|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4825015..4829960- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009199-T1 ID=KJC3_009199-T1|Name=KJC3_009199-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4946bp|location=Sequence derived from alignment at ch6:4825015..4829960- (Aspergillus niger KJC3)
GTGGCAGGGAGAGAGAGAGAGAGGAAAAAGAGTTATTCGCACCATTCCCC
GCCCGGTCTGATCCGCGCTTTCTGATTCCTTCGCCCCGTCGCTTTCCTGC
GTAATCGCTTTCGTTACGTTTCGGTGCTGGGCTGCATCCAGTGTCCCCCC
CCCAACCTTCGCATCAAATCAAGCGTCACGATGCCGCTCGGGCACTGGGT
CTCGGGCTTGGTTGTGGTCTTGGTATCCCTATCGCCTTCATAAAGGAAAT
TTCCGGTCTTCTGGTCCCGGCCATTCGCCAGCCTTTGCCCAGACGCCCAG
TCGTTCTTGGTTTTTTCTTGTCCCTCCACGCGCTCTCTCTGCCTTGGTGT
TGCTGGTCCTGCGCTGGGCTGAGAAACCTTGGAGCTCTCTCTTTCCCCGT
CTCTCTACTTCTCCCGCCCTTTCTTTTCTTGGGACACCTTTCCTCCTACT
TACTCCTCCATAACTCCCCGGTCTTTTCACCTCATCTGACCGCACCCCTC
TCACCTTTTTTTTTTGTTACTCTCTATCTTGGTATTCTCCTTCTTGAGCG
TTTCCTTTTCTGGCGGAGTCGGTCAACATATTATCGGAGATCATCCGGAT
AAACCATCCATTGCCTCTTCTGGTAAGCCCGGAACCTCTCTCTCACTCCC
ACCTTCATAGTCTACCTTCTCTCTCGATAGTTACACGGACCAACTCTTTT
TCCTTTTTTTTCCTCCCTTCTGCTACCATCCCTTTTTCTTCCTTTTCCCC
GGAACTTATCTCACGTCCAGCGCTCACCTAGGCATCTCTTTCCCCCCCCT
TGCAGGACGCACCCGCGACGCCCTTGGAACAACCGCGCCGCCTGCCCCCT
CCCTATCCTCCTCCGACCTCGCCTATTCTCCGCGGCGTCCGTCGCCTTCA
GCTCGGTCCGCGTTTCCTGATCCCCCGAGGTATGCGGGAACCCGGCGCGT
TGGTCAACTTTTGAGGTGGATCTCCCTTGCTTGATTGCGCATTGGTCCGA
TCGGTGGAGGTATACCCGGGATTTACGGTGCCTGGTGCAAGGCTATATCG
GGGTGAAGATCACGGGCTGCGCGGGGAGGAATTAAATCAAGCCATCCCGC
AGCTCGAGCAAGCGCCCGCCGCACGACCGCTGTAGTAGTTCCCGGACCCT
CCGTCCGCCCGTCGCAACCATGGCGTGGGATCATTTGGACATCGACAAGC
CGCATCTGGCTTACATGATTCTGGGTGGCTTTACCAGTCTGTTCATGCTG
TGCTCTTTGTTCGTCAAGGAGAAGCTCTACATCGGTGAAGCCACCGTTGC
TACCCTTTGCGGTATCATTTTCGGGCCTCATGCGGCCAACCTGTTCAATC
CCAACTCGTGGGGCAATGTCGACAAGATCACCCTCGAGTGCTCTCGTATC
GTCTTGGTCGTCCAGTGTTTCGCCGTCGGCGTCGAGTTGCCCAAAGCGTA
CATGGAACGTCACTGGAAATCCGTCTTTCTGCTGCTGGTGCCCGTCATGA
CCTGGGGCTGGCTGGTGACCAGTCTCTTTATCTGGTGGATGGTGCCTCCC
CTCTCTTGGCTGGAGAGTCTCGTGTGCGCCGCGTGCGTCACCGCCACGGA
CCCCGTCTTGGCCTCGTCCGTCGTAGGTAAAGGTAAATTCGCGCGACGGG
TTCCCAAGCACTTGAGAGACTTGTTGTCTGCCGAGTCGGGCTGCAACGAT
GGCATGGCCTTCCCCTTCATTTACCTGGGATTCTACATCTGGCGCTACCG
CCCCAATGCCGGGGAGGTGTCGCTCAACTGGTTCTGCATTACCATCCTCT
ACGAGTGCGTCTTCGGCGCAATCTTTGGCTTCGTCATCGGCTACCTCGCG
CGTCATTCGATCAAATTCGCCGAGCGCAAGGGCTTGATTGACCGTGAGAG
TTTCCTGGTCTTCTACTTCGTGCTCGCCGTTTTCTGCGCCGGCTCAGGCA
GTCTGCTGGGCATGGACGACCTTCTGATAGGCTTCTCGGCCGGCGTCGGC
TTCAGTAACGATGGTTGGTTTACAGAGAAAACAGAAGAATCGCACGTGTC
TAACGTCATCGATCTCCTGCTCAACTTGGCCTACTTTGTCTATTTCGGAG
CCATCGTCCCCTGGGAGGACTACAACAACCCGGACATCGGCCTTGTGCCC
TGGCGGCTCGTAGTCATTGCCATCCTTGTCATCTTCTTCCGCCGCATCCC
GATCATGTTGATGCTGAAACCTATCATTCCGGATGTGAAAACGTGGCGCG
AGGCCCTGTTTGCCGGCCACTTCGGCCCCATTGGTGTCGGCGCAATCTTC
GCTTCTATCCTGGCCCGGGCTGAGCTAGAATCAGACAGCACCGAGCCCTG
GTCCGAGTCGGACTTGCCGGGTCCGGGCAGTCATAATTACTATATCATCC
AGCTGATTTGGCCCGTCACCACCTTCATGGTCATCTCCTCGATCCTGGTC
CATGGTTCGTCCATTGCCGTGTTTACGTTAGGAAAGCGCATCAACACCTT
GACCATCACGCTGTCCTACACCACCGCCAACGAGGAGGGTCCTTCCTGGA
TGAACCGCTTGCCTCGCGTGCAATCTCTTGCTAAAGGTTCCATGTCGTTC
CGGAAACCGGATGAGGACGAATCTTCGAATGAACCGGAATATCCTCCAGG
GACGCTGCCCCCCATTGGTGTGCCAGGCAACTTCCTGCGTCGGGTTCGCG
ACGAAGATACGGAGTCAACGGGTGGTAGATCTGCACGGAGGCGCCGCAGA
CGTCGCAGACGCACCGACGGCGCCGGTGGCCCGATCAGTCAGTCAGCTAT
TGCCCCTCAACGCCCACTGGAGACGGAGTCGGATGAGCAAAAGGAAAAGA
GCGATGAATCCAGGGAGCGCGACAAGATCGAACGCGAGGCTTCCCCGCCC
TCCAAGGAAGCCGATAAGTTTGGACGCGAGCCTGCGCTCGAGGTTTATCT
GGAAGGTCACAACATGGTCATGGAAGATGAAGAAGGCAACGTTCTCAAGG
TTGAGGATATCAGTCATATGTCCACCGAGGAGCAACAGCGTCATATGGAA
GAACAACGCCAGAAGTTGCAGCAACAATCGGATGAATACGCCAAATCGCG
CAGCCAGCCTCATGGCAAGACTGAAGGAGAGGAGATTGAGCAGGCCATTG
GCGAAAAGACCGGACACCCGCTGGATAAGGCTCGCAAGCGTTTTGGCCAG
TGGATTGGGCTTGGGAAGGGTCGTGCTGAGGACCAAGAGGCCAAGGAGGC
CAAACAGACTGATGAGAAGAAGAAGGCTGAGGAAGCATCGAGAAAGCCAG
CCAAGGCCAAAGGTCGCTCCGCTCACGCCTACCAATTCGGCAACACCATC
ATCGTTGAGGACGAAGATGGAGAAGTTATCAAGAAGTATTCCATTCCTTC
CGGGGATAAACCTGAGACGGATGCTCCTGTTCGTCGCGGACTGACAAGAA
TGGGCACGTGGTTCGGCATGGAAGAGGAGGGCGAGTCATCCCAGGCCGCC
CGCAAGGCTGCTCAAGACGACTGGCTGGCGGATGATGGTCTGCGTTTCAC
CCTGGCTGATGACAATGATGTCGGCAAGAGAGGCGTCGAGCACAAGGGTC
GCCGCATGACCAAGCATGAATTTGCTCAACAGATCCGTAACCTTGGTCCC
AAAGCACGTCGTGATGTGGTCGAAGAGACCGACGCCCCCGAACGGGTAAA
GAAGGTGGCTCGCGAGGAGGCTCAGAAGGCTGAATCGCAAGAGCGCCGCC
GATCAGACCCCGGAGTGGCTTCGCGGCCTGCCCCTGCCCCCGTCGCAGAG
GATGACGAATCCGGCACCGGAAGCGAATTCACGGACGACGAATCGGACGT
GGAAGTGCCCGGCGACATTGCCGCTTCGTTGGCACGGTTCACACGTGGCA
CAGCAGCCGAAGAGCGTCGCAGTTCCCACCTCAGTCCTACATCCACGTCT
CCGAAATCGCGTCCCCGGTCACGACGGGATTCCGATGATGATGGCACGGA
ACGTATTCCGCCCGCCCAACTTCGCGAAGCGGCCGGACTCACTCGTCCTC
CCCAGCAAGCGGACTTGGATGACACAGGTGAAACGCCAGCGGAACGCCGT
CGTCGTCTGGCTGCACTTGGTGAAATCAATGACTCGGAGGATTCTGACGA
TCCGGATGCTCTTCTAGAAGACACGGATGATGAGGGCAATGATACTGAGG
CGAAGGTCTCCTTTGCCGACGGCACGAAGCCCCCAACCAGCAGACAACAG
TCGGGAGAAAACTCCAGTGAGGGACAAGAGAATAATTCTCCATACAACCG
ACACAGTCGCAGTCAGAGCCGACGGAGCATCTCCTGGGGCGGCGAGAAGG
GCCGTGAAAATTAAGACAAAATCGCAAAATATGCAGCGAACACAGAGTGA
GGGGAAAAGTGAACTTTGGGCAGTGAAGCTGAAAGGGAATTCTTTCAAAG
GAGAAATAATATAAGAGCCCAAGGAAAGGAGGGGGGGAAGGAAATAAAAG
GGGAGGGCGGTGAAACCAACGCAACCTTGCGGTGTAGAAAGCTCTTCTTT
TCTACTGAGCCAAGAATCAGCAGGTCCTTCCTAGAGCTCGGTTATGGGTT
TGCTTGTTCTTGAGCATCTGGAGTTCGTTTTGCATGCATGGCTGGATGCG
ATCATGTATAGAGCGCGCTTTCACTTTTTTGTGTAACTACTTTTACCCTT
TTACTTGCATTTGTTTGTCCCACCGCCTGCTGGTGCCCCGCGCTGTGCAA
CCCGGCCAGCTCAGCCCAGCTGCCTCTTGTTGTTGTGTACTGTGGATCAG
TACTATTGCTACTGTTATTGACTGATAGAATGATGGATGGGATGGATTGG
CTGACATATGGTGCCTACGCCTAGCACCATGATTTTGTAATGGGTACGAA
GTACATATAAGTACATATATGATATAGTATATTATTTTCTTCAGAG back to topCoding sequence (CDS) from alignment at ch6:4825015..4829960- >KJC3_009199-T1 ID=KJC3_009199-T1|Name=KJC3_009199-T1|organism=Aspergillus niger KJC3|type=CDS|length=3195bp|location=Sequence derived from alignment at ch6:4825015..4829960- (Aspergillus niger KJC3)
ATGGCGTGGGATCATTTGGACATCGACAAGCCGCATCTGGCTTACATGAT
TCTGGGTGGCTTTACCAGTCTGTTCATGCTGTGCTCTTTGTTCGTCAAGG
AGAAGCTCTACATCGGTGAAGCCACCGTTGCTACCCTTTGCGGTATCATT
TTCGGGCCTCATGCGGCCAACCTGTTCAATCCCAACTCGTGGGGCAATGT
CGACAAGATCACCCTCGAGTGCTCTCGTATCGTCTTGGTCGTCCAGTGTT
TCGCCGTCGGCGTCGAGTTGCCCAAAGCGTACATGGAACGTCACTGGAAA
TCCGTCTTTCTGCTGCTGGTGCCCGTCATGACCTGGGGCTGGCTGGTGAC
CAGTCTCTTTATCTGGTGGATGGTGCCTCCCCTCTCTTGGCTGGAGAGTC
TCGTGTGCGCCGCGTGCGTCACCGCCACGGACCCCGTCTTGGCCTCGTCC
GTCGTAGGTAAAGGTAAATTCGCGCGACGGGTTCCCAAGCACTTGAGAGA
CTTGTTGTCTGCCGAGTCGGGCTGCAACGATGGCATGGCCTTCCCCTTCA
TTTACCTGGGATTCTACATCTGGCGCTACCGCCCCAATGCCGGGGAGGTG
TCGCTCAACTGGTTCTGCATTACCATCCTCTACGAGTGCGTCTTCGGCGC
AATCTTTGGCTTCGTCATCGGCTACCTCGCGCGTCATTCGATCAAATTCG
CCGAGCGCAAGGGCTTGATTGACCGTGAGAGTTTCCTGGTCTTCTACTTC
GTGCTCGCCGTTTTCTGCGCCGGCTCAGGCAGTCTGCTGGGCATGGACGA
CCTTCTGATAGGCTTCTCGGCCGGCGTCGGCTTCAGTAACGATGGTTGGT
TTACAGAGAAAACAGAAGAATCGCACGTGTCTAACGTCATCGATCTCCTG
CTCAACTTGGCCTACTTTGTCTATTTCGGAGCCATCGTCCCCTGGGAGGA
CTACAACAACCCGGACATCGGCCTTGTGCCCTGGCGGCTCGTAGTCATTG
CCATCCTTGTCATCTTCTTCCGCCGCATCCCGATCATGTTGATGCTGAAA
CCTATCATTCCGGATGTGAAAACGTGGCGCGAGGCCCTGTTTGCCGGCCA
CTTCGGCCCCATTGGTGTCGGCGCAATCTTCGCTTCTATCCTGGCCCGGG
CTGAGCTAGAATCAGACAGCACCGAGCCCTGGTCCGAGTCGGACTTGCCG
GGTCCGGGCAGTCATAATTACTATATCATCCAGCTGATTTGGCCCGTCAC
CACCTTCATGGTCATCTCCTCGATCCTGGTCCATGGTTCGTCCATTGCCG
TGTTTACGTTAGGAAAGCGCATCAACACCTTGACCATCACGCTGTCCTAC
ACCACCGCCAACGAGGAGGGTCCTTCCTGGATGAACCGCTTGCCTCGCGT
GCAATCTCTTGCTAAAGGTTCCATGTCGTTCCGGAAACCGGATGAGGACG
AATCTTCGAATGAACCGGAATATCCTCCAGGGACGCTGCCCCCCATTGGT
GTGCCAGGCAACTTCCTGCGTCGGGTTCGCGACGAAGATACGGAGTCAAC
GGGTGGTAGATCTGCACGGAGGCGCCGCAGACGTCGCAGACGCACCGACG
GCGCCGGTGGCCCGATCAGTCAGTCAGCTATTGCCCCTCAACGCCCACTG
GAGACGGAGTCGGATGAGCAAAAGGAAAAGAGCGATGAATCCAGGGAGCG
CGACAAGATCGAACGCGAGGCTTCCCCGCCCTCCAAGGAAGCCGATAAGT
TTGGACGCGAGCCTGCGCTCGAGGTTTATCTGGAAGGTCACAACATGGTC
ATGGAAGATGAAGAAGGCAACGTTCTCAAGGTTGAGGATATCAGTCATAT
GTCCACCGAGGAGCAACAGCGTCATATGGAAGAACAACGCCAGAAGTTGC
AGCAACAATCGGATGAATACGCCAAATCGCGCAGCCAGCCTCATGGCAAG
ACTGAAGGAGAGGAGATTGAGCAGGCCATTGGCGAAAAGACCGGACACCC
GCTGGATAAGGCTCGCAAGCGTTTTGGCCAGTGGATTGGGCTTGGGAAGG
GTCGTGCTGAGGACCAAGAGGCCAAGGAGGCCAAACAGACTGATGAGAAG
AAGAAGGCTGAGGAAGCATCGAGAAAGCCAGCCAAGGCCAAAGGTCGCTC
CGCTCACGCCTACCAATTCGGCAACACCATCATCGTTGAGGACGAAGATG
GAGAAGTTATCAAGAAGTATTCCATTCCTTCCGGGGATAAACCTGAGACG
GATGCTCCTGTTCGTCGCGGACTGACAAGAATGGGCACGTGGTTCGGCAT
GGAAGAGGAGGGCGAGTCATCCCAGGCCGCCCGCAAGGCTGCTCAAGACG
ACTGGCTGGCGGATGATGGTCTGCGTTTCACCCTGGCTGATGACAATGAT
GTCGGCAAGAGAGGCGTCGAGCACAAGGGTCGCCGCATGACCAAGCATGA
ATTTGCTCAACAGATCCGTAACCTTGGTCCCAAAGCACGTCGTGATGTGG
TCGAAGAGACCGACGCCCCCGAACGGGTAAAGAAGGTGGCTCGCGAGGAG
GCTCAGAAGGCTGAATCGCAAGAGCGCCGCCGATCAGACCCCGGAGTGGC
TTCGCGGCCTGCCCCTGCCCCCGTCGCAGAGGATGACGAATCCGGCACCG
GAAGCGAATTCACGGACGACGAATCGGACGTGGAAGTGCCCGGCGACATT
GCCGCTTCGTTGGCACGGTTCACACGTGGCACAGCAGCCGAAGAGCGTCG
CAGTTCCCACCTCAGTCCTACATCCACGTCTCCGAAATCGCGTCCCCGGT
CACGACGGGATTCCGATGATGATGGCACGGAACGTATTCCGCCCGCCCAA
CTTCGCGAAGCGGCCGGACTCACTCGTCCTCCCCAGCAAGCGGACTTGGA
TGACACAGGTGAAACGCCAGCGGAACGCCGTCGTCGTCTGGCTGCACTTG
GTGAAATCAATGACTCGGAGGATTCTGACGATCCGGATGCTCTTCTAGAA
GACACGGATGATGAGGGCAATGATACTGAGGCGAAGGTCTCCTTTGCCGA
CGGCACGAAGCCCCCAACCAGCAGACAACAGTCGGGAGAAAACTCCAGTG
AGGGACAAGAGAATAATTCTCCATACAACCGACACAGTCGCAGTCAGAGC
CGACGGAGCATCTCCTGGGGCGGCGAGAAGGGCCGTGAAAATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015385 | sodium:proton antiporter activity |
| GO:0015299 | solute:proton antiporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006814 | sodium ion transport |
| GO:0006812 | cation transport |
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009199-T1.utr3p1 | KJC3_009199-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013928 |
| DBxref | InterPro:IPR038770 |
| DBxref | InterPro:IPR006153 |
| DBxref | PFAM:PF08619 |
| DBxref | PFAM:PF00999 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4825015..4829960 - |
|
