATGTGTCTTACATCGACAGCCGCGGACCAAAGTATGAACGAAACCG
CCACCCAGGACGATATTTCCCGGTTGATTCGGTCCATCCGCGTACGCGAT
GACCGTATTATGTCTATGGAGTCAGAGATGCGACGGATTGCAGAGGAATA
TCGTCGACTGCGCGAAGAGCTTCTTCCCGTGTTCAAGATGGCGAAAGACA
AGTCACAGCCGTTGCCCCCGCCTTCCTCTGTGCCAGGATCCGGCTCGGAG
GGATACCATGATGGGCCAACGCTCACATCTCCGTCCGGAATCACGCTCCT
GGATCGTTCTGGTAGTATTCTATCTCGGACGTTCTCCAAACGTGGCCACA
ATGGAGGCACTACTCCCAAGACCAACTCCCCTACCCACATTCCCCCGTCG
ATCCACGAGGGCCGCATGTACAGTGATGGGCTAGATCCGTCCACGGCAAA
TTCCTCCCACTTGACTATGCTGAATGGCAAGTCGCAATTATCTCCAGGCA
TTCCGTCCCCGACCTCTCCAGGCAATCAATACGCTCCACAGACCCTAGCC
TCCCGGGCATATACCCAACCGAGTTCTAGCAGCATAAACCACGTCTCGCA
TAACCACCACGACGATGCCACGGCGTCACAGTCGCGGCCAGACCGTCTGA
ACCCTACACCAACACAATCTACACGCCCCGACATTCCCACTCGTTCAGAC
TCAAGGGCGACTCAGGATCCACCGAGCGTGGAAATCTTCAAGTCCTTCCG
CGTGTCGATGGACGATCCATGCCACAAGGTTCTTCCGGCTGCGCTCAAGA
AGTATAACATCAACGCCGATTGGAAACAATATGCACTATACATTGTATAT
GGTGACCAAGAACGATGTCTTGGGCTCGAGGAACGACCACTCATCCTGTT
CAAACAGCTCGAAAAGGAAGGACGCAAGCCCATGTTCATGCTACGAAAGC
AGGTCCATCCCATCGATAGCGGCATGTATTCCGGGGGAGGATCTGCACCG
AATAGTGCTGGCTTTGAGGGACGACAGGCACAGATTAATCTGCCCGGCGG
CGTGCTGTGAGCAGCACACTGCAGCATCATTCTCGATGGAAGCATCATCA
CGTTTAATTGTTGCTTGAGATACCCCCCGGACCCTGACATGGGGTCGTTT
CATTCCTCTCATTCTTCTCGATCTTCTCTCAGACCATTTGTGCGGGCTTC
TGTCGTTGTCTCAATTCATATCATCATCATCATATCAGCGGTGTTACGGT
GTTGGGGATCCCGGAATAGGAAAAGCTCATAAATCAGCGTGGCATTTGTT
GGGTTTCTCTCTGCACTATTATCTCTTTCTACTTACCGGCTACCTTATGT
CTGAGTTCAACACATACTACTTACCATCTTAATTTCTCTGAATAAACTTC
TGTCTACATTTACTTCCAACTTGTCTGCTTCCGGGTCCATGCAGCATTCA
TAGTGAACTTGCACTTACCTATGTCCACTCCAAATATTCTCACGCATGTT
TTGAGAAATATAGGCATAGTATAGATAGACGGCTTACGTTCATCCTAGCA
TAGTTGCCCATCTAATTACAGTCACGACATGATATACTCAA back to topCoding sequence (CDS) from alignment at ch6:4821314..4824154+ >KJC3_009198-T1 ID=KJC3_009198-T1|Name=KJC3_009198-T1|organism=Aspergillus niger KJC3|type=CDS|length=4446bp|location=Sequence derived from alignment at ch6:4821314..4824154+ (Aspergillus niger KJC3)
ATGAATTCATTCGTCATGTCTCTCCATACCTCCTATCATGCCGACTCGGA
TGCGGACGACGAGTACGAGCGCAGCGTGATCACGTCCCCTCATCTGGCCA
CCGACTCCGAGGCCTCCCCTTCCGAATCAGAATTCCCGTCAGCAGAGCAT
ACCCCCACGACTTTGGCCAATGTCGACGACAATCCACGATCGCCTCGGAC
AATCATCACCGAATGGACCGCTGAGGAATGCGCCAACTTCGTTGCCGCCC
TTGGTCTTCGTCAATACTGCGCCGCTTTTCTAGAAAACGAAATCGTTGGC
GAAGCGCTCATCGCCCTGAAACATGATGAACTTAAGGAGATGGGGATCGC
GAGTGTGGGACATCGATTGACTATCTTGAAGAGTGTATACGAAACGAAGG
TCAAGCAAGATATTCCGATTGACGCAGATCATTACATCCCACTGTCCGCG
GACCAAAGTATGAACGAAACCGCCACCCAGGACGATATTTCCCGGTTGAT
TCGGTCCATCCGCGTACGCGATGACCGTATTATGTCTATGGAGTCAGAGA
TGCGACGGATTGCAGAGGAATATCGTCGACTGCGCGAAGAGCTTCTTCCC
GTGTTCAAGATGGCGAAAGACAAGTCACAGCCGTTGCCCCCGCCTTCCTC
TGTGCCAGGATCCGGCTCGGAGGGATACCATGATGGGCCAACGCTCACAT
CTCCGTCCGGAATCACGCTCCTGGATCGTTCTGGTAGTATTCTATCTCGG
ACGTTCTCCAAACGTGGCCACAATGGAGGCACTACTCCCAAGACCAACTC
CCCTACCCACATTCCCCCGTCGATCCACGAGGGCCGCATGTACAGTGATG
GGCTAGATCCGTCCACGGCAAATTCCTCCCACTTGACTATGCTGAATGGC
AAGTCGCAATTATCTCCAGGCATTCCGTCCCCGACCTCTCCAGGCAATCA
ATACGCTCCACAGACCCTAGCCTCCCGGGCATATACCCAACCGAGTTCTA
GCAGCATAAACCACGTCTCGCATAACCACCACGACGATGCCACGGCGTCA
CAGTCGCGGCCAGACCGTCTGAACCCTACACCAACACAATCTACACGCCC
CGACATTCCCACTCGTTCAGACTCAAGGGCGACTCAGGATCCACCGAGCG
TGGAAATCTTCAAGTCCTTCCGCGTGTCGATGGACGATCCATGCCACAAG
GTTCTTCCGGCTGCGCTCAAGAAGTATAACATCAACGCCGATTGGAAACA
ATATGCACTATACATTGTATATGGTGACCAAGAACGATGTCTTGGGCTCG
AGGAACGACCACTCATCCTGTTCAAACAGCTCGAAAAGGAAGGACGCAAG
CCCATGTTCATGCTACGAAAGCAGGTCCATCCCATCGATAGCGGCATGTA
TTCCGGGGGAGGATCTGCACCGAATAGTGCTGGCTTTGAGGGACGACAGG
CACAGATTAATCTGCCCGGCGGCGTGCTGTGAATGAATTCATTCGTCATG
TCTCTCCATACCTCCTATCATGCCGACTCGGATGCGGACGACGAGTACGA
GCGCAGCGTGATCACGTCCCCTCATCTGGCCACCGACTCCGAGGCCTCCC
CTTCCGAATCAGAATTCCCGTCAGCAGAGCATACCCCCACGACTTTGGCC
AATGTCGACGACAATCCACGATCGCCTCGGACAATCATCACCGAATGGAC
CGCTGAGGAATGCGCCAACTTCGTTGCCGCCCTTGGTCTTCGTCAATACT
GCGCCGCTTTTCTAGAAAACGAAATCGTTGGCGAAGCGCTCATCGCCCTG
AAACATGATGAACTTAAGGAGATGGGGATCGCGAGTGTGGGACATCGATT
GACTATCTTGAAGAGTGTATACGAAACGAAGGTCAAGCAAGATATTCCGA
TTGACGCAGATCATTACATCCCACTGTCCGCGGACCAAAGTATGAACGAA
ACCGCCACCCAGGACGATATTTCCCGGTTGATTCGGTCCATCCGCGTACG
CGATGACCGTATTATGTCTATGGAGTCAGAGATGCGACGGATTGCAGAGG
AATATCGTCGACTGCGCGAAGAGCTTCTTCCCGTGTTCAAGATGGCGAAA
GACAAGTCACAGCCGTTGCCCCCGCCTTCCTCTGTGCCAGGATCCGGCTC
GGAGGGATACCATGATGGGCCAACGCTCACATCTCCGTCCGGAATCACGC
TCCTGGATCGTTCTGGTAGTATTCTATCTCGGACGTTCTCCAAACGTGGC
CACAATGGAGGCACTACTCCCAAGACCAACTCCCCTACCCACATTCCCCC
GTCGATCCACGAGGGCCGCATGTACAGTGATGGGCTAGATCCGTCCACGG
CAAATTCCTCCCACTTGACTATGCTGAATGGCAAGTCGCAATTATCTCCA
GGCATTCCGTCCCCGACCTCTCCAGGCAATCAATACGCTCCACAGACCCT
AGCCTCCCGGGCATATACCCAACCGAGTTCTAGCAGCATAAACCACGTCT
CGCATAACCACCACGACGATGCCACGGCGTCACAGTCGCGGCCAGACCGT
CTGAACCCTACACCAACACAATCTACACGCCCCGACATTCCCACTCGTTC
AGACTCAAGGGCGACTCAGGATCCACCGAGCGTGGAAATCTTCAAGTCCT
TCCGCGTGTCGATGGACGATCCATGCCACAAGGTTCTTCCGGCTGCGCTC
AAGAAGTATAACATCAACGCCGATTGGAAACAATATGCACTATACATTGT
ATATGGTGACCAAGAACGATGTCTTGGGCTCGAGGAACGACCACTCATCC
TGTTCAAACAGCTCGAAAAGGAAGGACGCAAGCCCATGTTCATGCTACGA
AAGCAGGTCCATCCCATCGATAGCGGCATGTATTCCGGGGGAGGATCTGC
ACCGAATAGTGCTGGCTTTGAGGGACGACAGGCACAGATTAATCTGCCCG
GCGGCGTGCTGTGAATGAATTCATTCGTCATGTCTCTCCATACCTCCTAT
CATGCCGACTCGGATGCGGACGACGAGTACGAGCGCAGCGTGATCACGTC
CCCTCATCTGGCCACCGACTCCGAGGCCTCCCCTTCCGAATCAGAATTCC
CGTCAGCAGAGCATACCCCCACGACTTTGGCCAATGTCGACGACAATCCA
CGATCGCCTCGGACAATCATCACCGAATGGACCGCTGAGGAATGCGCCAA
CTTCGTTGCCGCCCTTGGTCTTCGTCAATACTGCGCCGCTTTTCTAGAAA
ACGAAATCGTTGGCGAAGCGCTCATCGCCCTGAAACATGATGAACTTAAG
GAGATGGGGATCGCGAGTGTGGGACATCGATTGACTATCTTGAAGAGTGT
ATACGAAACGAAGGTCAAGCAAGATATTCCGATTGACGCAGATCATTACA
TCCCACTGTCCGCGGACCAAAGTATGAACGAAACCGCCACCCAGGACGAT
ATTTCCCGGTTGATTCGGTCCATCCGCGTACGCGATGACCGTATTATGTC
TATGGAGTCAGAGATGCGACGGATTGCAGAGGAATATCGTCGACTGCGCG
AAGAGCTTCTTCCCGTGTTCAAGATGGCGAAAGACAAGTCACAGCCGTTG
CCCCCGCCTTCCTCTGTGCCAGGATCCGGCTCGGAGGGATACCATGATGG
GCCAACGCTCACATCTCCGTCCGGAATCACGCTCCTGGATCGTTCTGGTA
GTATTCTATCTCGGACGTTCTCCAAACGTGGCCACAATGGAGGCACTACT
CCCAAGACCAACTCCCCTACCCACATTCCCCCGTCGATCCACGAGGGCCG
CATGTACAGTGATGGGCTAGATCCGTCCACGGCAAATTCCTCCCACTTGA
CTATGCTGAATGGCAAGTCGCAATTATCTCCAGGCATTCCGTCCCCGACC
TCTCCAGGCAATCAATACGCTCCACAGACCCTAGCCTCCCGGGCATATAC
CCAACCGAGTTCTAGCAGCATAAACCACGTCTCGCATAACCACCACGACG
ATGCCACGGCGTCACAGTCGCGGCCAGACCGTCTGAACCCTACACCAACA
CAATCTACACGCCCCGACATTCCCACTCGTTCAGACTCAAGGGCGACTCA
GGATCCACCGAGCGTGGAAATCTTCAAGTCCTTCCGCGTGTCGATGGACG
ATCCATGCCACAAGGTTCTTCCGGCTGCGCTCAAGAAGTATAACATCAAC
GCCGATTGGAAACAATATGCACTATACATTGTATATGGTGACCAAGAACG
ATGTCTTGGGCTCGAGGAACGACCACTCATCCTGTTCAAACAGCTCGAAA
AGGAAGGACGCAAGCCCATGTTCATGCTACGAAAGCAGGTCCATCCCATC
GATAGCGGCATGTATTCCGGGGGAGGATCTGCACCGAATAGTGCTGGCTT
TGAGGGACGACAGGCACAGATTAATCTGCCCGGCGGCGTGCTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007165 | signal transduction |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009198-T1.utr5p1 | KJC3_009198-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009198-T1.utr3p1 | KJC3_009198-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263CAC |
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR013761 |
| DBxref | InterPro:IPR001660 |
| DBxref | InterPro:IPR000159 |
| DBxref | PFAM:PF07647 |
| DBxref | PFAM:PF00536 |
| DBxref | PFAM:PF00788 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4821314..4824154 + |
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